mRNA_H-canaliculatus_F_contig1231.1980.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1231.1980.1 vs. uniprot
Match: A0A6H5L0B2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B2_9PHAE) HSP 1 Score: 852 bits (2200), Expect = 1.830e-288 Identity = 450/716 (62.85%), Postives = 547/716 (76.40%), Query Frame = 1
Query: 421 LLPLAALLPLLLARTASAFDEGLPDDLRVVHANVIMRHGERSRLAKSTAMEFGDNAGVMLTDLGELQCFSVGEQLRERYFPSDSTPEGTTTTIDGLTLWYDHDRVEVVSSGYDRTLESAAALNLGLYPEGQQDPDVQKNVALWNDQIVVPVHSSLPENDIEILAFNKCPVYDDNWVEAYQETDFQELQAVASEPYPDGTDGFITQVYEAFDDFRKANGVPDCWDEASALYEDLLELHAPYNLWDCARTLLAVDETQTVDFINSATIPPGMADQNDDITNGWTYLEYLVHWVEDFKYRQSVVGRMIGGPYLTAMNLRMSQVVSHVRNGGEDTVGRFPGMHITSGHYGTLKGIAGALDIDAVDGIPEYASHFSFELLYNATAKYTEGEEDFAVRIMYQEGTSKANLTFVNMGIVYDGEESISNLDEELSSARDTETGIMGWNQWTYLMDHQVSGKPAVYSEGDEEWCMDCLATQPNSCISLELKLMTQKWEEADVAVQDAIDDKEAVDDGIGG---IHVALLSLFGLIMGIGCGLCLKPWVDRHNKKI--KSTSGSIAGESGLEAWSSSGANSNNGSFRLGAKSTSNRGRHVVGAVDARQMMAVPTTDNGSPDAP-RMNGSA----TNGGGHSDDYDVEDDAGGARIPEFAPTSALGEPVPFPHRRQPSGMVTGVDSSMMSGIDAEDDADEDVMGGAGSSPAGSAETGSSTATASTQR 2538
L +AAL+ +LA A D G+P D RVVH +V+MRHGER+RL K T EFGD+ GV+LT++GE QC+ +G+QLRERY P+ ++ E TTTI+GLTLWYD DRV++ SSGYDRTLESAAA+ LGLYP GQ D DV++N LW +QIVVP+HSS P+ND I A++KCPVY+ NW+++Y++ +FQELQ VASE DG+DGFITQVY FD+FR AN PDCWDE AL D LELHAPYNLWDCARTLLA + QTV+FIN+ATIP ++Q DI +GW YL +LV VED KY Q VVGR G YLT MNLRMSQV+ HVR+G VGRFPGMHITSGHYGTLKGIAGALDIDA+DGIPEYASHF+FELLYN +A + GEEDFA+RIMYQ+G+S ++L F MG VYDG SIS+ DEELS+ RD +TGIMGW QW YLMD+Q +GKP VY E EEWC+DCLAT P++CI+ EL+LMTQ+WEEA V + A D + DDGIGG +HVALLS+FG+++GIG G+C+KP +DRHNK + KS + +I+G+ GLEAWSS+ ANSNNGSFRLGAK TS R V +MMAVP+ + D+ RM+G A TNG G S YD+E+D+ IPEFAPTSALGEPVPFPH+RQ SGMV+GVDSSMMSGIDA+D D+DV GG G+S G A GSS TA+T +
Sbjct: 58 LAAVAALVVAMLAGEVGAADAGIPSDYRVVHTHVVMRHGERTRLRKDTETEFGDSDGVVLTNVGEEQCYDLGKQLRERYLPASNSAE-YTTTIEGLTLWYDADRVQIESSGYDRTLESAAAMALGLYPMGQNDTDVEQNSLLWMEQIVVPIHSSKPQNDPYITAYDKCPVYNANWIQSYEKDEFQELQRVASEEQEDGSDGFITQVYNIFDEFRGANDNPDCWDEVIALKLDQLELHAPYNLWDCARTLLAAGKDQTVNFINAATIPTDFSEQYPDIIDGWLYLGWLVDEVEDMKYEQDVVGRYAAGLYLTEMNLRMSQVIEHVRSGYMSNVGRFPGMHITSGHYGTLKGIAGALDIDAIDGIPEYASHFAFELLYNGSANHRAGEEDFAIRIMYQDGSSTSDLNFAVMGQVYDGSGSISDFDEELSTLRDYDTGIMGWTQWDYLMDYQNAGKPVVY-ESVEEWCLDCLATAPDTCIAQELELMTQQWEEASVQAEQATADYKEADDGIGGKYCVHVALLSIFGVVLGIGIGICIKPCLDRHNKMLNQKSQASTISGDRGLEAWSSA-ANSNNGSFRLGAKHTSTR------QVGGNRMMAVPSAPDDDMDSSGRMDGGANGAYTNGNG-SGQYDIEEDSTPG-IPEFAPTSALGEPVPFPHKRQASGMVSGVDSSMMSGIDADDVDDDDVAGG-GTSRQGKA--GSSDVTATTTK 759
BLAST of mRNA_H-canaliculatus_F_contig1231.1980.1 vs. uniprot
Match: A0A1Y1HLN0_KLENI (Acid phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLN0_KLENI) HSP 1 Score: 87.4 bits (215), Expect = 5.210e-14 Identity = 109/466 (23.39%), Postives = 183/466 (39.27%), Query Frame = 1
Query: 514 ANVIMRHGERSRLAKS-TAMEFGDNAGVMLTDLGELQCFSVGEQLRERYFPSDSTPEGTTTTIDGLTLW-YDHDRVEVVSSGYDRTLESAAALNLGLYPEGQQDPDVQKNVALWNDQIVVPVHSSLPENDIEILAFNKCPVYDDNWVEAYQETDFQELQAVASEPYPDGTDGFITQVYEAFDDFRKANGVPDCWDEASALYEDLLELHAPYNLWDCARTLLAVDETQTVDFINSATIPPGMADQNDDITNGWTYLEYLVHWVEDFKYRQSVVGRMIGGPYLTAMNLRMSQVVSHVRNGGEDTVGRFPGMHITSGHYGTLKGIAGALDIDAV-----DGIPEYASHFSFELLYNATAKYTEGEE-------DFAVRIMYQEGTSKANLTFVNMGIVYDGEESISNLDEELSSARDTETGIMGWNQWTYLMDHQVSGKP-AVYSEGDEEWCMDCLATQPNSCISLELK 1866
A I RHG R+ L K+ T + G G +LT GE Q F VG+ R RY + +T + T T ++GL YD V +SSG+DRTL SAA G +P D + +P+ S +D I A++ CP++ + +Q +F + AS+P +T + + K N + +D+ + + +L +++P A Q W+ + L +W+E +YR+S+ G ++GG L + +R+ + + E + S HY T AL++ A IP YA+ EL N +E +AVR++ Q+G + L A T + G + L D +P A+ ++G +WC C C++++ +
Sbjct: 12 AMTIHRHGARTVLYKNATTLAEG---GALLTTQGENQTFGVGQGFRNRYL-NPTTCQVTQTCVNGLAGGRYDGTNVRSISSGFDRTLASAAGWLQGAFPANATDTPLPAKT--------IPIFSIPIADDFLIRAYDNCPLFLATMNQWFQSAEFAAKEN-ASQP-------LLTSLQSSLGSVPKLNNFWNVFDDLNTQRDAILT--------------------------GQSSVPLTSAMQEPT----WSQVVDLANWLEANRYRRSLTGNLLGGTLLNEILVRLQARRINSQPEAERIIEY-------SAHYPTQLSFLSALNLPANATLFNTKIPTYAAQILIELHSNRPPAISESPPGLPLSGYSWAVRMLTQDGVDTPYVPI------------------SLPCAGSTAEQLAGEGACS-LDDFLAFAQPNAISTQG--KWCQVCANVVMKGCVAIQFQ 399 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1231.1980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1231.1980.1 >prot_H-canaliculatus_F_contig1231.1980.1 ID=prot_H-canaliculatus_F_contig1231.1980.1|Name=mRNA_H-canaliculatus_F_contig1231.1980.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=789bp MVVRTKAAGGSEKGGNMAAGMHGACRSRGALRQQPASGGRGAPTLPRRSDback to top mRNA from alignment at H-canaliculatus_F_contig1231:2095..23271- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1231.1980.1 ID=mRNA_H-canaliculatus_F_contig1231.1980.1|Name=mRNA_H-canaliculatus_F_contig1231.1980.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=21177bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1231:2095..23271- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1231:2095..23271- >mRNA_H-canaliculatus_F_contig1231.1980.1 ID=mRNA_H-canaliculatus_F_contig1231.1980.1|Name=mRNA_H-canaliculatus_F_contig1231.1980.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4734bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1231:2095..23271- (Hapterophycus canaliculatus Oshoro5f female)back to top |