prot_H-canaliculatus_F_contig1239.2029.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1239.2029.1
Unique Nameprot_H-canaliculatus_F_contig1239.2029.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length142
Homology
BLAST of mRNA_H-canaliculatus_F_contig1239.2029.1 vs. uniprot
Match: A0A6U3ZS16_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3ZS16_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.080e-8
Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 0
Query:    6 SLTMGSVGKMTTYQLRQEADARGLLKGL-------RHVNHGTLLKRLVQVIVEEEHERGRRGS-------------QGAAGPSHSELEKERNRKERSERKAAAIERSKQRQADLSYFNTKKLSNVKY 112
            ++T+ +V  +T +QLRQE   RG+   +       R +N+   L+ +V  +++E+ ER ++ +              GA  P   E  ++R  +E++ERK AAIERSK+RQAD  YF  +K +N K+
Sbjct:   21 TITLDNVHALTIFQLRQELTRRGIFDDIFGHEGEKRRINYNNCLEVMVGELLKEKDEREKKHALELEEKMRLGKPLDGATTPLEDETLQQRLAREKNERKQAAIERSKKRQADRQYFAARKATNEKH 147          
BLAST of mRNA_H-canaliculatus_F_contig1239.2029.1 vs. uniprot
Match: A0A836CHB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.390e-7
Identity = 61/186 (32.80%), Postives = 85/186 (45.70%), Query Frame = 0
Query:    7 LTMGSVGKMTTYQLRQEADARGLLKGLRHVNHGTLLKRLVQ---------------------VIVEEEHERGRR------------GSQGAAGPSHSELEKERNRKERSERKAAAIERSKQRQADLSYFNTKKLSNVK-YEGKSV---------------VHVSSQQEEE--VSVINPRRHKIFVR 141
            + M +V  +TTYQLRQE + RGLL  L  VN+ TLL+RLVQ                      +VEEE E  R+            G         +   + R R+ER ERK AA++RS  RQ+D +YF +K  +NV   +G S                  +S++  E   +S INPR  K++ R
Sbjct:   14 IDMHNVHTLTTYQLRQEIERRGLLGDLTTVNYNTLLQRLVQESVHDAASLLLCHIHVSTILKALVEEEREAERKETVLLKRLSEVPGIMRCYASRGTLYVQARLRREREERKQAALQRSIARQSDPAYFASKAQANVPPLKGSSAGAXXXXXXXAAEPCDAALSTEDAEPPLISKINPRGFKVYSR 199          
BLAST of mRNA_H-canaliculatus_F_contig1239.2029.1 vs. uniprot
Match: A0A7S2K1Y5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1Y5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.020e-6
Identity = 43/117 (36.75%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    5 MSLTMGSVGKMTTYQLRQEADARG-----LLKGLRHVNHGTLLKRLVQVIVEEEHERGRRGSQGAAGPSHSELEKERNRK------ERSERKAAAIERSKQRQADLSYFNTKKLSNV 110
            M +T+ +V K++ +QLRQE  ARG     + +G   +N+  LL R+VQ++ +E+  +    S+        +LE ER  K      E+++RKAAA+ERS+ RQA+ +YF +K   NV
Sbjct:   10 MVITLENVQKLSVFQLRQELIARGEFLPNVYQGT--INYQVLLARMVQILHDEKEAKDEAQSR--------KLEMERKDKILSLEQEKADRKAAALERSRCRQANKAYFESKHKGNV 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1239.2029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6U3ZS16_9STRA2.080e-833.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CHB1_9STRA1.390e-732.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2K1Y5_9STRA7.020e-636.75Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1239contigH-canaliculatus_F_contig1239:25200..26810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1239.2029.1mRNA_H-canaliculatus_F_contig1239.2029.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1239 25200..26810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1239.2029.1 ID=prot_H-canaliculatus_F_contig1239.2029.1|Name=mRNA_H-canaliculatus_F_contig1239.2029.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=142bp
MARNMSLTMGSVGKMTTYQLRQEADARGLLKGLRHVNHGTLLKRLVQVIV
EEEHERGRRGSQGAAGPSHSELEKERNRKERSERKAAAIERSKQRQADLS
YFNTKKLSNVKYEGKSVVHVSSQQEEEVSVINPRRHKIFVR*
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