mRNA_H-canaliculatus_F_contig12453.2083.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12453.2083.1
Unique NamemRNA_H-canaliculatus_F_contig12453.2083.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: D8LCJ1_ECTSI (Armadillo/beta-catenin-like repeat domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ1_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 5.520e-111
Identity = 182/214 (85.05%), Postives = 184/214 (85.98%), Query Frame = 1 
Query:   91 VEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            VEALWALTNIAAGA DHAQVLTNSGAVPPLVVLLDSPNEEVLEQ                             RCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPAL+KLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNR+IQKE
Sbjct:    8 VEALWALTNIAAGAPDHAQVLTNSGAVPPLVVLLDSPNEEVLEQALWLLGNLAGEGAAARDAVLAVDALPPLVRCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPALSKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKE 221
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A7S2R949_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R949_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.990e-100
Identity = 161/244 (65.98%), Postives = 187/244 (76.64%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            RE LI+E LER+WVPLL+GWL  +  PAVQVEALWALTNIAAG  +H  VL   GAV  LV LL SPNEEVLEQ                             +CL+R   S S+L+IGSWTLSNLCDGQPRP +D++ ++P LAKLLQ+ D+E+LSHTCWAXXXXX G S+HI+AVV+AD+CWRLV+LL HRSWRVTKPALRTIGNIVCAEDDTDYTQHII+AGAVPCL++LIAHSNR+IQKE
Sbjct:  101 RELLIQEVLERNWVPLLLGWLQLNHNPAVQVEALWALTNIAAGTAEHTHVLLKHGAVSTLVNLLSSPNEEVLEQAMWVLGNLAGEGTPARDEVLKGNALKPLAKCLQRQGCSLSMLRIGSWTLSNLCDGQPRPAVDIYALLPVLAKLLQNVDAEVLSHTCWAXXXXXDGPSSHIKAVVEADVCWRLVQLLMHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIEAGAVPCLRELIAHSNREIQKE 344
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: H3G600_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3G600_PHYRM)

HSP 1 Score: 277 bits (709), Expect = 1.100e-88
Identity = 143/245 (58.37%), Postives = 170/245 (69.39%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ                               L++    R SLL+I +WT+SNLCDGQPRPV D+  ++P LAK+L  TD+EILSH CWA      G STHI+AVVD+D+C+RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:   31 RDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSSNEEVLEQSVWVLGNLAGEGAATRDLVLSAGALTPLVNNLKKTSWDRLSLLRILTWTISNLCDGQPRPVFDIGLILPYLAKMLTSTDTEILSHVCWAFSHLCDGPSTHIQAVVDSDVCFRLVELLSHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 275
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A6A3UE13_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UE13_9STRA)

HSP 1 Score: 276 bits (705), Expect = 1.150e-87
Identity = 169/245 (68.98%), Postives = 197/245 (80.41%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ  XXXXXXXXXXXXXXXXXXXXXXXXXXX  L++    R SLL+I +WT+SNLCDGQPRPV D+  ++P LAK+L  TD+EILSH CWA      G STHI+AVVD+D+C+RLV+LL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:  185 RDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSTNEEVLEQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLKKTSWDRLSLLRILTWTISNLCDGQPRPVFDIGLILPYLAKMLTSTDTEILSHVCWAFSHLCDGPSTHIQAVVDSDVCFRLVKLLSHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 429
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A835Z8E3_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E3_9STRA)

HSP 1 Score: 286 bits (731), Expect = 8.930e-87
Identity = 142/244 (58.20%), Postives = 170/244 (69.67%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            RE LI E ++R+WVPLL+GWL  D  P +Q++ALWALTNIAAG  +HAQVL   G+VP LV LL SPN EV+EQ                             RCL+ +    SL +IGSW LSNL DGQPRP +DV  V+P L++LL+  D E+LSHTCWA      G S HI+AVVDA+IC RLV+LL HRSWRVTKPALRTIGNIVCAED+ DYTQ+I+DAGAVPCL+QLI HS R++QKE
Sbjct:  159 RERLIEEVMDRNWVPLLIGWLWLDQSPGLQMDALWALTNIAAGRAEHAQVLMKHGSVPALVHLLSSPNREVVEQSLWVLGNVAGEGTTARDAVLAAGTLTPLVRCLDANAPHLSLCRIGSWVLSNLFDGQPRPQVDVAAVLPTLSRLLRSADGEVLSHTCWALSHLCDGPSVHIKAVVDAEICQRLVDLLLHRSWRVTKPALRTIGNIVCAEDEVDYTQYIMDAGAVPCLRQLITHSTREVQKE 402
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A067CNS0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNS0_SAPPC)

HSP 1 Score: 278 bits (711), Expect = 2.400e-86
Identity = 168/245 (68.57%), Postives = 198/245 (80.82%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL     P +QVEALWALTNIAAGATD+  VL N+G +P LV LLDSPNEEVLEQ  XXXXXXXXXXXXXXXXXXXXXXXXXXX  L++    + SLL+I +WTLSNLCDGQPRPV D++ V+P+L K+L  +D+E+LSH CWA      G STHI+AVVD+++C RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:   65 RDLLIRQMLEKNWTPRLISWLKLKDHPLLQVEALWALTNIAAGATDNTSVLLNNGVIPTLVSLLDSPNEEVLEQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKKAPPEKLSLLRILTWTLSNLCDGQPRPVFDINLVLPSLGKMLASSDTEVLSHVCWAFSHLCDGPSTHIQAVVDSEVCLRLVELLSHNSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRKLIAHSNREIQKE 309
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: D0NSN0_PHYIT (Importin subunit alpha, putative n=13 Tax=Peronosporaceae TaxID=4777 RepID=D0NSN0_PHYIT)

HSP 1 Score: 277 bits (709), Expect = 9.880e-85
Identity = 143/245 (58.37%), Postives = 170/245 (69.39%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ                               L++    R SLL+I +WT+SNLCDGQPRPV D+  ++P LAK+L  TD+EILSH CWA      G STHI+AVVD+D+C+RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:  194 RDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSSNEEVLEQSVWVLGNLAGEGAATRDLVLSAGALTPLVNNLKKTSWDRLSLLRILTWTISNLCDGQPRPVFDIGLILPYLAKMLTSTDTEILSHVCWAFSHLCDGPSTHIQAVVDSDVCFRLVELLSHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 438
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A8K1FCS8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCS8_PYTOL)

HSP 1 Score: 276 bits (705), Expect = 3.540e-84
Identity = 171/245 (69.80%), Postives = 198/245 (80.82%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ XXXXXXXXXXXXXXXXXXXXXXXXXXXX  L++    R SLL+I +WTLSNLCDGQPRPV D+  ++P LAK+L  TD+EILSH CWA      G S+HI+AVVD+D+C+RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:  192 RDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSSNEEVLEQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLKKTPWDRLSLLRILTWTLSNLCDGQPRPVFDITIILPYLAKMLTSTDTEILSHVCWAFSHLCDGPSSHIQAVVDSDVCFRLVELLSHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 436
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BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A5D6XQB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQB3_9STRA)

HSP 1 Score: 276 bits (706), Expect = 3.560e-84
Identity = 147/245 (60.00%), Postives = 175/245 (71.43%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSRS-LLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ L+++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ                               L++    RS LL+I +WTLSNLCDGQPRPV D+  ++P+LAK+L   D+EILSH CWAXXXXX G STHI+AVVD+D+C+RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:  148 RDLLIRQMLDKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSSNEEVLEQSVWVLGNLAGEGSATRDLVLNAGALVPLVNNLKKTPADRSSLLRILTWTLSNLCDGQPRPVFDISIILPSLAKMLTSADTEILSHVCWAXXXXXDGPSTHIQAVVDSDVCFRLVELLGHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 392
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Match: A0A484E1V0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1V0_BRELC)

HSP 1 Score: 275 bits (702), Expect = 9.560e-84
Identity = 141/245 (57.55%), Postives = 171/245 (69.80%), Query Frame = 1 
Query:    1 REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQVLTNSGAVPPLVVLLDSPNEEVLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCLERHQGSR-SLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQHTDSEILSHTCWAXXXXXXGLSTHIRAVVDADICWRLVELLKHRSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKE 732
            R+ LIR+ LE++W P L+ WL    RP +QVEALWALTNIAAGATD+  VL  +G +P LV LLDS NEEVLEQ                               L++    R SLL+I +WT+SNLCDGQPRPV ++  ++P+LAK+L  TD+EILSH CWA      G STHI+AVVD+++C+RLVELL H SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNR+IQKE
Sbjct:  191 RDLLIRQMLEKNWTPRLIQWLRLRDRPTLQVEALWALTNIAAGATDNTSVLLQNGVIPTLVSLLDSSNEEVLEQSVWVLGNLAGEGAATRDLVLSAGALTPLVINLKKTSWDRLSLLRILTWTISNLCDGQPRPVFEIAVILPSLAKMLTSTDTEILSHVCWAFSHLCDGPSTHIQAVVDSEVCFRLVELLSHSSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKE 435
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12453.2083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCJ1_ECTSI5.520e-11185.05Armadillo/beta-catenin-like repeat domain containi... [more]
A0A7S2R949_9STRA1.990e-10065.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3G600_PHYRM1.100e-8858.37Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A6A3UE13_9STRA1.150e-8768.98Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A835Z8E3_9STRA8.930e-8758.20Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A067CNS0_SAPPC2.400e-8668.57Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
D0NSN0_PHYIT9.880e-8558.37Importin subunit alpha, putative n=13 Tax=Peronosp... [more]
A0A8K1FCS8_PYTOL3.540e-8469.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XQB3_9STRA3.560e-8460.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484E1V0_BRELC9.560e-8457.55Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12453contigH-canaliculatus_F_contig12453:606..3134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2.2e-94
Seed eggNOG ortholog2880.D8LCJ1
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionarmadillo/beta-catenin-like repeat domain containing protein
Ec32 orthologEc-03_002730.1
Exons4
Model size738
Cds size738
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12453.2083.1prot_H-canaliculatus_F_contig12453.2083.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12453 606..3134 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928961.1166544-CDS-H-canaliculatus_F_contig12453:605..9351622928961.1166544-CDS-H-canaliculatus_F_contig12453:605..935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 606..935 +
1696845630.891807-CDS-H-canaliculatus_F_contig12453:605..9351696845630.891807-CDS-H-canaliculatus_F_contig12453:605..935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 606..935 +
1622928961.136539-CDS-H-canaliculatus_F_contig12453:1556..16961622928961.136539-CDS-H-canaliculatus_F_contig12453:1556..1696Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 1557..1696 +
1696845630.9024057-CDS-H-canaliculatus_F_contig12453:1556..16961696845630.9024057-CDS-H-canaliculatus_F_contig12453:1556..1696Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 1557..1696 +
1622928961.1578767-CDS-H-canaliculatus_F_contig12453:2510..26211622928961.1578767-CDS-H-canaliculatus_F_contig12453:2510..2621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 2511..2621 +
1696845630.9106636-CDS-H-canaliculatus_F_contig12453:2510..26211696845630.9106636-CDS-H-canaliculatus_F_contig12453:2510..2621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 2511..2621 +
1622928961.1789346-CDS-H-canaliculatus_F_contig12453:2977..31341622928961.1789346-CDS-H-canaliculatus_F_contig12453:2977..3134Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 2978..3134 +
1696845630.9215205-CDS-H-canaliculatus_F_contig12453:2977..31341696845630.9215205-CDS-H-canaliculatus_F_contig12453:2977..3134Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12453 2978..3134 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12453.2083.1

>prot_H-canaliculatus_F_contig12453.2083.1 ID=prot_H-canaliculatus_F_contig12453.2083.1|Name=mRNA_H-canaliculatus_F_contig12453.2083.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=246bp
REELIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGATDHAQV
LTNSGAVPPLVVLLDSPNEEVLEQALWLLGNLAGEGATARDAVLEVDALP
PLVRCLERHQGSRSLLKIGSWTLSNLCDGQPRPVLDVHTVIPALAKLLQH
TDSEILSHTCWALSHLCDGLSTHIRAVVDADICWRLVELLKHRSWRVTKP
ALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNRDIQKEV*
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mRNA from alignment at H-canaliculatus_F_contig12453:606..3134+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12453.2083.1 ID=mRNA_H-canaliculatus_F_contig12453.2083.1|Name=mRNA_H-canaliculatus_F_contig12453.2083.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2529bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12453:606..3134+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGAGGAGCTCATCCGGGAGGCCCTGGAGAGGGACTGGGTGCCGCTCCT
CATGGGGTGGCTCGGCGCCGACACCCGGCCAGCGGTGCAGGTGGAGGCGC
TCTGGGCCCTGACGAACATCGCGGCCGGGGCGACCGACCACGCGCAGGTC
CTCACCAACAGCGGTGCCGTGCCGCCCCTCGTAGTCCTCCTCGACAGCCC
CAACGAGGAGGTGCTGGAGCAGGCGCTCTGGCTGCTCGGGAACCTCGCGG
GGGAGGGGGCGACGGCGAGGGACGCCGTCCTCGAGGTGGACGCCCTGCCG
CCGCTCGTGAGGTGCCTGGAGAGGCACCAGGTGCGTTCCCGCGTTCTTGT
GTGCGCGTGGATGCGTTTTTGTGTGCGCGCGCGGGTCTGGGTGTGCGGGT
CTGGGTGTGCGGGTCTGGGTGTGCGGGTCTGGGTGTGCGGGCCTGGGTGT
GCGGGTCGGGGTGTGCGAGCGCGTGCTCCTGCCTGTGGGCACGCATGCGA
CTGTGCGTACGCAAGTGCGGGTGCGTGTGCGGGTGCGGGTGAGCGCGGTC
GTGAGATGCCTCGCCTCGCCTCGCCTCGCTGCGGTGTCGTCGTGTCGTCG
TGTCGTCGTGTCGTCGTGTCGTTGGAGTGCTGCCGCCGCCCCTACCTTCG
CTCTCGGTTTGTTGTGATGCTCGCTCTCGTGTGGCCCTCGCGGTCGACCT
CGTCGTCGGTCGTTGTCGAGGGCGGCGTGTCTGCCTTCCTCCCGCCCTCG
TTGCCTCGGGCGCTACGAATAGCGTCCACGCTGTGCCTGCCGGCGCTGGT
GCTTCTGGCCAGCAAGGCTGCAACGGGCTTACAGGCCTTCGAAATACCCG
TACAGTAGGTGAGCATATCTCGACGCACCTCCTTCGCAACCGGAATCCCG
TTGTCTCAAGCTCGGCTGTTTCCGCCTCTGCCAACCCCTGCTACGCCCCA
GGGCTCGCGGTCGCTGCTGAAGATCGGGTCGTGGACGCTCAGCAACCTGT
GCGACGGGCAGCCCCGGCCGGTGCTGGACGTGCACACGGTTATTCCCGCG
CTCGCGAAGCTGCTGCAGCACACGGACAGCGAGATCCTCAGGTACGTGTC
TGGGGATGTTGTTTTTCAGGCCGCGTGCTTGAGTGCTCGAGTATTGCCGA
TGCTTGAGTGCTTGTCGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGATCGCTGATCGCCGATCGCCGGTCGC
TGATTGCTGAAAGATGCTCTCTCCCGTTGGTTCTTGTGAGGGGCGAACGA
TGCCGCTGTACATAATGTTCGCGCTTTTCGACGCCACCGCTGCTTGCTTG
CTTCCTTTTCGCTCTCTTCAACTCCTCGGTGGATGGGTGGCTGTGTTTCC
GGTGACTCTTGTCGATGGGCGCTTGTAGGAGAAACCAAGAGCTAGTAATC
AAACACTTGCAAGTACAAGAACAGCAACACGGAGGGAAGGAAGGAAAGAA
AGAAGAAAATAAGAAAAACCATTCGAGACAGGTCTCGAGAGAACATATCA
TACGTACGCTGAATTAGTTGCAACGAGGTCTCGCTGTTGCGGATGATGCG
GCTTTCTGACCCTGCCGCCTTCGCCGTTTACCGTTCTTCGATTTCCATGC
TTCGTGCGTAGAATCCGTCCCTCCCGCTAAGCCACCCCGGCCGGACGTTT
GTCCTCAAGCGCACCTCTCTGACGAACCCAGTCCGCCGCGCGTCTTGACG
TAGCTCCTGTGTCCTCTGGCTATCGCGGTATGTAATGATTTGAGTTTCGT
TGCTCTTTTCTCTTTTCTCTTGTCTCTCATCTCTTGTCTCTTATCTTTTG
TCTCCTGTCTCTTGTGTCTTGTCGCTTGTCTTCTTCTCGCCTCTCCGCCG
AGCAGTCACACTTGCTGGGCGTTGAGCCACTTGTGCGACGGCCTCTCGAC
GCACATCCGAGCGGTGGTGGACGCCGACATCTGTTGGCGGCTGGTGGAGC
TCCTGAAGCACCGCAGGTACGGCGGTCGGCTGTCGCCGGCAATCATCTCG
CTGTCACGGTCGCGGCGGTGATGGTGGTGGTGGTGGTCGTCGTCGTCATC
GATGCGACCCCGGGAACCAACAGTTTCTTTTCCTTTCTTTTCACTCCCTG
CGGCTAGTGAAGGGCACCAGCACCGCGCCTCTCTCGCCCGACAGCAAAAC
CATGCTTGGAAGAAAAGAAAGAGAAAAAAGAAGACCCATAAATCACCAAC
AAACCAACATCGGCGGTTTCGTTTGATGCGCACCGTGCTCTTTTTGGGAC
GTCCTGCCGGTGGTGGTGGTGCTGCTGCGGGTGCTGCTGCTGCTGCTGCC
GCGTCTCTGTGCTCATTTGCAGCTGGCGCGTCACGAAGCCAGCGCTGCGG
ACGATCGGAAACATCGTGTGTGCTGAAGACGACACGGATTACACCCAGCA
CATCATAGACGCCGGCGCCGTCCCTTGCTTGCAGCAGCTCATCGCGCACA
GCAACCGGGACATTCAAAAGGAGGTATGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12453:606..3134+

>mRNA_H-canaliculatus_F_contig12453.2083.1 ID=mRNA_H-canaliculatus_F_contig12453.2083.1|Name=mRNA_H-canaliculatus_F_contig12453.2083.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1476bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12453:606..3134+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGAGGAGCTCATCCGGGAGGCCCTGGAGAGGGACTGGGTGCCGCTCCT
CATGGGGTGGCTCGGCGCCGACACCCGGCCAGCGGTGCAGGTGGAGGCGC
TCTGGGCCCTGACGAACATCGCGGCCGGGGCGACCGACCACGCGCAGGTC
CTCACCAACAGCGGTGCCGTGCCGCCCCTCGTAGTCCTCCTCGACAGCCC
CAACGAGGAGGTGCTGGAGCAGGCGCTCTGGCTGCTCGGGAACCTCGCGG
GGGAGGGGGCGACGGCGAGGGACGCCGTCCTCGAGGTGGACGCCCTGCCG
CCGCTCGTGAGGTGCCTGGAGAGGCACCAGAGGGAGGAGCTCATCCGGGA
GGCCCTGGAGAGGGACTGGGTGCCGCTCCTCATGGGGTGGCTCGGCGCCG
ACACCCGGCCAGCGGTGCAGGTGGAGGCGCTCTGGGCCCTGACGAACATC
GCGGCCGGGGCGACCGACCACGCGCAGGTCCTCACCAACAGCGGTGCCGT
GCCGCCCCTCGTAGTCCTCCTCGACAGCCCCAACGAGGAGGTGCTGGAGC
AGGCGCTCTGGCTGCTCGGGAACCTCGCGGGGGAGGGGGCGACGGCGAGG
GACGCCGTCCTCGAGGTGGACGCCCTGCCGCCGCTCGTGAGGTGCCTGGA
GAGGCACCAGGGCTCGCGGTCGCTGCTGAAGATCGGGTCGTGGACGCTCA
GCAACCTGTGCGACGGGCAGCCCCGGCCGGTGCTGGACGTGCACACGGTT
ATTCCCGCGCTCGCGAAGCTGCTGCAGCACACGGACAGCGAGATCCTCAG
GGCTCGCGGTCGCTGCTGAAGATCGGGTCGTGGACGCTCAGCAACCTGTG
CGACGGGCAGCCCCGGCCGGTGCTGGACGTGCACACGGTTATTCCCGCGC
TCGCGAAGCTGCTGCAGCACACGGACAGCGAGATCCTCAGTCACACTTGC
TGGGCGTTGAGCCACTTGTGCGACGGCCTCTCGACGCACATCCGAGCGGT
GGTGGACGCCGACATCTGTTGGCGGCTGGTGGAGCTCCTGAAGCACCGCA
GTCACACTTGCTGGGCGTTGAGCCACTTGTGCGACGGCCTCTCGACGCAC
ATCCGAGCGGTGGTGGACGCCGACATCTGTTGGCGGCTGGTGGAGCTCCT
GAAGCACCGCAGCTGGCGCGTCACGAAGCCAGCGCTGCGGACGATCGGAA
ACATCGTGTGTGCTGAAGACGACACGGATTACACCCAGCACATCATAGAC
GCCGGCGCCGTCCCTTGCTTGCAGCAGCTCATCGCGCACAGCAACCGGGA
CATTCAAAAGGAGGTATGACTGGCGCGTCACGAAGCCAGCGCTGCGGACG
ATCGGAAACATCGTGTGTGCTGAAGACGACACGGATTACACCCAGCACAT
CATAGACGCCGGCGCCGTCCCTTGCTTGCAGCAGCTCATCGCGCACAGCA
ACCGGGACATTCAAAAGGAGGTATGA
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