prot_H-canaliculatus_F_contig12445.2076.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12445.2076.1
Unique Nameprot_H-canaliculatus_F_contig12445.2076.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length56
Homology
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.200e-27
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    2 ERRRAVKAGQWGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLLP 56
            ER RAVKAGQWGD IFKHETVVRPDIL+S+M QGY+VLWTDVDIVWLGNPLPLLP
Sbjct: 1279 ERHRAVKAGQWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLP 1333          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: D8LU02_ECTSI (Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU02_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 2.300e-18
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    2 ERRRAVKAGQWGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLLP 56
            ER  A++AGQWGD IFK +TV RPDIL+ ++RQGY+ L+TDVDI WLGN L LLP
Sbjct:  339 ERAHAIQAGQWGDNIFKQQTVARPDILLPILRQGYKALYTDVDIFWLGNVLSLLP 393          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A3L6EDG1_MAIZE (Beta-arabinofuranosyltransferase RAY1 n=5 Tax=Zea mays TaxID=4577 RepID=A0A3L6EDG1_MAIZE)

HSP 1 Score: 51.6 bits (122), Expect = 3.800e-6
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G   F+  T V+  I++ ++R GY VL +DVDI W GNP+PLL
Sbjct:  490 FGTKCFQQVTKVKSRIVLEILRLGYNVLLSDVDIYWFGNPMPLL 533          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A4U5MZZ0_POPAL (Nucleotid_trans domain-containing protein (Fragment) n=2 Tax=Populus alba TaxID=43335 RepID=A0A4U5MZZ0_POPAL)

HSP 1 Score: 50.4 bits (119), Expect = 7.160e-6
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G A F+  T V+  ++  +++ GY VL +DVD+ W GNPLPLL
Sbjct:   46 FGTACFQRVTKVKSRMVWKILKLGYNVLLSDVDVYWFGNPLPLL 89          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A4U5MB13_POPAL (Nucleotid_trans domain-containing protein n=3 Tax=Populus alba TaxID=43335 RepID=A0A4U5MB13_POPAL)

HSP 1 Score: 50.4 bits (119), Expect = 9.620e-6
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G A F+  T V+  ++  +++ GY VL +DVD+ W GNPLPLL
Sbjct:  261 FGTACFQRVTKVKSRMVWKILKLGYNVLLSDVDVYWFGNPLPLL 304          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A6M2F676_9ROSI (Nucleotid_trans domain-containing protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2F676_9ROSI)

HSP 1 Score: 50.4 bits (119), Expect = 9.650e-6
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G A F+  T V+  ++  +++ GY VL +DVD+ W GNPLPLL
Sbjct:  261 FGTACFQRVTKVKSRMVWKILKLGYNVLLSDVDVYWFGNPLPLL 304          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A2P6R146_ROSCH (Putative fucosylgalactoside 3-alpha-galactosyltransferase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R146_ROSCH)

HSP 1 Score: 50.1 bits (118), Expect = 1.330e-5
Identity = 19/44 (43.18%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G   F+  T V+  +++ +++ GY VL +DVD+ W GNPLPLL
Sbjct:  475 FGTKCFQKVTKVKSRMVLKILKMGYNVLLSDVDVYWFGNPLPLL 518          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: UPI000D094561 (transcription elongation regulator 1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D094561)

HSP 1 Score: 50.1 bits (118), Expect = 1.340e-5
Identity = 19/44 (43.18%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G   F+  T V+  +++ +++ GY VL +DVD+ W GNPLPLL
Sbjct: 1402 FGTKCFQKVTKVKSRMVLKILKMGYNVLLSDVDVYWFGNPLPLL 1445          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A1R3IC05_9ROSI (Reticulon n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3IC05_9ROSI)

HSP 1 Score: 49.7 bits (117), Expect = 1.800e-5
Identity = 19/44 (43.18%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G   F+  T V+  +++ +++ GY VL +DVD+ W GNPLPLL
Sbjct:  105 FGTKCFQRVTKVKSRMVLKILKLGYNVLLSDVDVYWFGNPLPLL 148          
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Match: A0A1R3I700_COCAP (Reticulon n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I700_COCAP)

HSP 1 Score: 49.7 bits (117), Expect = 1.830e-5
Identity = 19/44 (43.18%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   12 WGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGNPLPLL 55
            +G   F+  T V+  +++ +++ GY VL +DVD+ W GNPLPLL
Sbjct:  494 FGTKCFQRVTKVKSRMVLKILKLGYNVLLSDVDVYWFGNPLPLL 537          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12445.2076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0G0_9PHAE5.200e-2789.09Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D8LU02_ECTSI2.300e-1867.27Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus... [more]
A0A3L6EDG1_MAIZE3.800e-647.73Beta-arabinofuranosyltransferase RAY1 n=5 Tax=Zea ... [more]
A0A4U5MZZ0_POPAL7.160e-645.45Nucleotid_trans domain-containing protein (Fragmen... [more]
A0A4U5MB13_POPAL9.620e-645.45Nucleotid_trans domain-containing protein n=3 Tax=... [more]
A0A6M2F676_9ROSI9.650e-645.45Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A2P6R146_ROSCH1.330e-543.18Putative fucosylgalactoside 3-alpha-galactosyltran... [more]
UPI000D0945611.340e-543.18transcription elongation regulator 1 n=1 Tax=Rosa ... [more]
A0A1R3IC05_9ROSI1.800e-543.18Reticulon n=1 Tax=Corchorus olitorius TaxID=93759 ... [more]
A0A1R3I700_COCAP1.830e-543.18Reticulon n=1 Tax=Corchorus capsularis TaxID=21014... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 5..55
e-value: 9.8E-9
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12445contigH-canaliculatus_F_contig12445:168..335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12445.2076.1mRNA_H-canaliculatus_F_contig12445.2076.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12445 168..335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12445.2076.1 ID=prot_H-canaliculatus_F_contig12445.2076.1|Name=mRNA_H-canaliculatus_F_contig12445.2076.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=56bp
QERRRAVKAGQWGDAIFKHETVVRPDILMSVMRQGYRVLWTDVDIVWLGN
PLPLLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase