mRNA_H-canaliculatus_F_contig1241.2047.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 5.540e-149 Identity = 214/256 (83.59%), Postives = 230/256 (89.84%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEE-GYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDSMSMSYSF 865
M RTGFVALAC MLGAANALEV+TPSADL+VVADRTYTVEWTGADSGRFEIDLY+CGSMCMEDSCGDWVTALCPYGE+GCPDNEGDYDIVMPEPM+G SGYKVRVMDV DE MDCSD+F L+ S+DAP AG E GY+L VTSP+ GD AEAGEEYTVEFDYDNGVGSKVDRFSIDLYMA+GDGDCGT+VT+ICDKPSIGCKDSMGDYDVEIP DT +G+Y IRVGRFEDE LY CSG FT+MG D SMSY F
Sbjct: 1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDESMSYDF 256
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 387 bits (995), Expect = 6.560e-126 Identity = 195/267 (73.03%), Postives = 215/267 (80.52%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADS-GRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEE-GYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVM-GDDS---------MSMSYSF 865
M RTGFVALACGMLGAANAL+V TPS L V+ADRTYTVEWTG S RFEIDLYYCGSMCMED CGDWVTALCPYGEDGCPDNEGDYDIVMPEPM G GSGYKVRV D+ DE + DCSD F LL S +AP G+E G L VTSP++GD+A EYTVEFDYDNGVGS VDRF+IDLY A+G+GDCGT+V +ICDKP+IGCKDSMGDYDVEIP DT +GEY IRV RFED++LYSCSG FT+ GDDS S+SY F
Sbjct: 1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDSDXXXXXEDAFSLSYRF 267
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 383 bits (983), Expect = 2.940e-124 Identity = 187/257 (72.76%), Postives = 209/257 (81.32%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSG-RFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGY-YLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDSMSMSYSF 865
MVRTGFVALACGMLG A+ALEV+TP+A +VV+ R YTVEW+G S RFEIDLYYC SMCMED CG+WVTALCPYGEDGCPDNEGDYDIVMPEPM+G GSGYKVRV DV DE DCSD F L+ DAP A + G Y+ VTSPSTGD AEAGEEYTVEFDYDNG+GS V RF+IDLY A G GDCGTF+ T+CDKP+IGCKDSMGDYDVEIPED +G Y+IRVG FEDE++Y CS F ++G D SMSY F
Sbjct: 2 MVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDSSMSYRF 258
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 353 bits (907), Expect = 4.900e-113 Identity = 172/253 (67.98%), Postives = 199/253 (78.66%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDSMSMSY 859
M RT F ALA GMLGAANALEV++P+A +VVAD YTVEWTGA SGR++IDLYYCGS+CMED CGDWVTALCPYG+DGCPD +GDYD+VMPEPM G SGYKV V D DE + CS F L+ S +AP A + G Y+ VTSPS GD A AG EYTVEFDYDNG+GS V+RF+IDLY + G GDCGT+VTTICDKPSIGCKDS GDYDV IP T SG YSIRVG FED+ +Y CS F ++G +SMS+ +
Sbjct: 1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGESMSVRF 252
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 353 bits (906), Expect = 7.390e-113 Identity = 169/255 (66.27%), Postives = 196/255 (76.86%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDSMSMSYSF 865
M RT F A+A GML AANALEV++P + V+ADR YTVEWTG +GRFEIDLYYC S CM+D CGDWVTALCPYG DGCPD+ GDYDI+MPEPM+G SGYKV V + DE +M CSD F L+ S+DAP AGE GY L VTSPS GD A AGE YTVE+DY+NG GS DRF++DLY+ G GDCGT+VTT+CD+PSIGC DS GDYDVEIP DTP+G YSIRVG F+DE +Y CS F V D M++S F
Sbjct: 1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSDDMTISMRF 254
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 352 bits (904), Expect = 3.040e-112 Identity = 170/237 (71.73%), Postives = 194/237 (81.86%), Query Frame = 2
Query: 137 MLGAANALEVITPSADLVVVADRTYTVEWTGADSG-RFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGY-YLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDD 841
MLGAA+ALEV+TP+ +VVA R YTVEWTG S R+EIDLYYCGSMCMED CGDWVTALCPYGEDGCPDNEGDYDIVMPEPM+G GSGYKVRV DV D+ DCSD F L+ +AP AG+ G Y+ VTSPS+GD AEAGEEYTVEFDYDNG+GS V RF+IDLY A G GDCGTF+ T+CDKP+IGCKDSMGDYDVEIPED +G Y+IRVG FED+++Y CS F ++G D
Sbjct: 1 MLGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGAD 237
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.360e-109 Identity = 171/253 (67.59%), Postives = 192/253 (75.89%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYM-AEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDS-MSM 853
M RT F ALA GMLGAANALEV++P+A + V+ADRTYTVEWTG RFEIDLYYCGS CMED CGDWVTALCPYG DGCPD +GDYDIVMPEPM G SGYKV V D DE M CS F L+ S DAP AGE GY L VTSPS GD A AG YTVE+DY+NG+GS DRF+IDLY G GDCGT+V T+CDKPSIGC DS GDYDVEIP DTP+G YS+RVG F D+ ++ CS F ++ D + MSM
Sbjct: 1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMSM 252
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI) HSP 1 Score: 325 bits (832), Expect = 4.650e-102 Identity = 164/235 (69.79%), Postives = 186/235 (79.15%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADS-GRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEE-GYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDS----MGDYDVEIPEDTPSGEYSIRVGRF 787
M RTGFVALACGMLGAANAL+V TPS L V+ADRTYTVEWTG S RFEIDLYYCGSMCMED CGDWVTALCPYGEDGCPDNEGDYDIVMPEPM+G GSGYKVRV D+ DE + DCSD F L+ S +AP G+E G L VTSP++GD+A EYTVEFDYDNGVGS+VDRF+IDLY A+GDGDCGT+V +ICDKP+IGCKDS G + V+ G +S+ V R+
Sbjct: 2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLVLRY 236
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE) HSP 1 Score: 290 bits (743), Expect = 8.230e-89 Identity = 150/255 (58.82%), Postives = 172/255 (67.45%), Query Frame = 2
Query: 101 MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEIDLYYCGSMCMEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAGEEGYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDSMSMSYSF 865
M RT F ALA GMLGA NALEV +P+A ++VA + TVEWTG SGRF+IDLYYCGS+CMED CGDWVTALCPYG+DGCPD +GDYD+VMPEPM G SGYKV V D DE +M CS F L+ S FD+DNG GS V+RFSIDLYM+ G GDCGT+VT+ICDK SIGCKDS GDYDV IP DT SG YSIRVG FED ++ CS F ++G +S SMS F
Sbjct: 1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGES-SMSVRF 253
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE) HSP 1 Score: 274 bits (700), Expect = 2.500e-79 Identity = 132/189 (69.84%), Postives = 149/189 (78.84%), Query Frame = 2
Query: 281 MEDSCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMTGMEGSGYKVRVMDVGDEGEMDCSDSFMLLPSDDAPMAG-EEGYYLMVTSPSTGDVAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMAEGDGDCGTFVTTICDKPSIGCKDSMGDYDVEIPEDTPSGEYSIRVGRFEDEALYSCSGVFTVMGDDS 844
+ED CG+WVTALCPYG +GCPDNEGDYDIVMPEPM+G GSGYKVRV DV + DCSD F L+ S +AP+ G + YLMVTSPS GD A+AG EYTVEFDYDNGVGS+VDRF IDLY G GDCGT+V +CDK +IGCKDSMGDYDVEIPE G YSIRVGRFED+ALY CSG F ++G S
Sbjct: 12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEIVGSSS 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1241.2047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1241.2047.1 >prot_H-canaliculatus_F_contig1241.2047.1 ID=prot_H-canaliculatus_F_contig1241.2047.1|Name=mRNA_H-canaliculatus_F_contig1241.2047.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=256bp MVRTGFVALACGMLGAANALEVITPSADLVVVADRTYTVEWTGADSGRFEback to top mRNA from alignment at H-canaliculatus_F_contig1241:13646..17587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1241.2047.1 ID=mRNA_H-canaliculatus_F_contig1241.2047.1|Name=mRNA_H-canaliculatus_F_contig1241.2047.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3942bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1241:13646..17587- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1241:13646..17587- >mRNA_H-canaliculatus_F_contig1241.2047.1 ID=mRNA_H-canaliculatus_F_contig1241.2047.1|Name=mRNA_H-canaliculatus_F_contig1241.2047.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1536bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1241:13646..17587- (Hapterophycus canaliculatus Oshoro5f female)back to top |