mRNA_H-canaliculatus_F_contig1244.2075.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1244.2075.1
Unique NamemRNA_H-canaliculatus_F_contig1244.2075.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A6H5L608_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L608_9PHAE)

HSP 1 Score: 624 bits (1608), Expect = 4.360e-210
Identity = 378/586 (64.51%), Postives = 418/586 (71.33%), Query Frame = 3 
Query:    6 ILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVLIGFVISVKLMLDVMDPAGGQKKPEFEVTQEDVEALLKNLDDTSSAADVLECLAACPQLCSEERRALAEDMEPITTPLRRWLLKLDGGAPPLRGPASSSPXXXXGPPKTTARKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQKEPEVEGEFFSQGRRGQGNRRSTRESPELSKVVTHNLVVLLSALHRAPPDVLAAAVDGGAASGVAPAPETAVREKKGKESSAGAXXXXXXEGGXXEEEXXXXXXXXXXXXXAAGEKLAGDHPGAFVAFGGASETAAPAXXXXXXXXXXXXVSRLLSAVAAGGQLAREQNLILGLAEPLLDACLQVAAKRASPELFGTVVETKAMLRRRLWVPSKESQEGFETATALERQEREVDADFDAAVPRVKVKSVVVETWGESQVALGDTVTATITIAREHATEYQGLRRRRPEAGSFIAKGEPWWVILAGGRGGNSLIRVTPTLVENLGSGIAECKVR 1763
            ILDLPSRAN+TVIKSHYRRLSLK+HPDKNPGNR EANKKFN++AKAYKALSDPEARRNWE+YGHPDG QPWTFDLA+P WLRPGKDT NGTL LYGL YMAVL+GFV+  K+ LD++DPAGG K+P+FEVT EDV+ALL NLDDTSS ADVLECLAACPQLCS ERR LA +ME IT P+R WLL+ +GGAPPLRGP SSSP XXX          XXXXXXXXXXXXXXXXXXX               AA  + EV+GEFF+QGRRG+GNRR+ RESPELS+VV HNLVV+LSALHRAP                                                                                          XXXXXXXXXXX  SRLL+AV+AGG+LAREQ+L+ GLAEPLLDAC+QVAA+RASP+L GTVVETKAMLRRRLW          E   ALERQ  EVD D DAAVP +KVKSV VETWGESQVA+GDTVTATITIAREHA EYQGLRRRRPEAGS IAKGEPWWV+LAGG+GG+SLIRVTP LVENLGSGIAECK++
Sbjct:   84 ILDLPSRANATVIKSHYRRLSLKHHPDKNPGNRREANKKFNQVAKAYKALSDPEARRNWEQYGHPDGYQPWTFDLALPAWLRPGKDTDNGTLVLYGLAYMAVLLGFVLGAKVTLDLLDPAGGGKQPDFEVTDEDVKALLSNLDDTSSTADVLECLAACPQLCSAERRVLAGEMEAITDPVRDWLLEREGGAPPLRGPLSSSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESPASGEEQSPAAAAAGTKGEVDGEFFTQGRRGEGNRRTARESPELSRVVAHNLVVMLSALHRAPXXXX--------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSRLLAAVSAGGRLAREQDLVFGLAEPLLDACMQVAARRASPQLLGTVVETKAMLRRRLW--------SSEDPAALERQREEVDLDLDAAVPSIKVKSVAVETWGESQVAVGDTVTATITIAREHAPEYQGLRRRRPEAGSLIAKGEPWWVMLAGGKGGSSLIRVTPMLVENLGSGIAECKMK 599
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BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A7S1B9Q5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9Q5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.000e-18
Identity = 67/171 (39.18%), Postives = 95/171 (55.56%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWL-RPGKDTGNGTLALYGLGYMAVLIGFVISVKLMLDVMDPAGGQKKPEFEVTQEDVEALLKNLDDTSSAADVLECLAACPQLCSEERRAL 512
            +IL + + AN+T+IK  YR+LSL +HPDK  G   E    F ++A AYKALSDP AR NW+K+GHPDG    +FD A+P WL  P   T    L LY   ++A++I  + +V       D    QK  +  V + D   L   L+D S+  DVL  +A  P+     +++L
Sbjct:  110 EILGVATGANTTLIKRAYRQLSLVHHPDK--GGSEET---FQQVALAYKALSDPIARENWQKHGHPDGPVRASFDFALPSWLLHPQGITAIVLLVLYLGMFVAIIIYAIRTVAKN----DEDAVQKHQDMSVARPDQNYLQIMLEDKSTHEDVLYFIATTPENLHMAKKSL 271
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A151Z5B0_9MYCE (J domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5B0_9MYCE)

HSP 1 Score: 100 bits (248), Expect = 8.400e-18
Identity = 63/173 (36.42%), Postives = 90/173 (52.02%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVLIGFVISVKLMLDVMDPAGGQKKPEFEVTQEDVEALLKNLDDTSSAADVLECLAACPQLCSEERRALAED 521
            ++LDL   A    IK  YR+LSLKYHPDKNPG   EA  KF  I+KAY+AL+D   R  +EKYG+PDG QP +  +A+P WL    +  N +L L G   + +LIG  +   +          +K     ++Q+ +      +D+T     ++E LAA  +      R   ED
Sbjct:  121 KLLDLEDGATPDEIKKAYRKLSLKYHPDKNPG--KEAQDKFIAISKAYEALTDDAVREKYEKYGNPDGPQPISVGIALPSWLI---NKSNSSLVLAGYMLLLILIGIAVYYYVK-------STRKNATIPISQQTLAFYYHTVDNTFRLKSLIEMLAAAIEFKDLPERISDED 281
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BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A7S1B8Q5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8Q5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.860e-17
Identity = 67/171 (39.18%), Postives = 95/171 (55.56%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWL-RPGKDTGNGTLALYGLGYMAVLIGFVISVKLMLDVMDPAGGQKKPEFEVTQEDVEALLKNLDDTSSAADVLECLAACPQLCSEERRAL 512
            +IL + + AN+T+IK  YR+LSL +HPDK  G   E    F ++A AYKALSDP AR NW+K+GHPDG    +FD A+P WL  P   T    L LY   ++A++I  + +V       D    QK  +  V + D   L   L+D S+  DVL  +A  P+     +++L
Sbjct:  110 EILGVATGANTTLIKRAYRQLSLVHHPDK--GGSEET---FQQVALAYKALSDPIARENWQKHGHPDGPVRASFDFALPSWLLHPQGITAIVLLVLYLGMFVAIIIYAIRTVAKN----DEDAVQKHQDMSVARPDQNYLQIMLEDKSTHEDVLYFIATTPENLHMAKKSL 271
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A8J6H7E9_TENMO (J domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H7E9_TENMO)

HSP 1 Score: 95.9 bits (237), Expect = 5.330e-17
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVL 314
            +IL +P  A+   IK  YRRLSL  HPDK+ GN  E    F +++KAY+AL+D EAR+NWEKYG+PDG    +F +A+P W+   K+     L LYGL +M  L
Sbjct:   92 EILGIPLGASQGEIKKAYRRLSLILHPDKDTGNEKE----FMKLSKAYQALTDDEARKNWEKYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGLYGLVFMVAL 190
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A2K3PCP1_TRIPR (Translocation protein SEC63 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PCP1_TRIPR)

HSP 1 Score: 91.7 bits (226), Expect = 8.660e-17
Identity = 53/111 (47.75%), Postives = 72/111 (64.86%), Query Frame = 3 
Query:    6 ILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKF-NRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVLIGFVISV 335
            IL L   A  + IK +YRRLS++YHPDKNP    EA+K F   IAKAY+AL+DP AR N+EKYGHPDG Q +   +A+P +L        G L L+ +G + +L+  V++V
Sbjct:  103 ILGLEPGATESEIKKNYRRLSIQYHPDKNPD--PEAHKYFVEHIAKAYQALTDPIARENYEKYGHPDGRQGFQMGIALPQFLLNIDGASGGILLLWIVG-LCILLPLVVAV 210
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BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: V9IM93_APICE (Translocation protein SEC63 n=1 Tax=Apis cerana TaxID=7461 RepID=V9IM93_APICE)

HSP 1 Score: 90.5 bits (223), Expect = 9.890e-17
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVL 314
            +IL + S A  + IK  YR+LSL  HPDK  GN     K F R+ KAY+AL+D EAR+NWEKYG+PDG    +F +A+P W+   K+     L  Y L +M VL
Sbjct:  108 EILGVSSSATQSDIKKAYRKLSLILHPDKETGNE----KAFMRLTKAYQALTDEEARKNWEKYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGFYSLVFMFVL 206
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: D6WNC7_TRICA (Translocation protein SEC63 homolog-like Protein n=2 Tax=Tribolium TaxID=7069 RepID=D6WNC7_TRICA)

HSP 1 Score: 96.7 bits (239), Expect = 1.030e-16
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVL 314
            +IL +P  A+   IK  YRRLSL  HPDK+ GN  E    F +++KAY+AL+D EAR+NWEKYG+PDG    +F +A+P W+   K+     L LYGL +M  L
Sbjct:  107 EILGIPLGASQAEIKKAYRRLSLILHPDKDTGNEKE----FMKLSKAYQALTDDEARKNWEKYGNPDGPGAMSFGIALPSWIVE-KENSVWVLGLYGLVFMVAL 205
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: UPI00109BD256 (translocation protein SEC63 homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD256)

HSP 1 Score: 96.3 bits (238), Expect = 2.060e-16
Identity = 49/103 (47.57%), Postives = 69/103 (66.99%), Query Frame = 3 
Query:    6 ILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALYGLGYMAVL 314
            +L++   A+   I+  YRRLS+KYHPDK  G+     KKF RIAKAY+AL++ E+R+NWE+YG+PDG    +F +A+P WL   K+     LA YGL +M +L
Sbjct:  110 VLEIDRGASVAEIRRQYRRLSMKYHPDKETGDP----KKFMRIAKAYEALTNEESRKNWEEYGNPDGPGATSFGIALPSWLVS-KENSVWVLAAYGLAFMIIL 207
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Match: A0A2P6MQT7_9EUKA (Translocation protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MQT7_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 2.210e-16
Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = 3 
Query:    3 QILDLPSRANSTVIKSHYRRLSLKYHPDKNPGNRSEANKKFNRIAKAYKALSDPEARRNWEKYGHPDGDQPWTFDLAVPGWLRPGKDTGNGTLALY 290
            +IL+L   A    IKS YR+LSLK HPDKNP   ++A  ++  IAKAY  L+DP+ +  WEKYG+PDG Q +T  +A+PGWL  GK+  +  LA+Y
Sbjct:  105 KILELDQGATDAEIKSSYRKLSLKNHPDKNPS--ADAAARYTEIAKAYTTLTDPDTKEKWEKYGNPDGPQGFTMGVALPGWLVDGKNK-SVVLAIY 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1244.2075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L608_9PHAE4.360e-21064.51J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A7S1B9Q5_9STRA4.000e-1839.18Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A151Z5B0_9MYCE8.400e-1836.42J domain-containing protein n=1 Tax=Tieghemosteliu... [more]
A0A7S1B8Q5_9STRA1.860e-1739.18Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A8J6H7E9_TENMO5.330e-1748.08J domain-containing protein n=1 Tax=Tenebrio molit... [more]
A0A2K3PCP1_TRIPR8.660e-1747.75Translocation protein SEC63 n=1 Tax=Trifolium prat... [more]
V9IM93_APICE9.890e-1747.12Translocation protein SEC63 n=1 Tax=Apis cerana Ta... [more]
D6WNC7_TRICA1.030e-1648.08Translocation protein SEC63 homolog-like Protein n... [more]
UPI00109BD2562.060e-1647.57translocation protein SEC63 homolog n=1 Tax=Exaipt... [more]
A0A2P6MQT7_9EUKA2.210e-1650.00Translocation protein (Fragment) n=1 Tax=Planoprot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1244contigH-canaliculatus_F_contig1244:22973..28513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.9
Seed ortholog evalue1.7e-123
Seed eggNOG ortholog2880.D8LSY2
KEGG koko:K09537,ko:K09540
KEGG TC3.A.5.8,3.A.5.9
KEGG Pathwayko03060,ko04141,map03060,map04141
GOsGO:0001655,GO:0001889,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0010259,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061008,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072001,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0098827
EggNOG free text desc.posttranslational protein targeting to membrane, translocation
EggNOG OGsCOG5407@1,KOG0721@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02044,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-26_001850.1
Exons6
Model size2963
Cds size1674
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1244.2075.1prot_H-canaliculatus_F_contig1244.2075.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1244 23960..27499 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.9927597-UTR-H-canaliculatus_F_contig1244:22972..239591622928959.9927597-UTR-H-canaliculatus_F_contig1244:22972..23959Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 22973..23959 -
1696845630.474792-UTR-H-canaliculatus_F_contig1244:22972..239591696845630.474792-UTR-H-canaliculatus_F_contig1244:22972..23959Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 22973..23959 -
1622928960.1204011-UTR-H-canaliculatus_F_contig1244:27499..276521622928960.1204011-UTR-H-canaliculatus_F_contig1244:27499..27652Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 27500..27652 -
1696845630.5362403-UTR-H-canaliculatus_F_contig1244:27499..276521696845630.5362403-UTR-H-canaliculatus_F_contig1244:27499..27652Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 27500..27652 -
1622928960.1373935-UTR-H-canaliculatus_F_contig1244:28364..285131622928960.1373935-UTR-H-canaliculatus_F_contig1244:28364..28513Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 28365..28513 -
1696845630.5482829-UTR-H-canaliculatus_F_contig1244:28364..285131696845630.5482829-UTR-H-canaliculatus_F_contig1244:28364..28513Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1244 28365..28513 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928960.0102363-CDS-H-canaliculatus_F_contig1244:23959..243171622928960.0102363-CDS-H-canaliculatus_F_contig1244:23959..24317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 23960..24317 -
1696845630.4893453-CDS-H-canaliculatus_F_contig1244:23959..243171696845630.4893453-CDS-H-canaliculatus_F_contig1244:23959..24317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 23960..24317 -
1622928960.041405-CDS-H-canaliculatus_F_contig1244:24672..247911622928960.041405-CDS-H-canaliculatus_F_contig1244:24672..24791Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 24673..24791 -
1696845630.498875-CDS-H-canaliculatus_F_contig1244:24672..247911696845630.498875-CDS-H-canaliculatus_F_contig1244:24672..24791Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 24673..24791 -
1622928960.0587027-CDS-H-canaliculatus_F_contig1244:25505..265911622928960.0587027-CDS-H-canaliculatus_F_contig1244:25505..26591Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 25506..26591 -
1696845630.5081778-CDS-H-canaliculatus_F_contig1244:25505..265911696845630.5081778-CDS-H-canaliculatus_F_contig1244:25505..26591Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 25506..26591 -
1622928960.080582-CDS-H-canaliculatus_F_contig1244:27079..271871622928960.080582-CDS-H-canaliculatus_F_contig1244:27079..27187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 27080..27187 -
1696845630.5171134-CDS-H-canaliculatus_F_contig1244:27079..271871696845630.5171134-CDS-H-canaliculatus_F_contig1244:27079..27187Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 27080..27187 -
1622928960.1018066-CDS-H-canaliculatus_F_contig1244:27496..274991622928960.1018066-CDS-H-canaliculatus_F_contig1244:27496..27499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 27497..27499 -
1696845630.5259247-CDS-H-canaliculatus_F_contig1244:27496..274991696845630.5259247-CDS-H-canaliculatus_F_contig1244:27496..27499Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1244 27497..27499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1244.2075.1

>prot_H-canaliculatus_F_contig1244.2075.1 ID=prot_H-canaliculatus_F_contig1244.2075.1|Name=mRNA_H-canaliculatus_F_contig1244.2075.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=558bp
MAVLIGFVISVKLMLDVMDPAGGQKKPEFEVTQEDVEALLKNLDDTSSAA
DVLECLAACPQLCSEERRALAEDMEPITTPLRRWLLKLDGGAPPLRGPAS
SSPPPSAGPPKTTARKGKGKGSKNKGGGGGGGGGGGVASGGGSTSAAAPA
TAAQKEPEVEGEFFSQGRRGQGNRRSTRESPELSKVVTHNLVVLLSALHR
APPDVLAAAVDGGAASGVAPAPETAVREKKGKESSAGAEGEGQGEGGGGE
EEGGDSSSGVAAAAVAAGEKLAGDHPGAFVAFGGASETAAPAAGGGGGDE
GDDAVSRLLSAVAAGGQLAREQNLILGLAEPLLDACLQVAAKRASPELFG
TVVETKAMLRRRLWVPSKESQEGFETATALERQEREVDADFDAAVPRVKV
KSVVVETWGESQVALGDTVTATITIAREHATEYQGLRRRRPEAGSFIAKG
EPWWVILAGGRGGNSLIRVTPTLVENLGSGIAECKVRSFFACLAGEFIVQ
WLVCAHVMHGMPLWVQVCRSPRLDEVSSRVGKMAKHGSSYTVNGRLGVSR
SLKTRWE*
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mRNA from alignment at H-canaliculatus_F_contig1244:22973..28513-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1244.2075.1 ID=mRNA_H-canaliculatus_F_contig1244.2075.1|Name=mRNA_H-canaliculatus_F_contig1244.2075.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5541bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1244:22973..28513- (Hapterophycus canaliculatus Oshoro5f female)
ATCAGATACTGGATCTGCCATCGAGGGCAAACTCTACCGTGATCAAGTCC
CACTACCGGCGGCTGTCCCTCAAGTACCACCCAGACAAGAACCCGGGCAA
CCGGAGTGAGGCCAACAAGAAGTTCAACCGAATCGCCAAGGCGTACAAGG
TGACGAAGCCGAAACGACTGCTGCGTGCAAGAGCTCGTGCACGTGGCTGC
GGAGGGGCGAAGGGGTGTCACGAGTGAAGGCCCCCCCCGGCCTCACCTTG
GGCGTAGTCGAGCCTCACGGGCTGGGCGGCGGAAAGCGACCGCCCCAGCG
ATGAACTGGATTGTCCTCCGTGAAGATTTCACGGCGGGTGTACCGCAAGA
GTCGGTGTCTTGGTCGAGAGTGTAGTAGTCTCTGTCGACCCAACACTTCG
ACAACGGAAAGGGTGCCAACGTCGGTGCTGGTACAACCTGTGATAGGGAA
GATGTTGATTTTCTCGTCCAACATGGGCATCCCCACCCGCTTTCGAGGTG
TCTGGCCGGGATTAGCTACCCCACCCCCCGACGCACAGACCCGGTTCGTC
GTGGTACTGCAGTTCTCGGAAGACCTGTGGCCTCGTGGCGTTTGTACCGT
AGTCTCGCTTCCATTGCCGTCCGCACGCAGCTTAAAGTGCACGCCTCTGC
GGCGCCGCAGCAGTCGTCCCGCGGCGAGCGCTCGAGCCCCACCGGTGTTG
CCCGCACGGCGGCAGTGAAGCATTCACCCAGACGGACGGCCGGTGTGCTG
CTCGTCTCCCCGAGTCCACCGGCTTTCTCGCCACGCCGGCAGCCTGCCAG
CGTACTCATGGTCGAAAGAATAATCGCTGCCTCCCTTCTTTTTTTCGCCG
CTGTCGGACAGGCCCTCAGCGACCCTGAGGCGAGGCGCAACTGGGAGAAA
TACGGGCACCCCGACGGTGATCAGCCGTGGACGTTCGACCTCGCCGTGCC
AGGCTGGCTGCGGCCTGGCAAGGACACGGGCAACGGCACCCTAGCACTCT
ACGGTCTGGGCTACATGGTACGTGCAGGCCATGCCACGGTGTTATTCTTG
CCCTTGTCGTCGGTGCCGCCAAGCGGCTTCTCGTCCCCCGCACACGGGCC
AACTATCTTTCGACGCCCAATGACGAGTTGCTGATCATCTAAAGAGAACG
AAGTGCTGCTGTCGGTTTGGTGCTTGTGGTTCTGACGGTGGTTCTGATTG
TGGTTCGGATGGTGGCTCTGGTGGTTCTAGTGGTCTCGCCGCCGCAGAGG
CTTCTTTGTAAGTCCCCGCCCGAACAGTGGTGACCCTAGCTCCGTTGTCC
CGGCGGATCCGGTATTCCCCCAACAGGCGGTGCTAATTGGCTTCGTGATA
AGCGTCAAGCTCATGCTGGACGTGATGGACCCCGCAGGGGGGCAAAAAAA
GCCGGAGTTCGAGGTCACCCAGGAGGACGTGGAGGTAGGTCGTGGATTGG
GCCCCGCCTTCGTTTTCAGGTGCTGCACACTGCATACGCCGCACGCTGCG
ACCCTGCAACCTGCAACCCGCAGGATGGTCCCTTCACGCGTAACCTCGGG
GCCTCTGAGCGGATGTCTAAACCCGTTCGGTGGGCTTGGCGGTCGCTACT
GTAGAGGCTCGCCGTTTTTGACGGGTTATGGCGTAATGAATTTCAAGGCC
GATGACGTCGCTCGACAAAACTCCGCGCCCCTGACGTGCACGTGTTTGCT
TGGTGCTAGCAAGGACACGCTAACATACCTGCGTGCGCCCCGGGACACGC
ACCTGCTGCGCACTTATCCGTCGCCTCGTCGTGTAGCTGCTCCGCGAGAG
GATCTTCGCCCCGCCTGTCGTCACCCCAGGCGAGAAAAGTATGCAAGCAC
GCACACTCCGGTTGCACTCGTGCTGAACTCATGTTACCCGCGTGCCGCTG
GTCCTTCTCTTCTCTCCGTCAGGCCTTGCTCAAGAACTTGGACGACACCA
GCTCGGCGGCCGACGTCCTCGAGTGCCTCGCCGCCTGCCCTCAGCTGTGC
TCGGAAGAGCGCCGGGCCCTAGCAGAAGATATGGAACCGATCACCACCCC
CCTCCGCCGGTGGCTCCTGAAGCTGGACGGCGGGGCCCCGCCGTTGCGGG
GTCCCGCATCCTCCTCGCCACCGCCTTCCGCGGGGCCGCCTAAAACCACC
GCACGGAAAGGGAAGGGAAAGGGTTCCAAGAACAAGGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGGGGTGTCGCGTCTGGGGGAGGGAGCACGTCTGCGG
CAGCTCCCGCCACGGCGGCGCAGAAGGAGCCGGAGGTCGAGGGAGAGTTT
TTCAGCCAGGGGAGGAGGGGGCAAGGGAACCGGCGGAGCACCCGGGAGAG
CCCCGAGCTCTCCAAGGTGGTTACGCACAATCTGGTGGTGCTGTTGAGCG
CTCTCCACCGAGCGCCGCCGGACGTCCTAGCCGCCGCTGTTGACGGCGGC
GCGGCGTCCGGCGTTGCCCCAGCACCGGAGACGGCCGTGAGAGAGAAAAA
AGGGAAGGAGTCGTCAGCAGGCGCGGAAGGGGAAGGGCAAGGGGAAGGCG
GAGGTGGGGAAGAAGAAGGCGGGGATTCGTCCTCCGGCGTCGCCGCCGCT
GCCGTTGCTGCGGGCGAGAAGCTGGCAGGGGACCATCCCGGCGCCTTCGT
GGCGTTCGGCGGAGCAAGCGAGACGGCGGCCCCGGCAGCGGGAGGAGGCG
GCGGCGACGAGGGCGATGACGCCGTTTCCCGGCTGCTCTCGGCGGTGGCT
GCGGGCGGACAGCTGGCACGGGAACAGAACTTGATCCTGGGGCTCGCGGA
GCCGCTGCTGGACGCCTGCCTGCAGGTGGCGGCGAAGCGAGCTTCCCCGG
AGCTGTTCGGCACGGTGGTGGAGACCAAGGCCATGCTGAGGCGTCGGCTG
TGGGTGCCGTCGAAGGAGTCCCAGGAGGGGTTCGAGACGGCCACCGCCCT
TGAGAGGCAGGAGAGGGAGGTCGATGCGGACTTCGACGCCGCCGTGCCTC
GCGTCAAGGTGAGCGTTTCGTTTTTTGCTTCGTTGAAGTGGGATCACGCG
ATCAAGCGGTCGAGCGGTGCAGTTGCCTGTTTTTCACTGCGGCAGCTCGC
GCTGTATGGTGGGTCTTCGGGCGAGCGATGACCGTACGCTCTCTTTCTGT
TTTGCTTGGGGCTCGCCCAGTGTCGACCAATATGTCGTTGTTGTCGTTGT
CCTTTGAAATGAAACAGATTCAACGGACTAGAAGGATGTCTACCGAGGCA
GAAGCCGAGGGAATTTTGTTGAGCGCCTTGCGATTAGGGTCAGATGCGCC
GATGGGGACAATAACATCGACACGAGGAAGGGAGAACGTTATGAAGAGCT
CTTCGATATTATTTGTTCAGAGAAATCAACGAAAGAAGAATTCGGGGGCG
GGGGCTGGGGATGCCTCTGTTCCAAACCCAAACCCGATCTCGCGTCGACC
GTGCTCAAGAATAAAAATGTACTTCAGTATTCAACTCTCATTTATCGCCT
GGGGCCTTGCTTTGGCGACGTAGATATGAAATAACCAGACACCCAAATAA
CAAAGTAATAGTCAGTGTTTCGCCCGCACACATCCAAAGCGGCAGCTCCA
CCATCGAGACCGCGGTCACAATCGTTCACGACCCGTGGTTTCTACAAGTA
ACCGTTGGCATGCGGCGTTCTCGTGCGTTATCGAAACCGCTGCCGCCGTT
GGCTCGCTCTGTCTGCGCGCAGGTGAAGAGCGTCGTGGTCGAGACCTGGG
GAGAGAGCCAGGTCGCATTGGGAGACACGGTCACCGCCACCATCACCATC
GCCAGAGAGCACGCTACGGAATACCAGGGGCTCCGCAGAAGGTACTCCTC
GGATCCGAGTACCCCATCCAAGCTTGTTCGTGTCGATAAGGCAAGATTCT
AAGCTGAGGGCCAGCGAGCACGGGGCACAAGCTCGGACCGTTCCCGTGCA
TTACCCTACTCAACCATCCATTTTGACACTTTGCACAGTTTGCACAGGTA
CCCCTCCCCCCCCCTGCCCCGACAGGCATTTGCACGCTCGTCGTGTGTGG
AGCTCACCGCCTTGACTCGATTGGCGGCAACTTCGATCCCACGGAACCCC
CCGTCCCCTCCCCCCACCTCCGGCGTTCCACCGGCGGCTCGGCTGTTCCT
CGAATCTGCTCTGGTCTACTCGGCGATGTGACGTACAAACCAACAGGAGG
CCGGAGGCGGGGTCGTTCATCGCGAAGGGAGAGCCTTGGTGGGTCATCCT
AGCCGGCGGGCGCGGGGGTAACTCGTTGATCAGGGTCACGCCTACGCTGG
TGGAGAACCTGGGCAGCGGTATCGCCGAGTGCAAGGTGCGATCGTTTTTT
GCCTGTTTGGCTGGAGAGTTCATTGTTCAGTGGTTGGTGTGTGCTCATGT
GATGCATGGGATGCCTTTGTGGGTGCAGGTGTGTAGGTCGCCTCGATTGG
ACGAAGTTTCTTCGCGTGTCGGAAAGATGGCAAAACATGGCAGCAGTTAC
ACAGTCAATGGAAGGCTCGGCGTAAGCCGTTCCCTGAAGACTCGATGGGA
ATAGAAATGGATGGCACATTCCGCGGGGTGGGCGTCGCATACTTGTAGCA
CCTTCGGCAGGATACGCGAGCGAAGAGTGAGGCGTGCCGGTCTTATTGGA
AAAAGGCAAGGTAGATGGTGTACAGTACAACGCACCATGCGGTGTGATGA
CGCGGGAAATCAACAAAAAAAAATGGCGAGCTACGTGTACGATGTACAAC
TGGGCGGGCTGAAAGAGTAGAAGGTGACATGCCACACACGACGTACCCAA
TAACCGCAGCGTACTGGTTTCGAAGGTTCAAACATGCACGTCACTGCAAG
CAGCAGCAGGCGCACTGTCGTGGGGATCTGCTGCCCGCCGTGTCTTGCTT
CCTCTCGAGCGTTTCCACGGACACAGCCGACGTGAGGAAGTCCTACATAC
ACTGCGAATATCGTAGCGAGCTGCTCCCGCTCAAGAAAACCTTGCTCGCT
TCCCACTGCTGTAGATATACCCCCCCCTCCCTCTTTTTGCCAATTCCCAT
CTGTGGGTTCCGTCTCAGTTTGTCATCGTTTTCTCCTTTTGTCGGTGCGT
GCTGATGACGCCGCCTGCTGCGCGTCTTTCGTGCGATCGATGGACGACGA
AGTGAACGACCGTACGACCGCGCAAAAGAGAAAAAGAAGCAACCCCCCCT
GGGTTGCTATCATAGTACTTCGTATCATTTTGCCTCGGCGGAGGTATTCG
TTCGGCGTTGTTGACTCTTTCTCTTCAACTTTTAAACCCCTCGCCCCGCC
AGATGAAATTCCAAGCGCCGACCCGCCCGGGCTTCGTAAACCTCGTGGTG
TCCGTCAAGAGCCCGGTCTTCGTGGGCGTCGACTGCGAGAGCACGGCCAG
CTTCAGGGTGTGGAGGCACGACGAGCTCAAGGAGGACGACGACGCGGGGG
ACTGGTAGCGAGACAAGCGGGGAAGTCCCTGCGTTCGACGGTGTTGGCTG
CCGTCATCCCGAGCGGGGGGCGCCGTGGAGGTATTGCTGGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1244:22973..28513-

>mRNA_H-canaliculatus_F_contig1244.2075.1 ID=mRNA_H-canaliculatus_F_contig1244.2075.1|Name=mRNA_H-canaliculatus_F_contig1244.2075.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3348bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1244:22973..28513- (Hapterophycus canaliculatus Oshoro5f female)
ATGATGGCGGTGCTAATTGGCTTCGTGATAAGCGTCAAGCTCATGCTGGA
CGTGATGGACCCCGCAGGGGGGCAAAAAAAGCCGGAGTTCGAGGTCACCC
AGGAGGACGTGGAGGCGGTGCTAATTGGCTTCGTGATAAGCGTCAAGCTC
ATGCTGGACGTGATGGACCCCGCAGGGGGGCAAAAAAAGCCGGAGTTCGA
GGTCACCCAGGAGGACGTGGAGGCCTTGCTCAAGAACTTGGACGACACCA
GCTCGGCGGCCGACGTCCTCGAGTGCCTCGCCGCCTGCCCTCAGCTGTGC
TCGGAAGAGCGCCGGGCCCTAGCAGAAGATATGGAACCGATCACCACCCC
CCTCCGCCGGTGGCTCCTGAAGCTGGACGGCGGGGCCCCGCCGTTGCGGG
GTCCCGCATCCTCCTCGCCACCGCCTTCCGCGGGGCCGCCTAAAACCACC
GCACGGAAAGGGAAGGGAAAGGGTTCCAAGAACAAGGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGGGGTGTCGCGTCTGGGGGAGGGAGCACGTCTGCGG
CAGCTCCCGCCACGGCGGCGCAGAAGGAGCCGGAGGTCGAGGGAGAGTTT
TTCAGCCAGGGGAGGAGGGGGCAAGGGAACCGGCGGAGCACCCGGGAGAG
CCCCGAGCTCTCCAAGGTGGTTACGCACAATCTGGTGGTGCTGTTGAGCG
CTCTCCACCGAGCGCCGCCGGACGTCCTAGCCGCCGCTGTTGACGGCGGC
GCGGCGTCCGGCGTTGCCCCAGCACCGGAGACGGCCGTGAGAGAGAAAAA
AGGGAAGGAGTCGTCAGCAGGCGCGGAAGGGGAAGGGCAAGGGGAAGGCG
GAGGTGGGGAAGAAGAAGGCGGGGATTCGTCCTCCGGCGTCGCCGCCGCT
GCCGTTGCTGCGGGCGAGAAGCTGGCAGGGGACCATCCCGGCGCCTTCGT
GGCGTTCGGCGGAGCAAGCGAGACGGCGGCCCCGGCAGCGGGAGGAGGCG
GCGGCGACGAGGGCGATGACGCCGTTTCCCGGCTGCTCTCGGCGGTGGCT
GCGGGCGGACAGCTGGCACGGGAACAGAACTTGATCCTGGGGCTCGCGGA
GCCGCTGCTGGACGCCTGCCTGCAGGTGGCGGCGAAGCGAGCTTCCCCGG
AGCTGTTCGGCACGGTGGTGGAGACCAAGGCCATGCTGAGGCGTCGGCTG
TGGGTGCCGTCGAAGGAGTCCCAGGAGGGGTTCGAGACGGCCACCGCCCT
TGAGAGGCAGGAGAGGGAGGTCGATGCGGACTTCGACGCCGCCGTGCCTC
GCGTCAAGGCCTTGCTCAAGAACTTGGACGACACCAGCTCGGCGGCCGAC
GTCCTCGAGTGCCTCGCCGCCTGCCCTCAGCTGTGCTCGGAAGAGCGCCG
GGCCCTAGCAGAAGATATGGAACCGATCACCACCCCCCTCCGCCGGTGGC
TCCTGAAGCTGGACGGCGGGGCCCCGCCGTTGCGGGGTCCCGCATCCTCC
TCGCCACCGCCTTCCGCGGGGCCGCCTAAAACCACCGCACGGAAAGGGAA
GGGAAAGGGTTCCAAGAACAAGGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GGGGTGTCGCGTCTGGGGGAGGGAGCACGTCTGCGGCAGCTCCCGCCACG
GCGGCGCAGAAGGAGCCGGAGGTCGAGGGAGAGTTTTTCAGCCAGGGGAG
GAGGGGGCAAGGGAACCGGCGGAGCACCCGGGAGAGCCCCGAGCTCTCCA
AGGTGGTTACGCACAATCTGGTGGTGCTGTTGAGCGCTCTCCACCGAGCG
CCGCCGGACGTCCTAGCCGCCGCTGTTGACGGCGGCGCGGCGTCCGGCGT
TGCCCCAGCACCGGAGACGGCCGTGAGAGAGAAAAAAGGGAAGGAGTCGT
CAGCAGGCGCGGAAGGGGAAGGGCAAGGGGAAGGCGGAGGTGGGGAAGAA
GAAGGCGGGGATTCGTCCTCCGGCGTCGCCGCCGCTGCCGTTGCTGCGGG
CGAGAAGCTGGCAGGGGACCATCCCGGCGCCTTCGTGGCGTTCGGCGGAG
CAAGCGAGACGGCGGCCCCGGCAGCGGGAGGAGGCGGCGGCGACGAGGGC
GATGACGCCGTTTCCCGGCTGCTCTCGGCGGTGGCTGCGGGCGGACAGCT
GGCACGGGAACAGAACTTGATCCTGGGGCTCGCGGAGCCGCTGCTGGACG
CCTGCCTGCAGGTGGCGGCGAAGCGAGCTTCCCCGGAGCTGTTCGGCACG
GTGGTGGAGACCAAGGCCATGCTGAGGCGTCGGCTGTGGGTGCCGTCGAA
GGAGTCCCAGGAGGGGTTCGAGACGGCCACCGCCCTTGAGAGGCAGGAGA
GGGAGGTCGATGCGGACTTCGACGCCGCCGTGCCTCGCGTCAAGGTGAAG
AGCGTCGTGGTCGAGACCTGGGGAGAGAGCCAGGTCGCATTGGGAGACAC
GGTCACCGCCACCATCACCATCGCCAGAGAGCACGCTACGGAATACCAGG
GGCTCCGCAGAAGGTGAAGAGCGTCGTGGTCGAGACCTGGGGAGAGAGCC
AGGTCGCATTGGGAGACACGGTCACCGCCACCATCACCATCGCCAGAGAG
CACGCTACGGAATACCAGGGGCTCCGCAGAAGGAGGCCGGAGGCGGGGTC
GTTCATCGCGAAGGGAGAGCCTTGGTGGGTCATCCTAGCCGGCGGGCGCG
GGGGTAACTCGTTGATCAGGGTCACGCCTACGCTGGTGGAGAACCTGGGC
AGCGGTATCGCCGAGTGCAAGGTGCGATCGTTTTTTGCCTGTTTGGCTGG
AGAGTTCATTGTTCAGTGGTTGGTGTGTGCTCATGTGATGCATGGGATGC
CTTTGTGGGTGCAGGTGTGTAGGTCGCCTCGATTGGACGAAGTTTCTTCG
CGTGTCGGAAAGATGGCAAAACATGGCAGCAGTTACACAGTCAATGGAAG
GCTCGGCGTAAGCCGTTCCCTGAAGACTCGATGGGAATAGGAGGCCGGAG
GCGGGGTCGTTCATCGCGAAGGGAGAGCCTTGGTGGGTCATCCTAGCCGG
CGGGCGCGGGGGTAACTCGTTGATCAGGGTCACGCCTACGCTGGTGGAGA
ACCTGGGCAGCGGTATCGCCGAGTGCAAGGTGCGATCGTTTTTTGCCTGT
TTGGCTGGAGAGTTCATTGTTCAGTGGTTGGTGTGTGCTCATGTGATGCA
TGGGATGCCTTTGTGGGTGCAGGTGTGTAGGTCGCCTCGATTGGACGAAG
TTTCTTCGCGTGTCGGAAAGATGGCAAAACATGGCAGCAGTTACACAGTC
AATGGAAGGCTCGGCGTAAGCCGTTCCCTGAAGACTCGATGGGAATAG
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