mRNA_H-canaliculatus_F_contig12358.2007.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: D8LIL3_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL3_ECTSI) HSP 1 Score: 241 bits (616), Expect = 5.490e-75 Identity = 119/126 (94.44%), Postives = 126/126 (100.00%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASI 378
RFSIDLM+CDIPESTLIGNLRDMVNSE+LSDVTF+VEG+PV+AHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDE+DVEL+VAMELFQAADQFGVDRLKRMCESTMLASI
Sbjct: 318 RFSIDLMSCDIPESTLIGNLRDMVNSELLSDVTFIVEGKPVHAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDELDVELEVAMELFQAADQFGVDRLKRMCESTMLASI 443
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A7S2C711_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C711_9STRA) HSP 1 Score: 225 bits (574), Expect = 6.580e-72 Identity = 110/184 (59.78%), Postives = 135/184 (73.37%), Query Frame = 1
Query: 4 FSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
F DLM+C+IP S+L+ +L+ +VN ++L+D+TF+VEG P+YAHK+LCMRCTYF+AMLTGEM+ESRA I LPDVR PIFLA+LEYLYTD+V+V LD+AMELFQ AD FGV+RLK++CE MLASI NFD VTKTA FEEMGRTN+ELVFEIL+ R
Sbjct: 37 FGFDLMSCEIPPSSLVSDLKALVNDQVLNDITFVVEGRPIYAHKILCMRCTYFKAMLTGEMRESRATEIVLPDVRYPIFLAMLEYLYTDQVNVPLDIAMELFQTADHFGVERLKKICEYKMLASINVDNAASIFHAADLHNAKSLREKCLNFILANFDPVTKTACFEEMGRTNVELVFEILQKR 220
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A7S2BYV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYV7_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.630e-70 Identity = 125/184 (67.93%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 4 FSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
F ++L+ CDIP S+L+ +LR +VN+E +SD+ FMVE +PVYAHK+LCMRCTYFRAMLTG M E+RA I L DVR PIFLALLEYLYTD+ ++ LD+AMELFQAADQFGV+RLK++CES MLASI XXXXXXXXXXXXXXX NFD VTK+A FEEMGRTN+ELVFEIL+ R
Sbjct: 64 FGLNLLACDIPPSSLVQDLRSLVNNEEMSDIVFMVEDQPVYAHKILCMRCTYFRAMLTGGMSETRASEIVLQDVRHPIFLALLEYLYTDQCEIPLDIAMELFQAADQFGVERLKKICESKMLASINVENAATIXXXXXXXXXXXXXXXCLNFVLANFDPVTKSASFEEMGRTNVELVFEILQKR 247
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A835Z0K9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K9_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.690e-69 Identity = 144/185 (77.84%), Postives = 163/185 (88.11%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
+F DLM CDIP STL+ +L+ +V++E+LSD+TFMVEG+PVYAHK+LCMRCTYFRAMLTG M ESRAK + L DVRRPIFLALL+YLYTDE D+ LD AMELFQAAD+FGV+RLKR+CES MLASI XXXXXXXXXXXXXXXXXXXXXXXXXXXX FD VTK+ FEEMGRTNIELVFEIL+ R
Sbjct: 317 KFGADLMCCDIPPSTLVEDLKGLVDNELLSDITFMVEGQPVYAHKILCMRCTYFRAMLTGSMVESRAKEVVLEDVRRPIFLALLQYLYTDEADIALDDAMELFQAADRFGVERLKRICESQMLASINVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDLVTKSRAFEEMGRTNIELVFEILKMR 501
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A7S2XZ71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ71_9STRA) HSP 1 Score: 224 bits (570), Expect = 4.170e-69 Identity = 131/185 (70.81%), Postives = 149/185 (80.54%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
RF +DL CDIP STLI +L VN++ LSD TF+VE +PVYAHK+LCMRC YF+AM GEM+ESRA+ I + DVR PIFLALLEYLYTDE+ + LD+AMELFQAADQFGV+RLK+MCE MLASI XXXXXXXXXXXXXXXXXX NFDAVTKT DFEEMGRT+I+LVFEILR R
Sbjct: 204 RFGVDLTWCDIPHSTLITDLSQYVNNDTLSDCTFIVENKPVYAHKILCMRCPYFKAMFMGEMRESRAREIVIQDVRHPIFLALLEYLYTDEITIPLDIAMELFQAADQFGVERLKKMCEGKMLASISIENAAXXXXXXXXXXXXXXXXXXLNFILANFDAVTKTPDFEEMGRTSIDLVFEILRQR 388
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: F0Y4D1_AURAN (BTB domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D1_AURAN) HSP 1 Score: 217 bits (553), Expect = 1.580e-65 Identity = 130/176 (73.86%), Postives = 146/176 (82.95%), Query Frame = 1
Query: 28 DIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
DIP S+LI +LR +V+SE LSDVTF+V+G PV AHKVLCMRC+YFRA+LTGEM ESRA I + DVR PIFLALLEYLYTD VD+ LD+AMELFQAADQFGV+RLKRMCES MLASI XXXXXXXXXXXXXXXXX NFDAVT+TA FEEMGR N+ELVFEIL++R
Sbjct: 304 DIPASSLITDLRQLVDSETLSDVTFLVDGLPVRAHKVLCMRCSYFRALLTGEMLESRASEIAINDVRHPIFLALLEYLYTDNVDIALDIAMELFQAADQFGVERLKRMCESKMLASIHVENAATXXXXXXXXXXXXXXXXXLNFILTNFDAVTRTASFEEMGRVNVELVFEILKSR 479
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A7S2SJA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJA3_9STRA) HSP 1 Score: 212 bits (539), Expect = 7.160e-63 Identity = 102/185 (55.14%), Postives = 132/185 (71.35%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
RF D + CD+P STLI +LR +VNSE LSD+TF+VEG+PV+AHK++C+RC YFRAMLTGEM+E+R K I L DVR +FL+LLEYLYTD++D+ ++ AMELFQAAD+FGV+RLKRMCE+ ML+SI NFDAV KT FE++GRTN++L+FEI + R
Sbjct: 357 RFGPDQLACDVPTSTLIDDLRQLVNSETLSDITFLVEGKPVHAHKIMCIRCEYFRAMLTGEMREAREKEIVLQDVRYQVFLSLLEYLYTDQIDIRVEEAMELFQAADRFGVERLKRMCENAMLSSINIDNAASILLAADLYDATSLREKCLLFIISNFDAVIKTQSFEDLGRTNVDLMFEIFQKR 541
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A3F2S3I9_9STRA (BTB domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3I9_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.890e-62 Identity = 105/185 (56.76%), Postives = 131/185 (70.81%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
RF D +IPESTLI +LR +V+++I+SDVTF+VEG PVY HK+LC+RC+YF AMLTGEM ESRA+ I + DVRR IF++LLEYLYTD +DV +DVAMELF AD++GV+RLKR+CES ML+S+ NFDAVTKT FEEMGRTN+ELVFE+L+ R
Sbjct: 195 RFGEDEFKMEIPESTLINDLRALVDNDIMSDVTFIVEGIPVYGHKILCIRCSYFNAMLTGEMLESRAREIQITDVRRQIFISLLEYLYTDHLDVAVDVAMELFVTADRYGVERLKRICESKMLSSLCIDNAASIFHAADLHNATVLRDQCVAFMLQNFDAVTKTDAFEEMGRTNVELVFELLKRR 379
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: K3WUC3_GLOUD (BTB domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUC3_GLOUD) HSP 1 Score: 207 bits (526), Expect = 1.930e-61 Identity = 101/176 (57.39%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 28 DIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
DIPESTLI +LR +VNSE++SD+TF+VEG P+YAHK+LCMRC YF+AMLT +M ESRA+ + + D+RRPIFL+ LEYLY+D +DV +DVAMELF AAD++GVDRLK +CES ML S+ NFDAVTKT FEEMGRTN++LVFE+L+ R
Sbjct: 313 DIPESTLISDLRALVNSEVMSDITFVVEGIPIYAHKILCMRCNYFKAMLTSDMLESRAREVEITDIRRPIFLSFLEYLYSDYLDVSVDVAMELFVAADRYGVDRLKHICESRMLGSLCIENVATILHAADLHNATVLRDQCIAFMLNNFDAVTKTNAFEEMGRTNVDLVFELLKRR 488
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Match: A0A8K1CLD1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLD1_PYTOL) HSP 1 Score: 206 bits (525), Expect = 2.900e-61 Identity = 103/185 (55.68%), Postives = 129/185 (69.73%), Query Frame = 1
Query: 1 RFSIDLMTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAMLTGEMKESRAKTITLPDVRRPIFLALLEYLYTDEVDVELDVAMELFQAADQFGVDRLKRMCESTMLASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTKTADFEEMGRTNIELVFEILRNR 555
RF D DIPESTLI +LR +VN++I+SD+ F+VE P+YAHK+LCMRC YF+AMLTGEM ESRA+ I + D+RRPIFLA LEYLY+D++DV ++ AMELF AD++GVDRLKR+CE ML S+ NFDAVTKTA FEEMGRTN++LVFE+L+ R
Sbjct: 307 RFGQDEFELDIPESTLIPDLRMLVNNQIMSDIVFIVEDMPIYAHKILCMRCGYFKAMLTGEMLESRAREIVITDIRRPIFLAFLEYLYSDDIDVSVESAMELFVVADRYGVDRLKRICERRMLQSLCVDNAASILHAADLHNASVLRDQCLAFMLNNFDAVTKTAAFEEMGRTNVDLVFELLKRR 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12358.2007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12358.2007.1 >prot_H-canaliculatus_F_contig12358.2007.1 ID=prot_H-canaliculatus_F_contig12358.2007.1|Name=mRNA_H-canaliculatus_F_contig12358.2007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=180bp MTCDIPESTLIGNLRDMVNSEILSDVTFMVEGEPVYAHKVLCMRCTYFRAback to top mRNA from alignment at H-canaliculatus_F_contig12358:437..3652+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12358.2007.1 ID=mRNA_H-canaliculatus_F_contig12358.2007.1|Name=mRNA_H-canaliculatus_F_contig12358.2007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3216bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12358:437..3652+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12358:437..3652+ >mRNA_H-canaliculatus_F_contig12358.2007.1 ID=mRNA_H-canaliculatus_F_contig12358.2007.1|Name=mRNA_H-canaliculatus_F_contig12358.2007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1080bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12358:437..3652+ (Hapterophycus canaliculatus Oshoro5f female)back to top |