prot_H-canaliculatus_F_contig12350.2005.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12350.2005.1
Unique Nameprot_H-canaliculatus_F_contig12350.2005.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length115
Homology
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 2.230e-61
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0
Query:   12 LPTYNTTGTQPPRFGKHDKALLATRGAKQPKGKHPGYIITLYGKKVRRCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVEFDRKAKLVISQLS 115
            LPTY+TTGTQPPRFGK DKALLAT GAKQPKGKHPGYIITLYGKKVRRCG C PC S DCGQCRYC DMPKHGGRGSYKQPCEARKC WVEFDRKAK VI+QLS
Sbjct:  440 LPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLS 543          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: A0A6H5JMT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT6_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 4.120e-22
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0
Query:   12 LPTYNTTGTQPPRFGKHDKALLATRGAKQPKGKHPGYIITLYGKKVR 58
            LPTY+TTGTQPPRFGK DKALLAT GAKQPKGKHPGYIITLYGKKVR
Sbjct:  207 LPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 253          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: A0A8K0DB43_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DB43_9COLE)

HSP 1 Score: 66.6 bits (161), Expect = 1.970e-10
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   54 GKKVRRCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVEF 103
            G + +RCGVC PC + DCG+C +C DM K GG G  KQ C+ R+C ++E 
Sbjct:  329 GPRRKRCGVCEPCQTPDCGKCNHCRDMLKFGGTGRSKQACQMRRCPYMEI 378          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: A0A553P9S0_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P9S0_TIGCA)

HSP 1 Score: 61.2 bits (147), Expect = 1.520e-8
Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   30 KALLATRGAKQPKGKHPGYIITLYGKKVR-RCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKC 98
            K +  +  +++ K K    I    GKK R  C +C  C+S DCG C YC DMP+ GG G  + PC+ R+C
Sbjct:  475 KPVAKSSNSRKEKTKDVFIIKKEKGKKDRVPCKICQACISPDCGMCSYCSDMPRFGGPGRMRHPCQMRQC 544          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: A0A7S2WD19_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD19_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.640e-8
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0
Query:   55 KKVRRCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVE 102
            ++  RCG C  C + +CG CR+C DMP  GG G+ KQ CE R+C  V+
Sbjct:   78 RRSNRCGECAGCRAQNCGDCRFCLDMPIFGGPGNLKQGCERRQCMAVQ 125          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: K0RWQ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWQ5_THAOC)

HSP 1 Score: 56.2 bits (134), Expect = 8.830e-7
Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0
Query:   55 KKVRRCGVCLPCLST-DCGQCRYCEDMPKHGGRGSYKQPCEARKCDWVEFDRKA 107
            K++ +CG C  C  T DCGQC++C D PK GG+   +Q C  RKC ++ + + A
Sbjct:  741 KRMFKCGDCTACKITFDCGQCQFCLDKPKFGGKNRLRQTCIKRKCPFMRYAKPA 794          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: A0A5N5TF23_9CRUS (CXXC-type zinc finger protein 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TF23_9CRUS)

HSP 1 Score: 56.2 bits (134), Expect = 8.890e-7
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 0
Query:   27 KHDKALLATRGAKQPKGKHPGYIITLYGKKVRR---CGVCLPCLSTD-CGQCRYCEDMPKHGGRGSYKQPCEARKC 98
            KH K  L+ + AK    K       +   KVR    CG C  CL+T  CG C YCEDMPK GG G Y+Q C  + C
Sbjct: 1362 KHHKLKLSKKAAK----KLNQSFCRVSPSKVRTKYYCGECPGCLTTTPCGNCLYCEDMPKFGGPGRYRQKCVKQLC 1433          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: R1G1Q6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G1Q6_EMIHU)

HSP 1 Score: 55.5 bits (132), Expect = 1.610e-6
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   55 KKVRRCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKC 98
            KK  RCG C  C++ +C   R+C DMPK GG G+ +QPC  R+C
Sbjct:  498 KKKMRCGECEACVAPNCXXXRFCLDMPKFGGVGTLRQPCLQRRC 541          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: UPI001FB83D82 (uncharacterized protein LOC125027167 isoform X1 n=11 Tax=Penaeus TaxID=133894 RepID=UPI001FB83D82)

HSP 1 Score: 53.9 bits (128), Expect = 5.670e-6
Identity = 23/40 (57.50%), Postives = 26/40 (65.00%), Query Frame = 0
Query:   60 CGVCLPCLSTD-CGQCRYCEDMPKHGGRGSYKQPCEARKC 98
            CG C  CL+T  CG C YCEDMPK GG G Y+Q C  + C
Sbjct: 1129 CGECPGCLTTTPCGNCLYCEDMPKFGGPGRYRQKCVKQLC 1168          
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Match: UPI0015D0BA8D (methyl-CpG-binding domain protein 1a isoform X1 n=3 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015D0BA8D)

HSP 1 Score: 52.0 bits (123), Expect = 2.600e-5
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 0
Query:   58 RRCGVCLPCLS-TDCGQCRYCEDMPKHGGRGSYKQPCEARKCDW 100
            R CG C  CL   DCG+C +C D PK GGR   +Q C  R+C +
Sbjct:  451 RMCGQCKACLQDNDCGECDFCMDKPKFGGRNKKRQKCRMRQCQF 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12350.2005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LN86_ECTSI2.230e-6189.42Similar to DNA (Cytosine-5-)-methyltransferase (Pa... [more]
A0A6H5JMT6_9PHAE4.120e-2293.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K0DB43_9COLE1.970e-1050.00Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A553P9S0_TIGCA1.520e-840.00Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A7S2WD19_9STRA4.640e-847.92Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K0RWQ5_THAOC8.830e-742.59Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A5N5TF23_9CRUS8.890e-743.42CXXC-type zinc finger protein 1 n=1 Tax=Armadillid... [more]
R1G1Q6_EMIHU1.610e-650.00Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
UPI001FB83D825.670e-657.50uncharacterized protein LOC125027167 isoform X1 n=... [more]
UPI0015D0BA8D2.600e-547.73methyl-CpG-binding domain protein 1a isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 55..98
e-value: 6.3E-13
score: 48.5
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 52..99
score: 11.954

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12350contigH-canaliculatus_F_contig12350:939..3284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12350.2005.1mRNA_H-canaliculatus_F_contig12350.2005.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12350 939..3284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12350.2005.1 ID=prot_H-canaliculatus_F_contig12350.2005.1|Name=mRNA_H-canaliculatus_F_contig12350.2005.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=115bp
GSGGGSASSVSLPTYNTTGTQPPRFGKHDKALLATRGAKQPKGKHPGYII
TLYGKKVRRCGVCLPCLSTDCGQCRYCEDMPKHGGRGSYKQPCEARKCDW
VEFDRKAKLVISQLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002857Znf_CXXC