mRNA_H-canaliculatus_F_contig12349.2003.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: D7FLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX1_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.740e-80 Identity = 120/130 (92.31%), Postives = 124/130 (95.38%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYDSADGDMGGRAMKFTSEEVDQV 390
MDDLKYALGFVC+FSF AAVG GAAIGGNVGASFTYFFALLPIVFL IGSTAPG+ITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTT VEFYDSA+GDM GRAMKFT EEVDQ+
Sbjct: 1 MDDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTLVEFYDSAEGDMSGRAMKFTPEEVDQL 130
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A835ZE95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE95_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.850e-46 Identity = 75/130 (57.69%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYDSADGDMGGRAMKFTSEEVDQV 390
+DDLKYALG V FS ++AV SG +GGN GAS TY FA++PI+FL IGS++PGII A IN + + +++ RRV HEAAHFL+GYLCGLPIKSY DG TTQ+EF+D+A+GD + T E+D V
Sbjct: 3 LDDLKYALGAVVAFSAISAVASGVIVGGNTGASLTYLFAIIPILFLGIGSSSPGIIVAAINLFKIRFDSEFQSRRVHHEAAHFLAGYLCGLPIKSYTVDGATTQIEFFDTAEGDQAVIGRQLTRPEIDPV 132
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S2V1Y0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y0_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.000e-39 Identity = 73/129 (56.59%), Postives = 96/129 (74.42%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYDSADGD--MGGRAMKFTSEEV 381
+DDLK+++ +V + SF AV SG IGGNVGA+ TY FA++PI+FL +GSTAPG+I+A I+ V+ ++ ++ERRVRHEAAHFL GYL G PIKSYKA G T +VEFYDS DGD + + T E+V
Sbjct: 167 LDDLKFSILYVTMGSFALAVLSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGLISAGIDAVKSRADPTFDERRVRHEAAHFLVGYLLGYPIKSYKASGSTNEVEFYDSVDGDDYIANPGAQLTKEQV 295
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S3UVY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVY9_HETAK) HSP 1 Score: 138 bits (347), Expect = 1.180e-36 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 4 DDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYDSADGD 342
DDL+++L VC+ SF+ A GSG IGGNVGA+ TY FA++PI+FL +GSTAPGIIT+ I + + D+ ERR+RHEAAHFL GY G PI+SY ++G +VEFYD+ GD
Sbjct: 182 DDLRWSLVVVCLGSFILAAGSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGIITSAIEGFKTNTDSDFNERRIRHEAAHFLVGYALGFPIRSYTSEGPACEVEFYDTPAGD 294
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S2C0S6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0S6_9STRA) HSP 1 Score: 126 bits (316), Expect = 7.280e-33 Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYDSADG 339
+D+LK AL V FS + AV SG +GGN GA+ TY FA+LPI+FL +GSTAPG+I+AVI + + Y ERR++HEAAHFL GYLCG+PI+ Y DG +V YD+ G
Sbjct: 86 LDELKAALFAVTAFSSIMAVLSGVVVGGNAGATLTYLFAVLPIIFLGVGSTAPGLISAVIEVGKTRLDPKYGERRIKHEAAHFLMGYLCGVPIQGYDVDGALPEVTLYDTRKG 198
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S3V807_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V807_9STRA) HSP 1 Score: 115 bits (288), Expect = 5.150e-28 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDD--YEERRVRHEAAHFLSGYLCGLPIKSYKA-DGGTTQVEFYDSADGDMGGRAMK 363
++D KYA +V S VA + S A + N GA+F Y FAL+PI+FLA+GS+APGII I + D E+R RHEA HFL GYLCGLPIKSY+A D G VEFY + DG+ GR ++
Sbjct: 192 LEDFKYATLWVTGGSTVAGIASLALLPENTGATFCYIFALIPILFLAVGSSAPGIIAGAIKGFKENKDDKAAQEDRICRHEAGHFLCGYLCGLPIKSYQANDSGIPCVEFYPTTDGNFAGRELE 315
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S4HX10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HX10_9STRA) HSP 1 Score: 108 bits (271), Expect = 7.020e-27 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYE--ERRVRHEAAHFLSGYLCGLPIKSYK-ADGGTTQVEFYDSADGDMGGRAMKFTSEEV 381
+DD K A V + S VAA+ S A + NVGA+ Y FAL+P+ F+ IGSTAPGII I++ + S D + +R RHEA HFL GYLCGLP+K Y D G VEF+ SA+G+ GR +FTSEE+
Sbjct: 74 LDDFKDATIAVTLGSTVAAIASLALLPENVGATLCYLFALIPVGFIGIGSTAPGIIAGAISSFQGTSDDQAQRDDRICRHEAGHFLCGYLCGLPVKQYSIVDTGFPCVEFHPSAEGEALGR--EFTSEEI 201
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7S4MBA1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBA1_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.310e-25 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYE--ERRVRHEAAHFLSGYLCGLPIKSYK-ADGGTTQVEFYDSADGDMGGRAMKFTSEEV 381
+DD K A V + S VAA+ S A + NVGA+ Y FAL+P+ F+ IGSTAPGII I++ + S D + +R RHEA HFL GYLCGLP+K Y D G VEF+ SA+G+ GR +FTSEE+
Sbjct: 186 LDDFKDATIAVTLGSTVAAIASLALLPENVGATLCYLFALIPVGFIGIGSTAPGIIAGAISSFQGTSDDQAQRDDRICRHEAGHFLCGYLCGLPVKQYSIVDTGFPCVEFHPSAEGEALGR--EFTSEEI 313
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: A0A7R9VLF5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLF5_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.590e-24 Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 1 MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDY--EERRVRHEAAHFLSGYLCGLPIKSYK-ADGGTTQVEFYDSADGDMGGRAMKFTSEEV 381
+DD K A V + S + A+ + A + N+GA+ Y AL+P+ F+AIGSTAP II I + + + D E+R RHEA HFL GYLCGLP+K+Y D G VEF+ SA+G+ GR +FTSEE+
Sbjct: 34 LDDFKDATIAVTLGSTILAIAALAVLPENIGATVCYLIALVPVGFIAIGSTAPSIIAGAIASFQGTADDQTQREDRICRHEAGHFLCGYLCGLPVKAYSIGDTGFPCVEFHPSAEGEASGR--EFTSEEI 161
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Match: F0YGW1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW1_AURAN) HSP 1 Score: 105 bits (263), Expect = 5.940e-24 Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 4 DDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSTAPGIITAVINNVRRKSQDDYEERRVRHEAAHFLSGYLCGLPIKSYKADGGTTQVEFYD 327
D+L FV V S + AVGSGA IGGN+GA+FTY FA+LPI+FL +GS++PG+I AV ++++++ RR RHEAAH ++GY GLP+ +Y D VEFYD
Sbjct: 848 DELLQITAFVFVTSAILAVGSGALIGGNLGAAFTYIFAVLPIIFLGVGSSSPGVILAVYG-ATKQAKENTAPRRRRHEAAHLVAGYALGLPVAAYADDA----VEFYD 950 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12349.2003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12349.2003.1 >prot_H-canaliculatus_F_contig12349.2003.1 ID=prot_H-canaliculatus_F_contig12349.2003.1|Name=mRNA_H-canaliculatus_F_contig12349.2003.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=130bp MDDLKYALGFVCVFSFVAAVGSGAAIGGNVGASFTYFFALLPIVFLAIGSback to top mRNA from alignment at H-canaliculatus_F_contig12349:174..2437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12349.2003.1 ID=mRNA_H-canaliculatus_F_contig12349.2003.1|Name=mRNA_H-canaliculatus_F_contig12349.2003.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2264bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12349:174..2437+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12349:174..2437+ >mRNA_H-canaliculatus_F_contig12349.2003.1 ID=mRNA_H-canaliculatus_F_contig12349.2003.1|Name=mRNA_H-canaliculatus_F_contig12349.2003.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=780bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12349:174..2437+ (Hapterophycus canaliculatus Oshoro5f female)back to top |