prot_H-canaliculatus_F_contig1243.2065.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1243.2065.1
Unique Nameprot_H-canaliculatus_F_contig1243.2065.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length145
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1243.2065.1 vs. uniprot
Match: D8LSN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN0_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 5.430e-78
Identity = 108/142 (76.06%), Postives = 119/142 (83.80%), Query Frame = 0 
Query:    3 LTAFVASLIGVEGRYPQDALRCLASLKEPDGLLICPEHRNVYCVKEVSTLGREDCGRTSYFGDKWNSQTGKCEYRKCEKTCEESSWDFEFEGEAYERNRFCCDFDNCNGTRRRFARPGLAAWIPGVVAFLLAQAHRREQQAG 144
            + A VA L  V  RYPQDALRCLASLKEP+GLLICPEHRN YCVKEVS L  EDCGRT+YFGDKWN+QTGKCEYRKCE TC ESSWDFEFEGEAYERNRFCCDF+ CNG  RRF+R G++AW+ GVVA LL   + RE+QAG
Sbjct:    1 MVAAVALLPEVNARYPQDALRCLASLKEPEGLLICPEHRNGYCVKEVSDLAEEDCGRTTYFGDKWNAQTGKCEYRKCEATCLESSWDFEFEGEAYERNRFCCDFNYCNGISRRFSRAGMSAWVSGVVALLLTLLYLREEQAG 142
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BLAST of mRNA_H-canaliculatus_F_contig1243.2065.1 vs. uniprot
Match: A0A482UVN1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVN1_9ARCH)

HSP 1 Score: 57.0 bits (136), Expect = 3.370e-8
Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   73 KCEYRKCEKTCEESSWDFEFEGEAYERNRFCCDFDNCNGTRRRFARPG 120
            +C+++KC  TCEE +++F+FEG  Y R+R+CC+ D CN   R +   G
Sbjct:    4 ECQFKKCSDTCEEETYNFDFEGRTYTRSRYCCNTDFCNAGSRSYGTMG 51
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1243.2065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSN0_ECTSI5.430e-7876.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482UVN1_9ARCH3.370e-843.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1243contigH-canaliculatus_F_contig1243:19032..21053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1243.2065.1mRNA_H-canaliculatus_F_contig1243.2065.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1243 19032..21053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1243.2065.1 ID=prot_H-canaliculatus_F_contig1243.2065.1|Name=mRNA_H-canaliculatus_F_contig1243.2065.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=145bp
IFLTAFVASLIGVEGRYPQDALRCLASLKEPDGLLICPEHRNVYCVKEVS
TLGREDCGRTSYFGDKWNSQTGKCEYRKCEKTCEESSWDFEFEGEAYERN
RFCCDFDNCNGTRRRFARPGLAAWIPGVVAFLLAQAHRREQQAG*
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