prot_H-canaliculatus_F_contig12430.2070.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12430.2070.1
Unique Nameprot_H-canaliculatus_F_contig12430.2070.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length84
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12430.2070.1 vs. uniprot
Match: D8LKC4_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC4_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 3.090e-33
Identity = 65/80 (81.25%), Postives = 71/80 (88.75%), Query Frame = 0 
Query:    1 MAEDEASLGKMMEEIETNLPRFDQCINLLKTEISEIKAGKHDDRLREVISRPVPDPALHSALSGAVEGGLSLPAAPRLSE 80
            M EDEA+LGKMMEEIETNLPRFDQCI+LL+ EI EIKAGKHD RLREV + PVPDP LHSAL+ AVEGGL LPAAPRLS+
Sbjct:    1 MEEDEAALGKMMEEIETNLPRFDQCISLLQAEIGEIKAGKHDHRLREVAAMPVPDPNLHSALTSAVEGGLQLPAAPRLSD 80
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12430.2070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKC4_ECTSI3.090e-3381.25Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12430contigH-canaliculatus_F_contig12430:214..1586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12430.2070.1mRNA_H-canaliculatus_F_contig12430.2070.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12430 214..1634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12430.2070.1 ID=prot_H-canaliculatus_F_contig12430.2070.1|Name=mRNA_H-canaliculatus_F_contig12430.2070.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=84bp
MAEDEASLGKMMEEIETNLPRFDQCINLLKTEISEIKAGKHDDRLREVIS
RPVPDPALHSALSGAVEGGLSLPAAPRLSEGESE
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