mRNA_H-canaliculatus_F_contig10171.199.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10171.199.1
Unique NamemRNA_H-canaliculatus_F_contig10171.199.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 1.720e-116
Identity = 205/409 (50.12%), Postives = 274/409 (66.99%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISLLAVQELR 1229
            CA CA+ Y+ G   YTCS+C   RR  T A  +V+L +A  + V   + Y+ + +E++     AA R  + +R R  RS  +Q  KII+VSWQI++QF SVASVTYP LY +F+ +ID ++LD+AW LS  C + T+FY +LL  TIGP+ V+ LVL S     R C A D +R S   +RHA  I+ ISFLVYS+ S+ +FQTF CDD+D G SFLRVD+ +QC T +H+G+M YAG M +VYP GIP  Y   L+ AR   KS ++A+     VL+ LW+PY++  YYYEVVECFRRV LSGLV+F+LPNTAGQ+ T FLLS+ FF +F +LDPY HR  TWL  IGHA VM+S+F  +  KVDV  DD FSQ+VF+  L+ A+  + + +  EA W+    VQE+R
Sbjct:  621 CAECAEDYSLGP-GYTCSECDEDRRKWTTAA-AVILXVAAAVAVTVSVGYLGAPTEES-----AAARIPSLVRERFGRSWVSQGFKIIIVSWQIVSQFASVASVTYPDLYATFVGFIDFLDLDVAWTLSVDCWVGTNFYVTLLTMTIGPVVVSVLVLGSWWIRTRHCPADDPDRFSRINQRHAKFIYLISFLVYSSVSSTVFQTFPCDDIDTGESFLRVDYRIQCSTAEHRGYMVYAGFMCLVYPIGIPVAYLFFLYKARKGFKSEEEAMRTDIAVLRPLWQPYRQSVYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAANVVLALIVAVEALWMCSDVVQEIR 1022          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 5.350e-88
Identity = 176/410 (42.93%), Postives = 243/410 (59.27%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLI-DTDFYDSLLVSTIGPLAVAG-LVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEI------KSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISL 1208
            C+VC  G+    + +TC++C+S RR   +AV  +  L+AV  +V   I      +E   G  G   R       R+ R+   QTLKII+V WQI+TQF  VA++TYP+ YQ FL+ IDVVN DL   L+AGCL  D DF+D LL+ T+GPL   G LV+  R A  R   A  Q        +H SA+  ++FL+YS+ S+ +FQTFAC+ LDDG  +LRVD+++ C   KHK F  YAG+M +VYP GIP  YA+ L   R+ +      K+  Q +AG       LWEPY+   +YYEV+EC RR++L+G+V F+ PN A QIA + L++ FF +VF ++ PY   S TWL   GH  V LSMF  LL KVDV  +   SQ+VF+ V +  H  + + ++ E   I L
Sbjct:  642 CSVCETGFAPS-LAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVT--IFKYLLSTEVDEGNAGCFHR-------RILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAG-------LWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGICL 1034          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.650e-84
Identity = 172/399 (43.11%), Postives = 246/399 (61.65%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVV--LKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEA 1193
            C +C+DGYT+  + + CSKC+          V+VVL L +V +  A + YV      TSGE G  R+G   I   + R    Q+LKI++VSWQI+TQFTSVA+VTYP +YQ  L  +DV N DL+W+LSAGC++D +F+  LLVSTI P+ VA L+L    A   R    + E+ +    +H + +  ++F VYS+ S+ +F+ FACDDLD    +LR D+S++C + +H+G   YAG M ++Y  GIP  YA  L  +R+ +K           V  + +LWEPY+   +YYEV+ECFRRV+L+G+VVF+ PNTA QIA + L++  F ++   L PY  R  TW+  +GH  V LSM+  LL KVDV  + + SQEVF  VL+  H  M +F++ EA
Sbjct: 1099 CGICSDGYTEQ-LSFACSKCSENSAGGI--AVAVVLALLIVFLAVAVVSYV------TSGEVGMGRKG--GIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPI-VALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 4.640e-84
Identity = 168/401 (41.90%), Postives = 238/401 (59.35%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLID-TDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202
            CAVC DGY+   + +TC++C+  RR   +       L+AV   VA     + +E E+         R +     +  ++   Q+ KII+V WQI+TQF + A+VTYPR+YQ FL+ IDV+N+DL  M+SAGCL    DF+D LLVSTI PL   G++  +    LRR   +          +H + + +++FLVYS+ S+++FQTFACD LDDG ++LR D+ + C T KH     YAGVM +VYP GIP  YA+ L   R+ + +     AG+  +   LWE Y+   +YYEV+EC RR++L+G+VVF+ PN A QIA + L+++FFF VF IL PY      WL   G   V LSMF  LL KVDV  + S SQ+ ++ VL+  H  MF+ + AE   I
Sbjct:  624 CAVCGDGYSPS-LAHTCTRCSRSRRQGLMVATVFAALIAVCATVATFRYLLSTEFEE---------RNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAGAQPIAS-LWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDVSHERSQSQQAYAGVLVAGHVLMFLAISAEVVGI 1013          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.920e-83
Identity = 177/404 (43.81%), Postives = 244/404 (60.40%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCL-IDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQAS-DQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLK--DLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202
            CAVC   Y+   + +TC  C+S RR   + V++ + ++  VL  AA   Y+ S +E   G  G  RR       R+  +   ++LKII+V WQI+TQF   A+VT+P LYQ FL+ IDV+N D+  +L+AGCL  D DF+D LLV+TIGPL VAG + ++    +RR  AS D         +H +A+ +++F+VYS+ S+ +FQTFAC+ LDD   +LR D+ + C   KHK F  YA +M +VYP GIP  YAL L   R+ +     A A  TV L    LWEPY+   +YYEVVEC RRV+L+G+VVF+ PN A QIA + L++ FF ++F IL PY   S  WL   GH  V LSMF  LL KVDV G+ + SQ +FS V +  H  M + ++ E   I
Sbjct: 1227 CAVCETDYSSS-LAHTCKHCSSSRRRG-LTVIAAIAVIVTVLAFAAVFQYMLS-TEHEEGIFGCFRR-------RVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLAD---AGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVEVVGI 1617          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 1.090e-82
Identity = 169/418 (40.43%), Postives = 254/418 (60.77%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLS----RAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKS--GQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWISL-LAVQELRAP 1235
            CAVC+DGYT   + + C++C+ G     +A V  V++L V   VA+  M         SG  G  R G+    +RL +    Q++KI++V+WQI+TQFTSVA+VTYP +Y+ FL  +DV N DL+W+LSAGC+ D DF+D LL ST+ P  V GL+ L+     A ++ R +A   +       +H S +  ++FL+YS+ SA +F+ F C++L+DGT++LR D+++ C + KHK F  YAG M +VY  GIP  YA  L   R+ +K     +     T    DLW+PY+   +YYEV+EC RRV+L+G+VVF+ PNTA QIA + +++  F +V   L P+  +   WL   GH  V +SM+  LL KVDV G+ + SQ V+ +VL+ AH  M + ++ E F ++  L V++ + P
Sbjct:  845 CAVCSDGYTTE-LAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAM---------SGRVGDVRSGVV---ARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSP--VIGLLFLAGTYAAAVSMNRGKAESLQ---VIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEP 1244          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.580e-82
Identity = 172/429 (40.09%), Postives = 251/429 (58.51%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNER---RHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVV--LKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI---SLLAVQELRAPRQSGGRVGSR 1265
            CA+C+D Y+   + +TCSKC +      +A    V+ L  V+ V   + YV    +  +G           +   LKR    QTLKI++V+WQI+TQFTS A+VTYP +YQ FL  +DV N D++W+LSAGC++D DF+D LL+STIGP+    + LL  AAT R     ++   +T +    RH S +  + FLVYS  S+++FQTFACD L+ G  +LR D+ ++C + KH+GF  YAG M ++YP GIP  Y   L   R+ ++           V  + +LW+PY+   YYYEV+EC RR++L+GLVVF+ PNTA QIA + ++++ F V+   L PY     TW+  + HA V +S++  LL KVDV  +   SQ+VF  VL+ AH  M + ++ E   +   S +  Q+  APR  G  V  R
Sbjct:  606 CAICSDDYS-AQLGFTCSKCPNRAGGILLATALAVIGLFTVVAV---VSYVAWRVDPNTG---------CAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPI----MALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMR 1017          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.100e-81
Identity = 166/403 (41.19%), Postives = 241/403 (59.80%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATI---AVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202
            CAVC+ GY+ G  R TC  C    + + +   A +  + L AVV +V+  +  V+    Q  G  G  RR  +  ++R++++     +KI++V WQI+TQ++ VA V YP  YQ FL+ +DVVNLDL ++LS  C+ DT+FYD LL++TIGP+ V GL+  +     RR +  ++  R   +RRH S   ++ F++Y+  S  IF+TF CD LDDG S+LR D+S+ C TP H  +  YAG+  +VYP GIP  +   L   R+E+K   +          DLWEPY+  AYYYEVVECFRR+ L+G  VF+ P+++ Q+A   LL+  F VV  IL P+      WL   GH  V  SM+  LL +VDV  +   SQEVFS V+++AH AMF+ ++A+   I
Sbjct:  635 CAVCSAGYSPGYSR-TCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGW-RRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDV-QRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLI 1034          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.750e-81
Identity = 169/404 (41.83%), Postives = 237/404 (58.66%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVVLLLAVVLVVAARIMYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCL-IDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNER-RHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLK--DLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202
            CAVC   Y+   + + C+ C+S RR   + + ++ +++ V+  VA     + +E E+           L   R R+  +   Q+LKII+V WQI+TQF   A+VTYP LYQ FL+ IDV+N D+  +L+ GCL  + DF+D LLV+TIGPL VAG + ++    LRR  AS         R +H +A+ +++FLVYS+ S+ +FQTFAC+ LDD   +LR D+ + C   KHK F  YA +M +VYP GIP  YA  L    + +     A A  TV L    LWEPY+   +YYE VEC RRV L+G+VVF+ PN A QIA + L++ +F ++F IL PY   S  WL   GH  V LS+F  +L KVDV G+   SQ VFS VL+  H  M + ++ E   I
Sbjct:  316 CAVCKTDYSPS-LAHICTHCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLSTEHEEGI---------LWCFRRRVLGAVPVQSLKIIVVVWQILTQFADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILAD---AGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVEVVGI 706          
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 6.700e-81
Identity = 165/408 (40.44%), Postives = 242/408 (59.31%), Query Frame = 3
Query:    3 CAVCADGYTKGGVRYTCSKCTSGRRDATIAVVSVV--LLLAVVLVVAARIMYV------QSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQFTSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIGPLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTSAIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGIPFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFRRVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMIGHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAFWI 1202
            CAVCA GY+ G  R TC  C    + + +   + +  L LA V+V+ +R++ V      Q       G  G  RR  + +++R++++     +KI++V WQI+TQ++ VA + YP  YQ FL+ +DVVNLDL ++LS  C+ DT+FYD LL++TIGP+ V GL+  +     RR +  ++  R   +RRH S   ++ F++Y+  S  IF+TF CD LDDG S+LR D+S+ C TP H  +  YAG+  +VYP GIP  +   L   R+E+K   +          DLWEPY+  AYYYEVVECFRR+ L+G  VF+ P+++ Q+A   LL+  F VV  IL P+      WL   GH  V  SM+  LL +VDV  +   SQEVFS V+++AH AMF+ ++ +   I
Sbjct:  611 CAVCAAGYSPGYSR-TCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGW-RRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDV-QRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLI 1015          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10171.199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNY1_ECTSI1.720e-11650.12Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5J7J9_9PHAE5.350e-8842.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0E9_9PHAE1.650e-8443.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FM10_ECTSI4.640e-8441.90Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7G3S0_ECTSI1.920e-8343.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI1.090e-8240.43Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI1.580e-8240.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTT9_ECTSI1.100e-8141.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAD4_9PHAE1.750e-8141.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L324_9PHAE6.700e-8140.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10171contigH-canaliculatus_F_contig10171:2415..4739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue2.7e-96
Seed eggNOG ortholog2880.D8LNY1
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size2009
Cds size1125
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10171.199.1prot_H-canaliculatus_F_contig10171.199.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10171 3153..4593 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928646.664432-UTR-H-canaliculatus_F_contig10171:2414..31521622928646.664432-UTR-H-canaliculatus_F_contig10171:2414..3152Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10171 2415..3152 -
1696845511.688139-UTR-H-canaliculatus_F_contig10171:2414..31521696845511.688139-UTR-H-canaliculatus_F_contig10171:2414..3152Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10171 2415..3152 -
1622928646.696506-UTR-H-canaliculatus_F_contig10171:4593..47391622928646.696506-UTR-H-canaliculatus_F_contig10171:4593..4739Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10171 4594..4739 -
1696845511.7227886-UTR-H-canaliculatus_F_contig10171:4593..47391696845511.7227886-UTR-H-canaliculatus_F_contig10171:4593..4739Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10171 4594..4739 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928646.6755364-CDS-H-canaliculatus_F_contig10171:3152..41301622928646.6755364-CDS-H-canaliculatus_F_contig10171:3152..4130Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10171 3153..4130 -
1696845511.7033215-CDS-H-canaliculatus_F_contig10171:3152..41301696845511.7033215-CDS-H-canaliculatus_F_contig10171:3152..4130Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10171 3153..4130 -
1622928646.684416-CDS-H-canaliculatus_F_contig10171:4446..45931622928646.684416-CDS-H-canaliculatus_F_contig10171:4446..4593Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10171 4447..4593 -
1696845511.7131774-CDS-H-canaliculatus_F_contig10171:4446..45931696845511.7131774-CDS-H-canaliculatus_F_contig10171:4446..4593Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10171 4447..4593 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10171.199.1

>prot_H-canaliculatus_F_contig10171.199.1 ID=prot_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=375bp
MYVQSESEQTSGEGGAARRGLARIRSRLKRSTGAQTLKIILVSWQIITQF
TSVASVTYPRLYQSFLAYIDVVNLDLAWMLSAGCLIDTDFYDSLLVSTIG
PLAVAGLVLLSRAATLRRCQASDQERRSTNERRHASAIFWISFLVYSTTS
AIIFQTFACDDLDDGTSFLRVDHSVQCYTPKHKGFMWYAGVMSIVYPFGI
PFCYALSLHGARNEIKSGQQAVAGSTVVLKDLWEPYQKRAYYYEVVECFR
RVVLSGLVVFVLPNTAGQIATSFLLSMFFFVVFMILDPYHHRSHTWLGMI
GHAAVMLSMFSGLLEKVDVDGDDSFSQEVFSVVLILAHGAMFMFLIAEAF
WISLLAVQELRAPRQSGGRVGSRR*
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mRNA from alignment at H-canaliculatus_F_contig10171:2415..4739-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10171.199.1 ID=mRNA_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10171:2415..4739- (Hapterophycus canaliculatus Oshoro5f female)
TTTGCGCCGTGTGTGCAGACGGCTACACCAAGGGTGGTGTAAGGTATACA TGCTCGAAGTGCACGAGCGGTCGCCGGGACGCTACGATTGCCGTCGTTTC GGTTGTGCTCCTTCTTGCCGTCGTACTGGTGGTGGCCGCCCGCATCATGT ACGTGCAATCGGAGTCCGAACAGACATCGGGCGAGGGAGGTGCTGCCAGG CGAGGGTTAGCAAGGATCAGGTCGCGTTTGAAACGCTCAACAGGGGCCCA GACACTCAAAATCATCTTGGTATCATGGCAAATCATCACTCAGGTAAGTA CGCTCTTTCTTTAGTAGGAAAGCACGTACCAGGTATATATTTTGTTTGAT AATTGTGCACGATAAATAGCGATTGTTGCATGGTACAAAGACGGAGCAGG TTGTTGAGTAGTAACAGGACGTTGGAAGGTTTCCGTCGCGATGCGGTTAG GTTGTTTGCGGCCGTTGTTTTCTACTACTGCTCCTATGGATTCAATTTCG GATGCCCAATGTTTATGCACGACCGTAAAGGTATAAATCCTCTTCATTTG CTTCACGCGTCCTGTTCCCCACCCTTGCATGTCGCATGTGTGGCTATTCC TTTGCTTAGTTTACCTCGGTGGCGAGTGTGACTTACCCAAGATTGTACCA GTCGTTCCTTGCATATATCGACGTGGTGAATCTGGATCTCGCATGGATGC TGTCTGCGGGATGTTTGATCGACACGGACTTTTACGACAGCTTGCTCGTC TCCACGATCGGGCCACTGGCAGTGGCGGGCCTGGTGCTGCTATCGCGCGC GGCCACGCTGCGCAGATGCCAGGCAAGCGACCAAGAGAGACGCTCTACAA ACGAGCGGCGACACGCGTCGGCCATATTCTGGATTTCTTTTCTAGTCTAC TCGACGACCTCGGCAATTATTTTTCAGACGTTTGCGTGCGACGATCTAGA CGATGGGACGTCTTTCCTTCGTGTGGATCACAGCGTACAGTGCTACACCC CGAAACACAAGGGGTTCATGTGGTATGCCGGTGTCATGAGCATTGTCTAC CCTTTCGGCATCCCGTTTTGTTACGCACTATCCCTCCACGGCGCTCGGAA TGAGATCAAATCTGGGCAGCAGGCAGTCGCGGGAAGTACGGTTGTGTTGA AAGACCTTTGGGAGCCGTACCAAAAGCGCGCGTACTATTACGAGGTCGTG GAGTGCTTTCGCCGAGTTGTGCTTTCCGGTCTAGTCGTCTTCGTGTTGCC TAACACGGCGGGCCAAATCGCCACGAGCTTCTTGCTCTCGATGTTCTTCT TCGTCGTGTTCATGATTCTTGATCCCTATCACCACCGTTCGCATACATGG TTGGGGATGATCGGCCACGCGGCCGTCATGTTGAGCATGTTTTCCGGGCT ACTGGAGAAGGTGGACGTTGACGGTGACGACAGTTTCAGCCAAGAGGTTT TCTCGGTGGTTCTCATCTTGGCGCACGGTGCGATGTTTATGTTCTTGATT GCAGAGGCGTTCTGGATATCTCTACTTGCTGTACAGGAACTTCGAGCCCC GCGGCAAAGCGGCGGCCGCGTGGGAAGCCGGCGCTAGCAAGAAAATATTA AGCGTGTATGTACCTAGGTCGAGCGACTTCCTTCCGGCAACCCTGTAATT TTTCGAACACTGAAGTGGATAGTTGGAGGAGCTGTACACATACTTCAGAA ACAGATATTATTCATAGGGTTGAAGTTTTTCTTGAGCTGCTTAGTTTTGG ACACACGTGGGTGTTTTTGTGGTAGCTTTGCCTCCTGAAGGTTCTGGACT TCATTTGTGGAAGAAGTTTAGTCCGGGGGGATCGGTTGTCGGTCGTTCTT CGACAAGACGGTGTTGTTTGACGAGATTCTTTTTTTTCTAGTGGGAGCCC ATTCTAACGGCGATGAATCGGCATTCGCCGTGCCTAGACCACTCGAACTC TGCTTTTGGTTCTGTCTTCCGAGCTCTTTCGAGTGTGAGACACGGCAAGT AGTGTGTCTTGCTGAGATGCGTCGATGGACGTGGACGTGGGATACATTTT TGGGGGTCAAAAGCTCAATTAACCCTCTCTACACAAGGCCGGTCGCCCCA GTGGTTTGGTGGGTACCTTCGTAGGTTCCTAGCAGGCAGGTCATGGGTAC GAGTCCCGGCGTTTGCGACGTTTTCTCACATTGTGAGTTTTTTCTCTCGC GTTCGTTCTTGCCAGTCAAGCACCGCAGAAGGTGGGGGCCTCAGGGAGAG GAACCTTCTGTGTTACCACGGTTCAGACGTTCTGGCAAAATGCCCACGTG CCAACATGTGCCCTCGTGAACTCTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10171:2415..4739-

>mRNA_H-canaliculatus_F_contig10171.199.1 ID=mRNA_H-canaliculatus_F_contig10171.199.1|Name=mRNA_H-canaliculatus_F_contig10171.199.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2250bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10171:2415..4739- (Hapterophycus canaliculatus Oshoro5f female)
ATGTACGTGCAATCGGAGTCCGAACAGACATCGGGCGAGGGAGGTGCTGC
CAGGCGAGGGTTAGCAAGGATCAGGTCGCGTTTGAAACGCTCAACAGGGG
CCCAGACACTCAAAATCATCTTGGTATCATGGCAAATCATCACTCAGATG
TACGTGCAATCGGAGTCCGAACAGACATCGGGCGAGGGAGGTGCTGCCAG
GCGAGGGTTAGCAAGGATCAGGTCGCGTTTGAAACGCTCAACAGGGGCCC
AGACACTCAAAATCATCTTGGTATCATGGCAAATCATCACTCAGTTTACC
TCGGTGGCGAGTGTGACTTACCCAAGATTGTACCAGTCGTTCCTTGCATA
TATCGACGTGGTGAATCTGGATCTCGCATGGATGCTGTCTGCGGGATGTT
TGATCGACACGGACTTTTACGACAGCTTGCTCGTCTCCACGATCGGGCCA
CTGGCAGTGGCGGGCCTGGTGCTGCTATCGCGCGCGGCCACGCTGCGCAG
ATGCCAGGCAAGCGACCAAGAGAGACGCTCTACAAACGAGCGGCGACACG
CGTCGGCCATATTCTGGATTTCTTTTCTAGTCTACTCGACGACCTCGGCA
ATTATTTTTCAGACGTTTGCGTGCGACGATCTAGACGATGGGACGTCTTT
CCTTCGTGTGGATCACAGCGTACAGTGCTACACCCCGAAACACAAGGGGT
TCATGTGGTATGCCGGTGTCATGAGCATTGTCTACCCTTTCGGCATCCCG
TTTTGTTACGCACTATCCCTCCACGGCGCTCGGAATGAGATCAAATCTGG
GCAGCAGGCAGTCGCGGGAAGTACGGTTGTGTTGAAAGACCTTTGGGAGC
CGTACCAAAAGCGCGCGTACTATTACGAGGTCGTGGAGTGCTTTCGCCGA
GTTGTGCTTTCCGGTCTAGTCGTCTTCGTGTTGCCTAACACGGCGGGCCA
AATCGCCACGAGCTTCTTGCTCTCGATGTTCTTCTTCGTCGTGTTCATGA
TTCTTGATCCCTATCACCACCGTTCGCATACATGGTTGGGGATGATCGGC
CACGCGGCCGTCATGTTGAGCATGTTTTCCGGGCTACTGGAGAAGGTGGA
CGTTGACGGTGACGACAGTTTCAGCCAAGAGGTTTTCTCGGTGGTTCTCA
TCTTGGCGCACGGTGCGATGTTTATGTTCTTGATTGCAGAGGCGTTCTGG
ATATCTCTACTTGCTGTACAGGAACTTCGAGCCCCGCGGCAAAGCGGCGG
CCGCGTGGGAAGCCGGCGCTAGTTTACCTCGGTGGCGAGTGTGACTTACC
CAAGATTGTACCAGTCGTTCCTTGCATATATCGACGTGGTGAATCTGGAT
CTCGCATGGATGCTGTCTGCGGGATGTTTGATCGACACGGACTTTTACGA
CAGCTTGCTCGTCTCCACGATCGGGCCACTGGCAGTGGCGGGCCTGGTGC
TGCTATCGCGCGCGGCCACGCTGCGCAGATGCCAGGCAAGCGACCAAGAG
AGACGCTCTACAAACGAGCGGCGACACGCGTCGGCCATATTCTGGATTTC
TTTTCTAGTCTACTCGACGACCTCGGCAATTATTTTTCAGACGTTTGCGT
GCGACGATCTAGACGATGGGACGTCTTTCCTTCGTGTGGATCACAGCGTA
CAGTGCTACACCCCGAAACACAAGGGGTTCATGTGGTATGCCGGTGTCAT
GAGCATTGTCTACCCTTTCGGCATCCCGTTTTGTTACGCACTATCCCTCC
ACGGCGCTCGGAATGAGATCAAATCTGGGCAGCAGGCAGTCGCGGGAAGT
ACGGTTGTGTTGAAAGACCTTTGGGAGCCGTACCAAAAGCGCGCGTACTA
TTACGAGGTCGTGGAGTGCTTTCGCCGAGTTGTGCTTTCCGGTCTAGTCG
TCTTCGTGTTGCCTAACACGGCGGGCCAAATCGCCACGAGCTTCTTGCTC
TCGATGTTCTTCTTCGTCGTGTTCATGATTCTTGATCCCTATCACCACCG
TTCGCATACATGGTTGGGGATGATCGGCCACGCGGCCGTCATGTTGAGCA
TGTTTTCCGGGCTACTGGAGAAGGTGGACGTTGACGGTGACGACAGTTTC
AGCCAAGAGGTTTTCTCGGTGGTTCTCATCTTGGCGCACGGTGCGATGTT
TATGTTCTTGATTGCAGAGGCGTTCTGGATATCTCTACTTGCTGTACAGG
AACTTCGAGCCCCGCGGCAAAGCGGCGGCCGCGTGGGAAGCCGGCGCTAG
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