prot_H-canaliculatus_F_contig1240.2039.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1240.2039.1
Unique Nameprot_H-canaliculatus_F_contig1240.2039.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length268
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1240.2039.1 vs. uniprot
Match: D7FUF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF4_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 1.280e-129
Identity = 202/266 (75.94%), Postives = 221/266 (83.08%), Query Frame = 0 
Query:    1 MGAGSGTDFLNSDFPMYAAVAVGASIVYRAYVSKSRGESLQPEYMSKGVFPAVFFTFIGTMACHEMFLDMTGRPGGLTAWAPAVIAVFVASWVAYRGQLAASGGELGLSVIVPVVAFASLAISWLVADEKEPQVNLTKAQLKKAAKEAARKAAKGIQESPN-KMLFLEKGKDVVTEQLHIALGVFVVVALILGLVNGPGVWPRKQLQQGAFPACFMVAAGVLACNSFLRQARTEDTEGSLDDFFPAFAAFSVATLLAHRGSVMQSS 265
            MGA + TDFLNSDFPMYAA  V   I+YRA+V+KSRGE LQP  MSKGVFPA FFTF+G++ACHEM LDM G PGGLTAWAPAV+AV   SWVAYRGQLAASGGELGLSVI PVVA A+L ISWLVADE E   NLTKAQLKKAAK+AA+KAA GI  +   KML+LEKGKDVVTEQLH+ALGV VVV L+L LVNGPGVWPR  LQQGAFPACFM+A+GVLA NSFLRQAR  D  GSLDDFFPAFAA   ATLLA +GS MQ+S
Sbjct:    1 MGARNETDFLNSDFPMYAAGGVTLFIIYRAFVTKSRGEPLQPACMSKGVFPAAFFTFVGSLACHEMLLDMMGYPGGLTAWAPAVLAVVACSWVAYRGQLAASGGELGLSVIAPVVALAALTISWLVADEVEQPQNLTKAQLKKAAKDAAKKAAAGIGAAGGGKMLYLEKGKDVVTEQLHVALGVLVVVVLVLALVNGPGVWPRN-LQQGAFPACFMIASGVLAYNSFLRQARESDG-GSLDDFFPAFAAALAATLLARKGSAMQAS 264
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1240.2039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUF4_ECTSI1.280e-12975.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..267
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 228..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..176
NoneNo IPR availableTMHMMTMhelixcoord: 108..127
NoneNo IPR availableTMHMMTMhelixcoord: 15..33
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 208..227
NoneNo IPR availableTMHMMTMhelixcoord: 78..95
NoneNo IPR availableTMHMMTMhelixcoord: 179..201
NoneNo IPR availableTMHMMTMhelixcoord: 242..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1240contigH-canaliculatus_F_contig1240:10815..15631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1240.2039.1mRNA_H-canaliculatus_F_contig1240.2039.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1240 9787..15631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1240.2039.1 ID=prot_H-canaliculatus_F_contig1240.2039.1|Name=mRNA_H-canaliculatus_F_contig1240.2039.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=268bp
MGAGSGTDFLNSDFPMYAAVAVGASIVYRAYVSKSRGESLQPEYMSKGVF
PAVFFTFIGTMACHEMFLDMTGRPGGLTAWAPAVIAVFVASWVAYRGQLA
ASGGELGLSVIVPVVAFASLAISWLVADEKEPQVNLTKAQLKKAAKEAAR
KAAKGIQESPNKMLFLEKGKDVVTEQLHIALGVFVVVALILGLVNGPGVW
PRKQLQQGAFPACFMVAAGVLACNSFLRQARTEDTEGSLDDFFPAFAAFS
VATLLAHRGSVMQSSPP*
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