prot_H-canaliculatus_F_contig12308.1978.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12308.1978.1
Unique Nameprot_H-canaliculatus_F_contig12308.1978.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length64
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12308.1978.1 vs. uniprot
Match: D8LDN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.110e-9
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   28 HEGYAFTGCGAHVDYTLDLGSGAGYERVWCYV 59
            ++GY+FTGCGAHVDYTL+   G GYER WCYV
Sbjct:   23 YQGYSFTGCGAHVDYTLNTFEGGGYERTWCYV 54
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12308.1978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDN9_ECTSI2.110e-971.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12308contigH-canaliculatus_F_contig12308:335..2008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12308.1978.1mRNA_H-canaliculatus_F_contig12308.1978.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12308 335..2008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12308.1978.1 ID=prot_H-canaliculatus_F_contig12308.1978.1|Name=mRNA_H-canaliculatus_F_contig12308.1978.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=64bp
RPGRECQHDRHHRCLHVLRGWMVRSREHEGYAFTGCGAHVDYTLDLGSGA
GYERVWCYVRHVL*
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