mRNA_H-canaliculatus_F_contig1229.1960.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1229.1960.1
Unique NamemRNA_H-canaliculatus_F_contig1229.1960.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A6H5KZU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU7_9PHAE)

HSP 1 Score: 542 bits (1397), Expect = 1.300e-177
Identity = 279/352 (79.26%), Postives = 307/352 (87.22%), Query Frame = 3 
Query:   66 ACSSAGQVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAA-DDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD 1118
            A   A +VQ+LRFRKRL+PYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMAS DGWWN+++R+W A+    AD R RR   GTGAA SPLVVE +  D A +DGD  ASEEKEL+ KV+ EPVP+TIAALKNHH YVLGK LLKFEALRPGAKAAGLVKGSKVYLKTDVA LRGASRWKKDALQV+KSEL KPVK+ATKKGEK+GEGTSKLYGDWQTEPW PEAA +GKVPKNEYGN+EFFD SPAFLP GT H+RG+QI R+AAKLGVD+APALTGFETK GRQVPVLDGIIVCKEQ QMLRDAH  W+Q  LEK+ K RG++VLRRWRTL +GVLLGAQLLEEYG H+
Sbjct:  692 ALDQADKVQELRFRKRLMPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASADGWWNRSMRKWGAS----ADRRSRRKVIGTGAASSPLVVEGQRDDEANEDGDQGASEEKELQEKVDKEPVPNTIAALKNHHKYVLGKKLLKFEALRPGAKAAGLVKGSKVYLKTDVATLRGASRWKKDALQVKKSELDKPVKLATKKGEKEGEGTSKLYGDWQTEPWAPEAAVDGKVPKNEYGNLEFFDCSPAFLPTGTAHLRGEQIGRLAAKLGVDYAPALTGFETKVGRQVPVLDGIIVCKEQSQMLRDAHMTWQQMQLEKQVKVRGERVLRRWRTLFKGVLLGAQLLEEYGSHE 1039
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: D8LJY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY2_ECTSI)

HSP 1 Score: 516 bits (1329), Expect = 4.880e-168
Identity = 269/352 (76.42%), Postives = 295/352 (83.81%), Query Frame = 3 
Query:   66 ACSSAGQVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAA-DDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD 1118
            A   A +VQDLRFRKRL+PYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMAS DGWWN++LR+W A+    A                PLVVE    D A +D D  A EEKEL+ KV+NEP+P+TIAALKNHH YVLGK LLKFEALRPGAKAAGLVKGSKVYLKTDVA LRGASRWKKDALQV+KSEL KPVK+ TKKGEK+G+GTSKLYGDWQTEPW PEAA +GKVPKN+YGNVEFFD SPAFLP GT H+RG+QI R+AAKLGVD+APALTGFETK GRQVPVLDGIIVCKEQ QMLRDAH  W+Q+ LEK+ KAR Q+VLRRWRTL +GVLLGAQLLEEYG HD
Sbjct:  644 ALDQADKVQDLRFRKRLMPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASADGWWNRSLRKWGAS----AHRXXXXXXXXXXXXXXPLVVEGHGDDEANEDDDQGAIEEKELQEKVDNEPIPNTIAALKNHHKYVLGKKLLKFEALRPGAKAAGLVKGSKVYLKTDVATLRGASRWKKDALQVKKSELEKPVKLTTKKGEKEGDGTSKLYGDWQTEPWAPEAAVDGKVPKNDYGNVEFFDCSPAFLPTGTAHLRGEQIGRLAAKLGVDYAPALTGFETKVGRQVPVLDGIIVCKEQSQMLRDAHMTWQQTQLEKQVKARRQRVLRRWRTLFKGVLLGAQLLEEYGSHD 991
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: W2QJ20_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2QJ20_PHYPN)

HSP 1 Score: 191 bits (484), Expect = 1.560e-48
Identity = 125/351 (35.61%), Postives = 192/351 (54.70%), Query Frame = 3 
Query:   87 VQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSK---------LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQK-VLRRWRTLCRGVLLGAQLLEEYG 1109
            V+ LR +     YVV+  +  L+VDVT RY+++W+++L  R       D W  Q + Q+        D   +R    T  +G+   VE+ + +          E+K+LE     E +P+++   + HH+Y+L + L +FE L P  KA GL KG  V+L+  V  L  A +W++   +V++SE  KP K  +K  + D    S+         L+G WQT  + P    NG +PKN+YGN+E +  SPA +P G VH+R  +I  +A  LG+DFAPA+ GFE + GR +P + GI+V +   +ML DAH   +Q  +EK A A  QK VL+RW  L + +LL  +L ++YG
Sbjct:  329 VESLRGKAARFSYVVSIQDDGLVVDVTSRYTAQWSKSLELR-----LADSWLTQVIEQFNE------DTMDQRPVDKTSRSGN---VEKSIVE----------EKKKLETLKLAEGMPTSLEGFRKHHLYILERYLGQFECLHP-RKAIGLFKGQPVFLREHVQPLESAFKWRRLGREVKESERQKPAKWQSKGNDNDDSDASEEGKPSGSLALFGLWQTTEFEPLPMINGHIPKNKYGNIEIW--SPAHIPRGAVHLRLPRIDSIAESLGIDFAPAVVGFEVRNGRPMPKMSGIVVAQSHEEMLLDAHAERQQQTIEK-AIAHNQKLVLKRWENLTKRLLLRQRLEDDYG 651
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A8K1CMS4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMS4_PYTOL)

HSP 1 Score: 186 bits (471), Expect = 1.210e-46
Identity = 123/356 (34.55%), Postives = 188/356 (52.81%), Query Frame = 3 
Query:   84 QVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKK----GEKDGEGTSK---------LYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGD 1112
            ++Q  R + R + YVV+ + + ++ DV+ RY   W++TL  R       D W+  +L    A++      R   A+A          VE  + D          E  EL +   +E +P+++   K HHVY L ++L ++E + P  KA G+ KG  VY +  V  +R   +W++   +++  E  KP K   K     G+ D +G S          LYG WQT+     A  NG VPKN+YGN+E +  SPA LP G+VH+R  +I RVA++LGVDFAPA+ GFE K G+  P ++GI+V      ML DAH   +QS +E+  +   Q +L+RW  L + +LL  +L +EYG+
Sbjct:  346 EIQTARGKSRPLSYVVSINAEGILTDVSSRYVDRWSKTLPLR-----LADDWFTHSLSLVNASIDDKCVWRDPEARA----------VELRLQD---------KERDELTSLKQSEEMPNSLEGFKKHHVYCLERHLGRYECIYP-RKAVGIFKGQAVYPRKSVQTVRTMFQWRQLGREIKAEEQQKPAKREGKPSKGGGDSDDDGISPGGSGAVGRALYGFWQTDEVTVAAVENGVVPKNKYGNIEVW--SPAHLPRGSVHLRLSRIERVASQLGVDFAPAVVGFEVKNGKNYPKIEGIVVAATVEAMLVDAHAHIQQSTIEQAIEKNQQAILKRWERLVKRLLLKQRLNDEYGE 674
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A662X493_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X493_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.670e-46
Identity = 127/357 (35.57%), Postives = 190/357 (53.22%), Query Frame = 3 
Query:   84 QVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEK-ELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGE--------------KDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYG 1109
            QV+ LR +     YVV+  +  +IVDVT RY+S+W+++L  R       D W  Q ++ +    V     RQR     T     PLV        A+D D   ++EK +L+A    E +P+++   + H  Y L ++L +FE L P  KA GL  G  V+L++ V   + A +W++   +V+ SE  +P K  ++ G+              + G  +  L+G WQT    P A  +G+VPKN+YGN+E +  SPA +P   +H+R  +I  VA  LGVDFAPA+ GFE + GR VP  DGI+V K    +L DAH   +Q+ ++K  +   Q  LRRW  L R +LL  +L E+YG
Sbjct:  349 QVEPLRGKTARFSYVVSIQDDGVIVDVTPRYASQWSKSLELR-----LADSWLKQVIQHFNQDTV-----RQRSLSHLTT---GPLVT-------AEDADRLLADEKRKLQAMTLTEGMPTSVEGFRKHPTYCLERHLGQFECLHP-RKAVGLFSGQPVFLRSHVYPAQSAFKWRRLGREVKASEREEPAKWHSRGGKSGNAANSDGSDDDGRPGGASMALFGLWQTVEIEPPAMVDGRVPKNKYGNIEVW--SPAHIPRDALHLRLPRIEAVAQALGVDFAPAVVGFELRNGRTVPKTDGIVVAKVAGVLLLDAHAHKQQAAIDKAIRLNRQLALRRWAKLTRRLLLRRRLEEDYG 682
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A329RR13_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RR13_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.110e-45
Identity = 120/356 (33.71%), Postives = 189/356 (53.09%), Query Frame = 3 
Query:   84 QVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDG-------------EGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQK-VLRRWRTLCRGVLLGAQLLEEYG 1109
            +V+ LR +     YVV+  +  L+VDVT RY+ +W+++L  R       D W  +++ ++           +  A+         LV   +V +A         E+K+LE     E +P+++   + HH+Y+L ++L +FE L P  K  GL KG  V+L+  V  LR A +W++   +V++SE  KP K  +K  +  G              G+   +G WQT  + P    +G+VPKN+YGN+E +  SPA +P G VH+   +I  +A  LG+DFAPA+ GFE + GR +P + GI+V +   +ML DAH   +Q  +EK A A  QK VL+RW    + VLL  +L ++YG
Sbjct:  328 EVEPLRGKAARFSYVVSIQDDGLLVDVTSRYTVQWSKSLELR-----LADSWLKRSIERFNEDTTDQRPVTEAAAR---------LVRPGDVENAL------VQEKKKLETLKLAEGMPTSLEGFRKHHLYILERHLGQFECLHP-RKVIGLFKGQPVFLREHVQPLRSAFKWRRLGREVKESERQKPAKWQSKGSDPGGGDDSDEALQEGKPSGSLAFFGLWQTTEFEPPPMVDGRVPKNKYGNIEVW--SPAHVPRGAVHLHLPRIDAIAESLGIDFAPAVVGFEVRNGRPMPKMSGIVVAQSHEEMLLDAHAERQQQAIEK-AIAHNQKLVLKRWEKFTKRVLLRQRLEDDYG 659
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: UPI00077A79C6 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A79C6)

HSP 1 Score: 177 bits (450), Expect = 4.500e-45
Identity = 118/335 (35.22%), Postives = 176/335 (52.54%), Query Frame = 3 
Query:  117 IPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAA-GLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELG-KPVKIATKKGEKDGEGTS---KLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEY 1106
            + YV++ D K  I DVT RY+S W     ++ R +   D WW + LR +          + R  K                         +  E+ +LE K+  +P+P++I   KNH +YVL ++LLKFEA+ P   A  G  +G  +Y +  V  L    +W  +AL V++ E   K VK   K+ +   E  S    L+G WQTE + P  A +GKVP+NEYGNVE F   P  LPPGT H++ + I RVA KLG+D A A+ GF+   G   PV+DG++VC+E  Q+L DA    E+    ++A+ R +++L  W+ L R +L+  +L + Y
Sbjct:  114 LTYVISFDNKNAIKDVTNRYASSWM----SKTRKLRIDDDWWQETLRPF----------KSRNKKM------------------------NELEDSQLEDKLLEKPLPTSITEFKNHPLYVLKRHLLKFEAIYPETAAILGYCRGEAIYSRDCVHLLHTREKWLNEALVVKQGEKAYKVVKGRPKRNQPIHERDSVTIDLFGRWQTERYKPPPAKDGKVPRNEYGNVELF--LPCMLPPGTKHIQINGIQRVAKKLGIDCAQAVVGFDFHCGFSHPVIDGVVVCQEFEQVLLDAWREEEELAERRKAEKREKRMLANWKLLTRSLLIRERLKKRY 408
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BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A662YHT1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHT1_9STRA)

HSP 1 Score: 181 bits (460), Expect = 9.840e-45
Identity = 125/357 (35.01%), Postives = 189/357 (52.94%), Query Frame = 3 
Query:   84 QVQDLRFRKRLIPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEK-ELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRPGAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKD--------------GEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYG 1109
            QV+ LR +     YVV+  +  ++VDVT RY+S+W+++L  R       D W  Q ++Q+          RQR       A GS L        AA+D D   ++EK +L+A    E +PS++   + H  Y L ++L +FE L P  KA GL  G  V+L++ V   + A +W++   +V+  E  KP K  ++ G+ +              G  +  L+G WQT    P A A+G+VPKN+YGN+E +  SPA +P G VH+R  +I  VA  LGVDFAPA+ GFE + GR VP  DG++V +    +L +AH   +Q+ +E+      +   RRW  L   +LL  +L E+YG
Sbjct:  440 QVEPLRGKAARFSYVVSTQDDGVVVDVTPRYASQWSKSLELR-----LADSWLKQVIQQFNQDAA-----RQRTLS--RLATGSALF-------AAEDADRLLADEKRKLQAMTLTEGMPSSVEGFRKHPTYCLERHLGRFECLHP-RKAVGLFNGQPVFLRSHVFPAQSAFKWRRLGREVKAGEREKPAKWHSRGGKTETAANSDGSDDDGRPGGASMALFGLWQTAEIEPPAMADGRVPKNKYGNIEVW--SPAHIPRGAVHLRLPRIEAVAQALGVDFAPAVVGFELRSGRTVPRTDGVVVAQAAELLLLEAHAHRQQAAIERAIGLNRRLARRRWARLATRLLLRRRLEEDYG 774
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: A0A7R9I670_9NEOP (Hypothetical protein n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9I670_9NEOP)

HSP 1 Score: 172 bits (436), Expect = 1.250e-44
Identity = 117/335 (34.93%), Postives = 173/335 (51.64%), Query Frame = 3 
Query:  117 IPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLE---KRAKARGQKVLRRWRTLCRGVLLGAQLLEEYG 1109
            + YVVA +  + + DVTRRY S++   + TR + +A+   WW  +LR WR +  P                                      EE++LE ++++ P+PS     KNH +YVL K+LLKFEA+ P  A   G ++G +V+ +  V  L     W K+A  VR  E  KP KI   + + D     +++G+WQ E ++P  A +GKVP+N YGNVE F   P  LP GTVH++ + ++RVA KL +D APA+ GF+   G   P  DG +VC+E   +L DA   W Q L E   +R     ++V   WR L +G+L+  +L   Y 
Sbjct:    7 VTYVVAFNVDQTVRDVTRRYCSQYH--VVTRKQRVAAD--WWEHSLRPWRGSWTPM----------------------------------DKEEEEDLEQQLHDRPLPS----YKNHPLYVLRKDLLKFEAIYPPDAPTLGFIRGQEVFARECVKNLHSRETWVKEAKVVRLGE--KPYKIVKARPKYD-----RVFGEWQVEDYIPPPAVDGKVPRNAYGNVELF--KPCMLPKGTVHLQINGLNRVAKKLNIDCAPAVVGFDFHCGGSHPTYDGFVVCEEFVDILLDA---WNQELEESEKRRQDKHDKRVYGNWRRLIKGLLIRERLQARYS 287
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Match: UPI0018D989F2 (DNA repair protein complementing XP-C cells homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D989F2)

HSP 1 Score: 180 bits (456), Expect = 2.920e-44
Identity = 116/336 (34.52%), Postives = 172/336 (51.19%), Query Frame = 3 
Query:  117 IPYVVAEDEKKLIVDVTRRYSSEWARTLRTRGRAMASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADAADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP-GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKI--ATKKGEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPPGTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQMLRDAHTAWEQSLLEKRAKARGQKVLR---RWRTLCRGVLLGAQLLEEY 1106
            I Y++A D +  + DVT+RY+S+W          + +P  WW   L+ +   ++                                       E++ L+ ++  +P+P++I+  KNHH+YVL ++LLKFEAL P  A   G  +G  VY +  V  L     WKK  L ++  E  KP K+  A  +  K  E    LYG WQTE ++P AA +GKVP+NEYGNVE F   P+ LP GTVH++   + RVA K+GVD APA+ G++   G   PV DG +VCKE   +L D    WE+   E+  K   +K +R    W+TL  G+L+  +L + +
Sbjct:  440 ICYIIAVDNENCVKDVTKRYASKWMHETEK----LRAPLVWWENTLKPYHTKLIKK----------------------------------DKEEDEHLQKQLQEKPMPTSISEFKNHHLYVLKRHLLKFEALYPESATILGYCRGEAVYSRNCVHTLHTKETWKKQGLAIQHGE--KPYKMVKARPRKNKSHEPLLPLYGQWQTELYIPPAAVDGKVPRNEYGNVELFQ--PSMLPMGTVHLQIPGLHRVAQKIGVDCAPAMVGWDYHGGFCHPVFDGFVVCKEFTDILLDN---WEKDNAEREHKLNQKKRIRAEKNWKTLVTGLLIRERLNDRF 730
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1229.1960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZU7_9PHAE1.300e-17779.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJY2_ECTSI4.880e-16876.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2QJ20_PHYPN1.560e-4835.61Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A8K1CMS4_PYTOL1.210e-4634.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X493_9STRA4.670e-4635.57Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A329RR13_9STRA3.110e-4533.71Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
UPI00077A79C64.500e-4535.22DNA repair protein complementing XP-C cells homolo... [more]
A0A662YHT1_9STRA9.840e-4535.01Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7R9I670_9NEOP1.250e-4434.93Hypothetical protein n=1 Tax=Timema bartmani TaxID... [more]
UPI0018D989F22.920e-4434.52DNA repair protein complementing XP-C cells homolo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1229contigH-canaliculatus_F_contig1229:1142..7572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.9
Seed ortholog evalue3.1e-119
Seed eggNOG ortholog2880.D8LJY2
Preferred nameRAD4
KEGG koko:K10838
KEGG Pathwayko03420,map03420
GOsGO:0000109,GO:0000111,GO:0000217,GO:0000404,GO:0000405,GO:0000715,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006294,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007346,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009987,GO:0010564,GO:0016020,GO:0016043,GO:0022607,GO:0030983,GO:0031974,GO:0031981,GO:0032135,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034644,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051716,GO:0051726,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070911,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0071942,GO:0071944,GO:0090304,GO:0097159,GO:0104004,GO:1901360,GO:1901363,GO:1901987,GO:1901990,GO:1990391
EggNOG free text desc.mismatch repair
EggNOG OGsCOG5535@1,KOG2179@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRad4 beta-hairpin domain 2
Ec32 orthologEc-06_007410.1
Exons8
Model size2035
Cds size903
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1229.1960.1prot_H-canaliculatus_F_contig1229.1960.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1229 2334..6658 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928944.481479-UTR-H-canaliculatus_F_contig1229:1141..12271622928944.481479-UTR-H-canaliculatus_F_contig1229:1141..1227Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 1142..1227 +
1696845623.5771585-UTR-H-canaliculatus_F_contig1229:1141..12271696845623.5771585-UTR-H-canaliculatus_F_contig1229:1141..1227Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 1142..1227 +
1622928944.5048301-UTR-H-canaliculatus_F_contig1229:2063..21491622928944.5048301-UTR-H-canaliculatus_F_contig1229:2063..2149Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 2064..2149 +
1696845623.5901687-UTR-H-canaliculatus_F_contig1229:2063..21491696845623.5901687-UTR-H-canaliculatus_F_contig1229:2063..2149Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 2064..2149 +
1622928944.5292702-UTR-H-canaliculatus_F_contig1229:2287..23331622928944.5292702-UTR-H-canaliculatus_F_contig1229:2287..2333Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 2288..2333 +
1696845623.600896-UTR-H-canaliculatus_F_contig1229:2287..23331696845623.600896-UTR-H-canaliculatus_F_contig1229:2287..2333Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 2288..2333 +
1622928944.645082-UTR-H-canaliculatus_F_contig1229:6658..75721622928944.645082-UTR-H-canaliculatus_F_contig1229:6658..7572Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 6659..7572 +
1696845623.6741467-UTR-H-canaliculatus_F_contig1229:6658..75721696845623.6741467-UTR-H-canaliculatus_F_contig1229:6658..7572Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1229 6659..7572 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928944.5459628-CDS-H-canaliculatus_F_contig1229:2333..24261622928944.5459628-CDS-H-canaliculatus_F_contig1229:2333..2426Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 2334..2426 +
1696845623.6106908-CDS-H-canaliculatus_F_contig1229:2333..24261696845623.6106908-CDS-H-canaliculatus_F_contig1229:2333..2426Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 2334..2426 +
1622928944.5613213-CDS-H-canaliculatus_F_contig1229:3133..32531622928944.5613213-CDS-H-canaliculatus_F_contig1229:3133..3253Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 3134..3253 +
1696845623.6199977-CDS-H-canaliculatus_F_contig1229:3133..32531696845623.6199977-CDS-H-canaliculatus_F_contig1229:3133..3253Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 3134..3253 +
1622928944.577235-CDS-H-canaliculatus_F_contig1229:4297..44861622928944.577235-CDS-H-canaliculatus_F_contig1229:4297..4486Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 4298..4486 +
1696845623.628539-CDS-H-canaliculatus_F_contig1229:4297..44861696845623.628539-CDS-H-canaliculatus_F_contig1229:4297..4486Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 4298..4486 +
1622928944.5932398-CDS-H-canaliculatus_F_contig1229:4981..51161622928944.5932398-CDS-H-canaliculatus_F_contig1229:4981..5116Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 4982..5116 +
1696845623.639435-CDS-H-canaliculatus_F_contig1229:4981..51161696845623.639435-CDS-H-canaliculatus_F_contig1229:4981..5116Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 4982..5116 +
1622928944.6091099-CDS-H-canaliculatus_F_contig1229:5433..56461622928944.6091099-CDS-H-canaliculatus_F_contig1229:5433..5646Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 5434..5646 +
1696845623.653116-CDS-H-canaliculatus_F_contig1229:5433..56461696845623.653116-CDS-H-canaliculatus_F_contig1229:5433..5646Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 5434..5646 +
1622928944.6299832-CDS-H-canaliculatus_F_contig1229:6505..66581622928944.6299832-CDS-H-canaliculatus_F_contig1229:6505..6658Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 6506..6658 +
1696845623.6636095-CDS-H-canaliculatus_F_contig1229:6505..66581696845623.6636095-CDS-H-canaliculatus_F_contig1229:6505..6658Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1229 6506..6658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1229.1960.1

>prot_H-canaliculatus_F_contig1229.1960.1 ID=prot_H-canaliculatus_F_contig1229.1960.1|Name=mRNA_H-canaliculatus_F_contig1229.1960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=301bp
MASPDGWWNQALRQWRAAVVPAADGRQRRAKAGTGAAGSPLVVEEEVADA
ADDGDPSASEEKELEAKVNNEPVPSTIAALKNHHVYVLGKNLLKFEALRP
GAKAAGLVKGSKVYLKTDVAKLRGASRWKKDALQVRKSELGKPVKIATKK
GEKDGEGTSKLYGDWQTEPWVPEAAANGKVPKNEYGNVEFFDRSPAFLPP
GTVHVRGDQISRVAAKLGVDFAPALTGFETKQGRQVPVLDGIIVCKEQCQ
MLRDAHTAWEQSLLEKRAKARGQKVLRRWRTLCRGVLLGAQLLEEYGDHD
*
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mRNA from alignment at H-canaliculatus_F_contig1229:1142..7572+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1229.1960.1 ID=mRNA_H-canaliculatus_F_contig1229.1960.1|Name=mRNA_H-canaliculatus_F_contig1229.1960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6431bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1229:1142..7572+ (Hapterophycus canaliculatus Oshoro5f female)
AGTGCTGGCGCTGGCCCTGGCGCTGGCGTCGCTGTTGCCGCGGCAGCTAT
TTCTCATTCACCCGGGCCTGCAGCAGCGCGGGACAGGTGGGTCCACGTTG
ATCCTGTCCAGGGCGCGGTGGACCAAGCCGAAAAGGTGGGCATCGGCGGC
CGGCCACGGTTTTGGCGACGGCGGAGAGTCCTTCGCTCTTCCGCCGCCTC
GTCCCCCCCGTGTGTGTGCTTTTTGGCGGGGCTCATACCGCTCGCTTGTC
CCGCGCGTTGCCGAGCTTTCCACCAGCCGCTCGTTTTCTTGTTTTTTGCT
TTCCTTGGCAGCGTGGTGTCCGCTTGTCTTCGCGTTGGGTGCGGTAGAGG
TGGGTTGAAGGCCGCTTGTAGCGAAAACGCTCCTCGAAAGCTGAGAGCAT
AACACGTTTCCGGAGGTGTCGGGTGCGCCGAGTTCTACGAGCAGCTCTCT
CTCAGGCTTTCGATTAATCTGCAGATAAAGCTCCCGGTGTCGCTCCTTCC
TCTCACCATGTCTTCGTCTCTCTTTGCGTTGTGTGTGTGTTTTCCCTGTT
CGGTCACATCCTCGTCATTCTTGGTCCTCCATCCTCATCGTTCGATTGAT
AGTCATCTATGTCGTGCGTCTGCTTCTGTGTCCTTCTTATCAGTGTCTGA
CCTATAGTCGATGCCTGCGTGTCTGTGGCTGTGTTTGCGCCATGTCTGCT
GTCTCTCGCTGTCTCTCTCTGTCTCTCTTCGTGTCTCTCTTCATTTCTCT
CTGCCCTCTGTGTCTCGTCGTTGCAGCATCTACTTCGCGAGGGCGCAACC
ACATGCCGCCCTGTAGTCTTCCTGCTCCAAAAGCTTTTCTTCCATCCCAT
CCCTGCCTGCAACCCAAACTCACACGTCACGTGTCGAACGTCTTACGTTT
CATCTTGCGTGTGCGCGTTCAGGTCCAGGACCTGCGTTTCAGGAAACGGT
TGATTCCCTACGTTGTGGCCGAGGACGAGAAAAAGCTCATCGTCGACGTC
ACACGGAGGTGCGAGTGCACGTGCTTCCTTTTTAATTTTCGTAGCCGGTG
GGGGGGTTGGTTGTGTCTAAACAGTTTTGTGCCGTGAACGAGGACGAGGC
CGTCAACATAAACAATACCTCCGACGGCAAACAACAACCGCGACAGGTAC
TCTTCAGAGTGGGCCCGAACCCTACGGACAAGAGGGCGCGCCATGGCCAG
CCCGGACGGCTGGTGGAATCAGGCTCTGCGACAGTGGAGAGCGGCGGTAG
TGCCGGCGGCAGATGGGCGCCAGAGACGAGCCAAGGTTGGACCCCGATTG
GTGTTTCAGAAGATTCCGCTTGGCGTGCCTTGGTGATTCTCGTTCTCGGG
TAGATGTCACGGTCCGCTCGGTTGCCTTTTTGTTCCCCTCGTGGGGGTGA
TCGAAATGGTCCACCGTTTCAAGCATGTGCTGCCGAACGCTAGGTTAGTG
CGGTGATGGTGGGTGGGGATGGCGTGTTTGTGATGGTAATGATCGATCGA
TTCGTGTCAAACAAGTGCCAACTCGGTGGGTCCGGTTAGGTGGTGGGTTG
TTTTCTGCCACGACGCCGGAGCTCCGTGCCCTGCGACCAGAAAACACGCA
TGGCCGATAACACCCCGCACCGACCCCCTGGATTGAGGTTGATGTTGCCC
ATCTCTCTGCTCCTTCTGCTGTTGCTGCTGCTGCGTGCGCCTGGTACCTA
CGGCGAGCACAGCGCAGCAGTATTGACGGGACCACCTGCGTCGTTGCCCG
TTCGCGGCTTCCGTCGTTTTTTTTTGTGAGAAAAATATTCAACACGGGAG
GCACGTATCAGCAGGCCTCTCACGAGACTTGAGTTGGATTTCCATGTTAC
AGTGAGGGCTCATACATAGCGTTGGACGTTTCTTTTGTTTCGGATGCTGC
TTCATTCTTTCTCTGGGCTGCGGCCAGACAAGAATACAAATCATGCACCC
CCCCCCCCCGAACCACCGTGGCTTTCCCTCATGCGTGCGCAGGCCGGTAC
GGGTGCGGCGGGAAGCCCGCTGGTGGTAGAGGAGGAGGTAGCTGATGCGG
CGGACGACGGCGATCCTAGCGCAAGCGAGGAGAAAGAGCTCGAGGCTAAG
GTCAACAACGAGGTGGGGGGAGGGTACGCGGCGCCCACCGCGCATGATCT
CCTTGTTTGTCTTTGAGGCTCGTTCTTTCGCGTCCCTGCTCCTCCCTCCC
TCGTCGCGGTGTTCTTCGCGACGGTAGGCAAGCGGTTGGCGTCGCTTCTG
TGACGATTTCCCTCGAGAGTGGGCAGATCACTCGCCTACCTCAAAGACTC
GTTACCGTACGTCGGACTTTCTGCAAGAGCCAACATCCCTTTGCTGTCCT
TCTTACTATCTTGTAAAACATCTTGAACCGTATCCTCAAGGTTTCTCCTT
TCGCTCAGACACGAGAAGGCCATCCCCTCGCGGCCACAGCCTGTGTCGAG
GGCTAGGGACGACCACCGCAACCAGGCGACCTGCCGCAATCGCACTGCGC
GCACATCCATCTTGCCCGCTCCTGCGCCCGTCGACCCCGAAACGCGCGCG
TCGCCGATGGGCTTCGCCTAGATGGTCGTGGCTGCCGTGCCTCAACGTCG
CGTGACAAGGTTTTCGCTGCTTGGCGGACATCCTCCGTCGGTGGTTGGAT
ACCTCTCTTGGCTCTCATTTGCACAAAATAAGGAGCGAGTGTCGGGAAGG
AGACGCGGACTCGTCGTTCCTCTTCCCTCCTGGCGCATCCCTTCCTCTCT
ACCGATGCCGTTCCCGGTCTGTGCAAGAGCCGCGAGAGAAGCACAATGCC
ACCGAAACAAGAAATCCACGCCCGACAACAACCTCTGAACCTGCTCGATT
AATTCCCTTTCGTTTTTTTCTCTCCTCCTCGCTTCCTGCCTCTTGGAGAT
GGCCTTTGGATGTGCAACGCCCCACATCGGCGGTGTGTTTGTCGTGCCCA
CGCAATCGAACGGACGCCCCGAGGTCTTCGACGTAGTAAAGCCCAACCCG
CACGTCAACAACATCCAGCCCAAGCCCCGATCACCCCCCCTATCCACCCG
CTTTGTTTGCACGACTCCGCGGCCTCCCGCTCCTCCTTCCCTCTCGCTGC
CCTGCCCTGCCCTGCGCTGCCCTTCGTTGCTCTTGTGTTTCCGTGCCGGG
AAACAGCCTGTGCCAAGCACCATCGCCGCGCTGAAGAACCACCACGTCTA
CGTTCTCGGCAAGAATCTGCTCAAGTTCGAGGCGCTGCGACCGGGGGCGA
AGGCAGCGGGGCTCGTCAAGGGCAGCAAGGTGTACCTCAAGACGGACGTC
GCAAAGCTGAGGGGCGCCAGCCGATGGAAGAAGGATGCGCTTCAGGTGGG
AGTGCTTGGGTCTGGGTTCGCCCTCATGCGCGTGATTTCCGTCTGTAACA
TCGATTTCGCTAGCTGCGTGACCAATGGAAAGTCGGCGCTCCTCGGGACG
GAAGCGACTGGCTTTCTCGGTCTCTGCCTCTGTCTCTGTCTCTGTCTCTT
TCTTTCTCTTTTACCCCGTGTGCGCCTTTGTGCTAGCGTGGTCGTCGACT
CTGGTCTTGTTTTGGCTACTCTCTTTTGTTTGTTCCGTTGATTCCGCTAG
GGAGCTGCGAATCGGCTCGATCGAGGTTGTTGACTTCATCTTGCCCTCTT
GTTTTGGCGGTCTTTTCAGTAGTGAGCGTAAGGCAATCACCCGCAAAATC
CCGCGGTGTTTCGTTCCGGCTATGCGCACGACGAGGTACCGACGCTCACG
GCCAGCGCTGATGCTGAGTGGTCTACCCGCTCCCCCCCTCCAATATCATG
GAGATCCACCCACGAAACCCCGCACGCCGGTATTGTCAAGGTGAGAAAGT
CTGAGCTGGGGAAGCCTGTCAAGATAGCGACCAAAAAGGGTGAGAAGGAC
GGTGAGGGCACGAGCAAGCTCTACGGAGATTGGCAGACCGAGCCATGGGT
GCCCGAGGCTGCTGCGAACGGAAAGGTGCGCTTTGGACGTATTCGTGATC
GAGACATTCCTCCAAAATTTGGCCCTTTTTCTCCGTACAACTATCTGCAC
CGGCACCGGCACCTGCACCTGCACCGGCACCGGCACCGGCACCGGTACCG
GCACAGCACGACCCTCGTGAGCGTCAAACCAGGTGCACTTTTCTCTGACC
TAAGCACAGGTGGGCGTCTTTGGCGGATGCCTAACCACGTTCCCCCGCCA
CTCGTCACGTCTCGATTATCCCTCCGCCCGCCCGGATAAACACATTGGTA
CCATAATTGATGGGGGGATAAATTCATGGTTTGACATCTCAGGTACCAAA
GAACGAGTACGGTAACGTGGAGTTCTTCGACCGCAGTCCGGCGTTTTTGC
CGCCGGGGACCGTACACGTACGGGGGGATCAGATCAGCCGCGTGGCGGCG
AAACTCGGGGTGGACTTCGCCCCGGCTCTGACCGGCTTCGAGACGAAGCA
GGGGCGCCAGGTGCCCGTGCTGGACGGGATTATCGTGTGCAAGGAGCAGT
GCCAGGTGTGAGAGCGTGGACACAGAGAGAGATTATCATGGCTGAGGTTG
AGGTAGTGAATTTGTATCGCTGGCTTGATTCATCCGCTAATAGTACGCGT
GTGTGCGATCTGTCAGACTTGCTCGAGTTTGATAAGTTGTCGAGCCTTCC
CCGTTCGCTTCGCGTGTTGTTGAGGATGCTAAGAAGAAGTCTTGTAAGAG
TTATGGAATACAAAATAGTTTGCTCCAACGCGCGAAAGGATGTATGTTGG
GAAAATCAATCGCGGCGCAAAACGCAGCCGTTCTGTTTTGCGAGCTAGAT
GCTTGTCCCCAGAACGAGCCAAGAGTTGCAGCTCGGAATGGATAATGACT
CCAAGCGAAACAGAGGCCGTATGCAGCATGATGATCAACGAATGTGGCAC
ATCTCGAGGTGGAAGCGACTGTTATCCCCACGTGTGTAGCCATGCCTCAC
GTCGAGAAAGGCGCAGACGATTTTCTCCAGAGTCGCGGTTCGAATGCGTT
TGCAACGGTCGAAGAGTCTTGAATCGAGCAAGAAGGTACCTCTCCCCCCC
ACCCCCGCCCCCCCGCCTCGCACTCACACGGCATGCCCAGTGCCGGCTTG
ACCCGGCTAGCGGGAGACCAGCTGCTTTTCTACAGCTTATCGAGCACCAA
TTTTGATATCCCTCGCTGCACGTTAGCGGAGCCACGCGCACGGTTGTCCT
TGACGAGCCCTGCCCCACGTTTTTGCTTTCCACCGCGACACTCTACAAGT
AGCTAGCGACGTCAACCCACAGATCTCGCCCGATCCGTCGCTCCCCTGCG
ATGAAAAAAGACGCTTGCTGCTCTCGCCCCCGCGGGTGTTTTTTTCTGAT
ACACTTTTCGTTAGATGCTGCGAGATGCTCACACGGCCTGGGAGCAGTCG
CTGCTCGAGAAGCGCGCCAAGGCCCGTGGGCAGAAAGTGCTCCGCCGCTG
GCGCACGCTTTGCCGGGGAGTTCTGCTGGGCGCTCAGCTGCTGGAGGAGT
ATGGAGATCACGATTGATCAATGGTTCTACCATATTTCCTCTTGATAGTA
CGTCGTGTTTCGTCTCATCCACAGCTGTTGAAAGCCGTTGATGGTCGAGT
TGGTGCAGCCCGGATTGCTTGGTGGGCCCACCCAACTCTGCCATTTATCG
CATCCGGTCTCCGTTCATGTAATGTTTTTTTGGGCCGAGGGATGGCGGCG
GTTACCCACCAGGCTCGAGGAAATGTTTTGGGAGATAATTTTGCGGATAG
GATTCGCTTTTTGACCTTCTTCGATAAAGTGTTATAACACAGGTGATGCG
AACGACGCTTAAGCCCTTTGGAACACCGCAATCTTCTTCATCCTTTGACA
CCGACTTGTGCCTATAGGTCGTGGATCGCAACGAAAAGGTTGTGCGGCTG
CCTCTGGCGCCTCCGCAGTTCTGGGATTAGAAAAAGACGGGTTGAGTTGT
ACTGTGCTGGGCTGATACGCTCATATCTGTGTACGGTCGGTTGAAGAATG
CCAGAGAGATTTGTTTTTCGTCGCAACTTGTTCCGAGGAAGGACCGAAGA
GCCGAGAGAAAGAAGGTTGAAGGTTGCTTTCTCCCTCGATCGAGTCTCTG
AGCATATATCCAGATTGCCGCCCGTCTTGACTACAAGCATTGACGGCAGC
TTTTCTTACCGCACGTTGTGCGTGTGGCATGTTCGTGGGCTTGCCCTGCT
AGTCGTTTTATTAGATAATGCTTTGCAGGCACACCAGGACGAACAAACGC
TGTGTGATAACCCATCGACGACTTCTCCAGTCCTGTAATTCAAGTAGGGT
TGACTTCGTTACAGCACTGCCATGGACTTTTTGTTTGCTCCCTGCCCGTT
GAAAAATAGATCTTCCAACTTGCGTGTCCCGTCCCACCGTATAATGTCAC
TGCGTATCGTATGGGTACGGGTTCAACCTCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1229:1142..7572+

>mRNA_H-canaliculatus_F_contig1229.1960.1 ID=mRNA_H-canaliculatus_F_contig1229.1960.1|Name=mRNA_H-canaliculatus_F_contig1229.1960.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1806bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1229:1142..7572+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCCAGCCCGGACGGCTGGTGGAATCAGGCTCTGCGACAGTGGAGAGC
GGCGGTAGTGCCGGCGGCAGATGGGCGCCAGAGACGAGCCAAGATGGCCA
GCCCGGACGGCTGGTGGAATCAGGCTCTGCGACAGTGGAGAGCGGCGGTA
GTGCCGGCGGCAGATGGGCGCCAGAGACGAGCCAAGGCCGGTACGGGTGC
GGCGGGAAGCCCGCTGGTGGTAGAGGAGGAGGTAGCTGATGCGGCGGACG
ACGGCGATCCTAGCGCAAGCGAGGAGAAAGAGCTCGAGGCTAAGGTCAAC
AACGAGGCCGGTACGGGTGCGGCGGGAAGCCCGCTGGTGGTAGAGGAGGA
GGTAGCTGATGCGGCGGACGACGGCGATCCTAGCGCAAGCGAGGAGAAAG
AGCTCGAGGCTAAGGTCAACAACGAGCCTGTGCCAAGCACCATCGCCGCG
CTGAAGAACCACCACGTCTACGTTCTCGGCAAGAATCTGCTCAAGTTCGA
GGCGCTGCGACCGGGGGCGAAGGCAGCGGGGCTCGTCAAGGGCAGCAAGG
TGTACCTCAAGACGGACGTCGCAAAGCTGAGGGGCGCCAGCCGATGGAAG
AAGGATGCGCTTCAGCCTGTGCCAAGCACCATCGCCGCGCTGAAGAACCA
CCACGTCTACGTTCTCGGCAAGAATCTGCTCAAGTTCGAGGCGCTGCGAC
CGGGGGCGAAGGCAGCGGGGCTCGTCAAGGGCAGCAAGGTGTACCTCAAG
ACGGACGTCGCAAAGCTGAGGGGCGCCAGCCGATGGAAGAAGGATGCGCT
TCAGGTGAGAAAGTCTGAGCTGGGGAAGCCTGTCAAGATAGCGACCAAAA
AGGGTGAGAAGGACGGTGAGGGCACGAGCAAGCTCTACGGAGATTGGCAG
ACCGAGCCATGGGTGCCCGAGGCTGCTGCGAACGGAAAGGTGAGAAAGTC
TGAGCTGGGGAAGCCTGTCAAGATAGCGACCAAAAAGGGTGAGAAGGACG
GTGAGGGCACGAGCAAGCTCTACGGAGATTGGCAGACCGAGCCATGGGTG
CCCGAGGCTGCTGCGAACGGAAAGGTACCAAAGAACGAGTACGGTAACGT
GGAGTTCTTCGACCGCAGTCCGGCGTTTTTGCCGCCGGGGACCGTACACG
TACGGGGGGATCAGATCAGCCGCGTGGCGGCGAAACTCGGGGTGGACTTC
GCCCCGGCTCTGACCGGCTTCGAGACGAAGCAGGGGCGCCAGGTGCCCGT
GCTGGACGGGATTATCGTGTGCAAGGAGCAGTGCCAGGTACCAAAGAACG
AGTACGGTAACGTGGAGTTCTTCGACCGCAGTCCGGCGTTTTTGCCGCCG
GGGACCGTACACGTACGGGGGGATCAGATCAGCCGCGTGGCGGCGAAACT
CGGGGTGGACTTCGCCCCGGCTCTGACCGGCTTCGAGACGAAGCAGGGGC
GCCAGGTGCCCGTGCTGGACGGGATTATCGTGTGCAAGGAGCAGTGCCAG
ATGCTGCGAGATGCTCACACGGCCTGGGAGCAGTCGCTGCTCGAGAAGCG
CGCCAAGGCCCGTGGGCAGAAAGTGCTCCGCCGCTGGCGCACGCTTTGCC
GGGGAGTTCTGCTGGGCGCTCAGCTGCTGGAGGAGTATGGAGATCACGAT
TGAATGCTGCGAGATGCTCACACGGCCTGGGAGCAGTCGCTGCTCGAGAA
GCGCGCCAAGGCCCGTGGGCAGAAAGTGCTCCGCCGCTGGCGCACGCTTT
GCCGGGGAGTTCTGCTGGGCGCTCAGCTGCTGGAGGAGTATGGAGATCAC
GATTGA
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