mRNA_H-canaliculatus_F_contig12371.2020.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.850e-37 Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPV-EPVDDY-----LGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+GRECWCGS Y +G+ DC AC GDA E CGG A+VY + + P P D LGC++DDR+ RI+ ++ +S SM LC+ C G F +ATQ+GRECWCGS Y L+G+ TD C AC GDA + CGG A+VY Y
Sbjct: 244 TTELCEQTCVGN--TYFATQYGRECWCGSA--GADYASHGE--SADCTYACAGDADETCGGFDAANVYLYTGESTPSPTPSPTADESGPLSLGCYEDDRENRIMDDLA-LSDFSMTTELCEQTCLGNTF--FATQYGRECWCGSA--GADYTLHGESTD--CTYACAGDADQTCGGFDAANVYLY 415
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 144 bits (364), Expect = 9.210e-37 Identity = 78/185 (42.16%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAF--DNDEAVDPVEPVDDY----LGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C+GQ Y+ATQ+GRECWCGS Y L+G+ TD C AC GDA + CGG A+VY + ++ + P DD LGC++DDR+ RI+ ++ +S ++M LC+ C G Y+ATQ+G+ECWCGS Y L+G+ DC AC GDA + CGG A+VY Y
Sbjct: 551 TTELCELTCNGQ--TYFATQYGRECWCGSA--GADYTLHGESTD--CTYACVGDADQTCGGFDAANVYLYAAESTPSPTPSPTADDAGPLALGCYEDDREDRIMDDLA-LSDNAMTTELCEQTCLGN--IYFATQYGQECWCGSA--GADYILHGE--SADCTYACAGDADQTCGGFDAANVYLY 722
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 136 bits (343), Expect = 2.130e-36 Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDY-----LGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+GRECWCGS Y ++G+ TD C AC+GDA + CGG A+VY + +D + LGC+ DDR+ RI+ ++ +S SM LC+ C G Y+ATQ+GRECWCGS Y L+G+ T+ C C+GDA + CGG A+VY +
Sbjct: 12 TTELCEQTCVGS--IYFATQYGRECWCGS--VGADYTVHGESTD--CTYACSGDADQTCGGFDAANVYRYTDDSTPSXXXXXTEAAPFVALGCYGDDREARIMDDLV-LSDSSMTTELCELTCLGS--TYFATQYGRECWCGS--DGADYALHGESTE--CTYPCSGDADQLCGGFDAANVYLF 182
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 139 bits (349), Expect = 8.740e-36 Identity = 76/184 (41.30%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPV-EPVDD----YLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+ RECWCGS Y L+G+ T C AC+GD S+ CGG A+VY + +D P P+ + LGC+ DD + RI+ ++ +S SM LC+ C+G Y+ATQ+GRECWCGS Y L+G+ TD C AC+GD + CGG A+VY Y
Sbjct: 223 TTELCELTCVGS--TYFATQYRRECWCGSADA--DYALHGESTG--CTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLV-LSDSSMTTELCELTCEGS--TYFATQYGRECWCGSA--GADYALHGESTD--CTYACSGDTDQTCGGFDAANVYRY 393
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FUE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI) HSP 1 Score: 124 bits (311), Expect = 6.370e-33 Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDYLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+GRECWCGS Y L+G+ TD C C G+A + CGG A+VY + N+ P ++GC+QD+ D R++ E+ SM +C+ C G Y+ Q+G EC+CG + NL CD C GD+ ++CGG SVY+Y
Sbjct: 2 TTELCELTCLGS--TYFATQYGRECWCGSA--GMDYALHGESTD--CTYGCAGNADQTCGGFDAANVYRYTNEST-----PTSSFVGCYQDESDARMM-ELALTDSSSMTKEMCEAECTGN--RYFGMQYGSECFCGGSST----NLLENGESSACDYECPGDSEQECGGFYAMSVYSY 162
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI) HSP 1 Score: 126 bits (316), Expect = 3.670e-31 Identity = 73/179 (40.78%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 SIQFCKDLCDGQ--GFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDYLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVY 531
S ++C G + YY TQ+ +CWCG Y+ G +CDMAC+GDASE CGG SVY E VDPV+P YLGC+ D D+RI E+ S D M + +C C + YY TQ+ +CWCG Y+ G +CDM C+GD+SE CGG SVY
Sbjct: 125 SDDMTSEICLGNCGAYQYYGTQYSTQCWCGDNAD---YDANGA---GECDMACSGDASEICGGFYTMSVY-----ENVDPVDP--SYLGCYSDPADSRIF-ELVATS-DDMTSEICLGNCGA--YQYYGTQYSTQCWCGDNAD---YDANGA---GECDMDCSGDSSEICGGFYSMSVY 280
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 127 bits (320), Expect = 7.240e-31 Identity = 76/204 (37.25%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 13 CKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDD-------------------------------YLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVY 531
C C + YY TQFG ECWCG+ Y++YG+ T CDM CTGD+S+ CGG S Y+ V+ PV D YLGCF D + R+ + SM +C C + YY TQFG ECWCG+ Y++YG+ T CDM CTGD+SEKCGG SVY
Sbjct: 610 CASTC--ADYAYYGTQFGGECWCGNNAD---YDVYGEAT---CDMGCTGDSSDICGGFNAMSFYS--TGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPTEPGYLGCFGDSQADRVFSVVTGSG--SMTTAICASTCAD--YAYYGTQFGGECWCGNNA---AYDVYGEAT---CDMGCTGDSSEKCGGFNAMSVY 793
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 125 bits (315), Expect = 3.450e-30 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDYLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+GRECWCGS Y L+G+ TD C AC GDA + CGG A+VY + D P ++GC+QD+ D RI+ E+ SM +C+ C G F + Q+GREC+CG + +L C+ C GD+ + CGG SVY+Y
Sbjct: 657 TTELCEQTCLGN--TYFATQYGRECWCGSA--GVEYALHGESTD--CTYACAGDADQTCGGFDAANVYRY-----TDESTPTSSFVGCYQDESDARIM-ELALTDSSSMTKEMCEAECTGNTF--FGMQYGRECFCGGSST----DLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 817
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: UPI0008F9DAB6 (uncharacterized protein LOC109031490 isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9DAB6) HSP 1 Score: 125 bits (315), Expect = 3.600e-30 Identity = 67/180 (37.22%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 7 QFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDYLGCFQDDRDT-----RILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVY 531
Q C ++C GF QF REC+C + +L Q + CD+ C+G+A+++CGG+L+ V+A A+D + P +LGCF+++ D RI PE + LD++ LC D+C GF Y QFG+EC+C S P + + Q + C+M C GDAS++CGG L+ +VY
Sbjct: 172 QLCMEVCFRAGFKLSGVQFKRECYCSD----KALDLTKQTDEGTCDLPCSGNANQRCGGVLRLDVFAT-GWTAIDSL-PRGFHLGCFKENSDAISDAMRIFPEYRQ-DLDNLTPKLCTDVCSRNGFAYAGVQFGKECYCSS-MPVD---MTKQTDEKTCNMPCAGDASQRCGGTLRLNVY 340
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.090e-29 Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 1 SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYAFDNDEAVDPVEPVDDYLGCFQDDRDTRILPEMQPISLDSMGATLCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMACTGDASEKCGGILKASVYTY 537
+ + C+ C G Y+ATQ+GRECWCGS Y L+G+ TD C AC GDA + CGG A+VY++ ++ + ++GC+QD+ +RI+ E+ SM +C+ C G Y+ Q+GREC+CG + +L C+ C GD+ + CGG SVY+Y
Sbjct: 230 TTELCELTCLGS--TYFATQYGRECWCGSADM--DYALHGESTD--CTYACAGDADQTCGGFDAANVYSYTDESTA-----ISAFVGCYQDESGSRIM-ELALTDSSSMSMEMCEAKCRGN--TYFGLQYGRECFCGGSST----DLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 390 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12371.2020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12371.2020.1 >prot_H-canaliculatus_F_contig12371.2020.1 ID=prot_H-canaliculatus_F_contig12371.2020.1|Name=mRNA_H-canaliculatus_F_contig12371.2020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=180bp SIQFCKDLCDGQGFDYYATQFGRECWCGSGTPAETYNLYGQLTDVDCDMAback to top mRNA from alignment at H-canaliculatus_F_contig12371:553..1710+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12371.2020.1 ID=mRNA_H-canaliculatus_F_contig12371.2020.1|Name=mRNA_H-canaliculatus_F_contig12371.2020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1158bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12371:553..1710+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12371:553..1710+ >mRNA_H-canaliculatus_F_contig12371.2020.1 ID=mRNA_H-canaliculatus_F_contig12371.2020.1|Name=mRNA_H-canaliculatus_F_contig12371.2020.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1080bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12371:553..1710+ (Hapterophycus canaliculatus Oshoro5f female)back to top |