mRNA_H-canaliculatus_F_contig12368.2017.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12368.2017.1
Unique NamemRNA_H-canaliculatus_F_contig12368.2017.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A0A0VDF3_SACJA (Pyruvate, phosphate dikinase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0A0VDF3_SACJA)

HSP 1 Score: 216 bits (549), Expect = 4.480e-63
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +VI+EIKKKKG+KLDLEMEA DWKEVV  FKKLNPNVPTDPREQLRGA+LAVFRSWNNDRAIRYRSYNGIPD WGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG
Sbjct:  247 EVITEIKKKKGVKLDLEMEAHDWKEVVDRFKKLNPNVPTDPREQLRGAVLAVFRSWNNDRAIRYRSYNGIPDEWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 357          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A097IU19_9PHAE (Pyruvate, phosphate dikinase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IU19_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 3.510e-62
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +V+  IK +KG+KLDLEM+A DWKEVVGEFKKLNPNVPTDPREQLRGA+LAVFRSWNNDRAIRYRSYNGIPD WGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG
Sbjct:  220 EVLDRIKARKGVKLDLEMDAEDWKEVVGEFKKLNPNVPTDPREQLRGAVLAVFRSWNNDRAIRYRSYNGIPDEWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 330          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A097IU13_9PHAE (Pyruvate, phosphate dikinase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IU13_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 3.930e-62
Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +VI+E+KKKKGIKLD+EM+A+DWKEVV EFKKLNPNVP DPREQLRGAILAVFRSWNNDRAIRYRSYNGIPD WGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG
Sbjct:  233 EVITEMKKKKGIKLDVEMQAADWKEVVEEFKKLNPNVPDDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDEWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 343          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A097IU36_9PHAE (Pyruvate, phosphate dikinase n=6 Tax=Sargassum TaxID=3015 RepID=A0A097IU36_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 7.680e-61
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +VI+ IKK+KGIKLDLEMEA+DWKEV  EFKKLNPNVP+DPREQLRGAILAVFRSWNNDRAIRYRSYN IPD WGTAV+VQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG
Sbjct:  203 EVITSIKKRKGIKLDLEMEAADWKEVAEEFKKLNPNVPSDPREQLRGAILAVFRSWNNDRAIRYRSYNNIPDEWGTAVNVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 313          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A097IU01_9PHAE (Pyruvate, phosphate dikinase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IU01_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.850e-60
Identity = 97/111 (87.39%), Postives = 108/111 (97.30%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +VI+EIKKKKG+KLDLE++ASDWK+VV EFKK+NPNVP DPREQLRGA+LAVF+SWNNDRAIRYRSYNGIPD+WGTAVSVQAMAYGNMND CGTGVAFSRNPSTGE+KFFG
Sbjct:  198 EVITEIKKKKGVKLDLELDASDWKQVVEEFKKINPNVPQDPREQLRGAVLAVFKSWNNDRAIRYRSYNGIPDSWGTAVSVQAMAYGNMNDECGTGVAFSRNPSTGEDKFFG 308          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A6H5L2G0_9PHAE (Pyruvate, phosphate dikinase n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6H5L2G0_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 5.110e-53
Identity = 94/111 (84.68%), Postives = 97/111 (87.39%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +VI +IKKKKGIKLDLEMEASDWK+VV EFKKLNPNVP DPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAM           GVAFSRNPSTGENKFFG
Sbjct:  245 EVIDKIKKKKGIKLDLEMEASDWKQVVAEFKKLNPNVPMDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMXXXXXXXXXXXGVAFSRNPSTGENKFFG 355          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: V2YAA4_9FIRM (Pyruvate, phosphate dikinase n=4 Tax=Bacteria TaxID=2 RepID=V2YAA4_9FIRM)

HSP 1 Score: 143 bits (360), Expect = 2.590e-37
Identity = 69/116 (59.48%), Postives = 90/116 (77.59%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFK-----KLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            Q+I ++K+KKG+  D+E++A+D KE+ G+FK     K+  + P+DP+EQL GAI AVFRSWNN RAI YR  N IP +WGTAV+VQ+MA+GNM D CGTGVAF+RNP+TGE K  G
Sbjct:  155 QLIDKMKEKKGVTQDVELDANDLKELAGQFKAEYKEKIGADFPSDPKEQLMGAIKAVFRSWNNPRAIVYRRMNDIPGSWGTAVNVQSMAFGNMGDDCGTGVAFTRNPATGEKKLMG 270          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A7C4Y918_9BACT (Pyruvate, phosphate dikinase n=1 Tax=candidate division WOR-3 bacterium TaxID=2052148 RepID=A0A7C4Y918_9BACT)

HSP 1 Score: 142 bits (357), Expect = 6.640e-37
Identity = 68/116 (58.62%), Postives = 89/116 (76.72%), Query Frame = 1
Query:    1 QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNV-----PTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            ++I ++K++KG+KLD+E++A DWK VV  +KKL  +V     P DP+EQL GAI AVF+SWNN RAI YR  + IPD WGTA +VQAM +GN+ +  GTGVAF+RNPSTGEN F+G
Sbjct:  156 KIIEKVKEEKGVKLDIELDAEDWKRVVENYKKLVKDVTKKDFPQDPKEQLWGAIEAVFKSWNNKRAIEYRKIHKIPDDWGTACNVQAMVFGNLGENSGTGVAFTRNPSTGENVFYG 271          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: A0A847VSF9_9FIRM (Pyruvate, phosphate dikinase n=2 Tax=Erysipelotrichia bacterium TaxID=2184014 RepID=A0A847VSF9_9FIRM)

HSP 1 Score: 141 bits (356), Expect = 9.010e-37
Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 1
Query:    4 VISEIKKKKGIKLDLEMEASDWKEVVGEFK-----KLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +I EIK++KG+KLD E+ A+D KE+V +FK      +  + P DP+ QL  A++AVFRSWNNDRAI YR  N IP +WGTAV++Q M +GNM D CGTGVAF+RNP+TGENK FG
Sbjct:  156 IIDEIKEEKGVKLDTELCANDMKEMVAKFKAYYKESVGEDFPQDPKVQLMKAVIAVFRSWNNDRAIYYRRMNDIPSSWGTAVNIQMMVFGNMGDDCGTGVAFTRNPATGENKLFG 270          
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Match: UPI000590B25B (pyruvate, phosphate dikinase n=1 Tax=Candidatus Soleaferrea massiliensis TaxID=1470354 RepID=UPI000590B25B)

HSP 1 Score: 140 bits (353), Expect = 2.290e-36
Identity = 69/115 (60.00%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    4 VISEIKKKKGIKLDLEMEASDWKEVVGEFK-----KLNPNVPTDPREQLRGAILAVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSRNPSTGENKFFG 333
            +I E+K+KKG+KLD E++A D KE+V  FK     +LN   P+ P +QL GA+ AVFRSWNN RAI YR  N IP +WGTAV+VQAM +GNM D  GTGVAF+R+P+TGENK FG
Sbjct:  156 IIDEVKEKKGVKLDTELDAEDLKELVVRFKNYYKEQLNSEFPSTPHDQLMGAVKAVFRSWNNPRAIYYRRMNDIPSSWGTAVNVQAMVFGNMGDDSGTGVAFTRDPATGENKLFG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12368.2017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0VDF3_SACJA4.480e-6392.79Pyruvate, phosphate dikinase n=1 Tax=Saccharina ja... [more]
A0A097IU19_9PHAE3.510e-6290.09Pyruvate, phosphate dikinase n=1 Tax=Desmarestia v... [more]
A0A097IU13_9PHAE3.930e-6291.89Pyruvate, phosphate dikinase n=1 Tax=Ishige okamur... [more]
A0A097IU36_9PHAE7.680e-6190.09Pyruvate, phosphate dikinase n=6 Tax=Sargassum Tax... [more]
A0A097IU01_9PHAE3.850e-6087.39Pyruvate, phosphate dikinase n=1 Tax=Dictyopteris ... [more]
A0A6H5L2G0_9PHAE5.110e-5384.68Pyruvate, phosphate dikinase n=3 Tax=Ectocarpales ... [more]
V2YAA4_9FIRM2.590e-3759.48Pyruvate, phosphate dikinase n=4 Tax=Bacteria TaxI... [more]
A0A7C4Y918_9BACT6.640e-3758.62Pyruvate, phosphate dikinase n=1 Tax=candidate div... [more]
A0A847VSF9_9FIRM9.010e-3759.13Pyruvate, phosphate dikinase n=2 Tax=Erysipelotric... [more]
UPI000590B25B2.290e-3660.00pyruvate, phosphate dikinase n=1 Tax=Candidatus So... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12368contigH-canaliculatus_F_contig12368:2273..3472 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.8
Seed ortholog evalue5.6e-45
Seed eggNOG ortholog2880.D8LI11
Preferred namePPDK
KEGG rclassRC00002,RC00015
KEGG koko:K01006
KEGG ReactionR00206
KEGG Pathwayko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200
KEGG ModuleM00169,M00171,M00172,M00173
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.pyruvate, phosphate dikinase activity
EggNOG OGs2QREJ@2759,COG1080@1
EC2.7.9.1
COG Functional cat.G
BiGG ReactioniRC1080.CRv4_Au5_s10_g148_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPyruvate, phosphate dikinase
Ec32 orthologEc-18_001310.1
Exons2
Model size342
Cds size342
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928951.9272883-CDS-H-canaliculatus_F_contig12368:2272..23471622928951.9272883-CDS-H-canaliculatus_F_contig12368:2272..2347Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12368 2273..2347 +
1696845626.8786917-CDS-H-canaliculatus_F_contig12368:2272..23471696845626.8786917-CDS-H-canaliculatus_F_contig12368:2272..2347Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12368 2273..2347 +
1622928951.9523604-CDS-H-canaliculatus_F_contig12368:3205..34721622928951.9523604-CDS-H-canaliculatus_F_contig12368:3205..3472Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12368 3206..3472 +
1696845626.8957555-CDS-H-canaliculatus_F_contig12368:3205..34721696845626.8957555-CDS-H-canaliculatus_F_contig12368:3205..3472Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12368 3206..3472 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12368.2017.1prot_H-canaliculatus_F_contig12368.2017.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12368 2273..3472 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12368.2017.1

>prot_H-canaliculatus_F_contig12368.2017.1 ID=prot_H-canaliculatus_F_contig12368.2017.1|Name=mRNA_H-canaliculatus_F_contig12368.2017.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=114bp
QVISEIKKKKGIKLDLEMEASDWKEVVGEFKKLNPNVPTDPREQLRGAIL
AVFRSWNNDRAIRYRSYNGIPDAWGTAVSVQAMAYGNMNDGCGTGVAFSR
NPSTGENKFFGGE*
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mRNA from alignment at H-canaliculatus_F_contig12368:2273..3472+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12368.2017.1 ID=mRNA_H-canaliculatus_F_contig12368.2017.1|Name=mRNA_H-canaliculatus_F_contig12368.2017.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1200bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12368:2273..3472+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGATCTCTGAGATCAAGAAAAAGAAGGGGATCAAGCTCGACTTGGA GATGGAGGCGTCGGATTGGAAGGAGGTAAGAGGACGACACACGGCGGAAG CTGAAAAAACGGAAGTGGATGTTGTCCAGAAGAAGCTCTGTGGACAGCAT GGCATGATCCCGCAAAGCTGTGAACGGCTTGAAAGAACTGCACGGGAAGA TGTGTAGCGTTGAGTCGGGTTCTTCGGAAACTCTCAAGGATCTTTCGGCA CCTTTTACAAAGCCCGCGGCTGGAAATGTGCCTGCTGGAAGGAGTCAGGG AATACCTTAGGCACACCTATGTTTCCCTTTCCACATGGCACGTCAACGAC GGCGTTCGCTCGGCATGACTGGAAGATCAGCAGCGAGAGGGGGCGGGTGG TGGTACGCCTGCTGCTCGTGGTGAGGCGATAGCTCTGGGTCGTGCTGAAA GCTGAAGGAATGGCCGGCGAACAGCAAAGCTAATAGGTTCCCTTGTCGGC CACCACGAGCAGCATGCGCACCATGACCCGCCCCCTCTCGCTGCTGATCT TCCGATCATGCCGAGCGAACGCCGTCGTTGACGTGCCGTGTCCCTCGCCA CCCTCCCTCGCGCTCCCTCTAACGCCGGTTGCCGGAACAAGCAATCCTGT CGTCCTTTTCCCGTGAACGAAGAAAAAAATTGAAGAAAAAAAAACGGTGC TTGTGAACGAAAGAAAGAGGAAAAAGGAAGGTAAACGAAAGAGAAAAAAG AAAAAGGTCAACGAAAGAAGAGAAAAAAATGGACGAAGACGAGCGCAGAC GAGCGGGTTGGCCGGCCGGCCGGCCGGCCGGCCTATGCCTGGCCCACCCT TCCCCTCTCCTTCGGTATCGACATTTGAAGAGGCAAAACGTTTTTTTTTC GTGACTCTCTTTCGACAAAAAAAATTAAAAAAGGTCGTCGGCGAGTTCAA GAAGCTCAACCCGAACGTCCCAACCGACCCGAGGGAGCAGCTCCGTGGCG CCATCCTCGCGGTGTTCCGGTCCTGGAACAACGACCGCGCCATCCGCTAC CGGTCGTACAACGGCATCCCTGATGCGTGGGGCACCGCCGTATCGGTGCA GGCCATGGCCTACGGCAACATGAACGACGGCTGCGGTACGGGGGTGGCTT TCTCGAGGAACCCTTCCACTGGAGAGAACAAGTTCTTTGGCGGTGAGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12368:2273..3472+

>mRNA_H-canaliculatus_F_contig12368.2017.1 ID=mRNA_H-canaliculatus_F_contig12368.2017.1|Name=mRNA_H-canaliculatus_F_contig12368.2017.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=684bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12368:2273..3472+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGATCTCTGAGATCAAGAAAAAGAAGGGGATCAAGCTCGACTTGGA
GATGGAGGCGTCGGATTGGAAGGAGCAGGTGATCTCTGAGATCAAGAAAA
AGAAGGGGATCAAGCTCGACTTGGAGATGGAGGCGTCGGATTGGAAGGAG
GTCGTCGGCGAGTTCAAGAAGCTCAACCCGAACGTCCCAACCGACCCGAG
GGAGCAGCTCCGTGGCGCCATCCTCGCGGTGTTCCGGTCCTGGAACAACG
ACCGCGCCATCCGCTACCGGTCGTACAACGGCATCCCTGATGCGTGGGGC
ACCGCCGTATCGGTGCAGGCCATGGCCTACGGCAACATGAACGACGGCTG
CGGTACGGGGGTGGCTTTCTCGAGGAACCCTTCCACTGGAGAGAACAAGT
TCTTTGGCGGTGAGTAAGTCGTCGGCGAGTTCAAGAAGCTCAACCCGAAC
GTCCCAACCGACCCGAGGGAGCAGCTCCGTGGCGCCATCCTCGCGGTGTT
CCGGTCCTGGAACAACGACCGCGCCATCCGCTACCGGTCGTACAACGGCA
TCCCTGATGCGTGGGGCACCGCCGTATCGGTGCAGGCCATGGCCTACGGC
AACATGAACGACGGCTGCGGTACGGGGGTGGCTTTCTCGAGGAACCCTTC
CACTGGAGAGAACAAGTTCTTTGGCGGTGAGTAA
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