prot_H-canaliculatus_F_contig1243.2064.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1243.2064.1
Unique Name	prot_H-canaliculatus_F_contig1243.2064.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	157

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1243.2064.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.090e-30
Identity = 78/143 (54.55%), Postives = 92/143 (64.34%), Query Frame = 0

Query:   18 MADDWDDWGDEDDNSATDDA---SKFSEKSEGWDWPAPCVEKDSAAVAAPATAAGRAAQNNHDSKSTKLDAAAAEAEAREAREVAVEEIAEKYFSELQRYLEDLADPSVREEINQALTKRDYASLHRYYDGREDLADYTLDTE 157
            MADDWDDWGD+D   A  D    S  S+KSEGWDWP     K  +    PA A  +++Q+ +         AA E   REARE  V E+ EK+F EL+ YLE+LADPSVREEINQ L K D+AS  RYYDGR+DLA YTLDTE
Sbjct:    1 MADDWDDWGDDDGEVAVADGGDNSNSSDKSEGWDWPVAATTKPPS----PAIAIQQSSQDEN---------AAVE---REAREAVVAEMTEKFFVELRSYLENLADPSVREEINQELNKCDFASFTRYYDGRDDLATYTLDTE 127

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1243.2064.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1243.2064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JKF0_9PHAE	8.090e-30	54.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.469

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1243	contig	H-canaliculatus_F_contig1243:17528..18780 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1243.2064.1	mRNA_H-canaliculatus_F_contig1243.2064.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1243 17527..18780 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1243.2064.1 ID=prot_H-canaliculatus_F_contig1243.2064.1|Name=mRNA_H-canaliculatus_F_contig1243.2064.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=157bp
GARRVRFVFSRCVVLRVMADDWDDWGDEDDNSATDDASKFSEKSEGWDWP
APCVEKDSAAVAAPATAAGRAAQNNHDSKSTKLDAAAAEAEAREAREVAV
EEIAEKYFSELQRYLEDLADPSVREEINQALTKRDYASLHRYYDGREDLA
DYTLDTE