mRNA_H-canaliculatus_F_contig1226.1940.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: D7FJM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM0_ECTSI) HSP 1 Score: 475 bits (1222), Expect = 1.570e-154 Identity = 275/465 (59.14%), Postives = 332/465 (71.40%), Query Frame = 1
Query: 202 MSYSCPVCGASSSTVETAATCPLAADWADEERLEFLTSHVAPGDVNARDQMVAFWSKAIAHVFEEASALSLNLDVLAGSS--WDGLTAPGVELAVENMLSTGKLVQRSAIEEEGPGITRRLVVVPLLYLAEMIGVGTLPGKREGEYVNSDVLEASAESIVSYCRRLPSDERTVYLISAGHSKPAADRPAGGEEKQTSPWCFEQLCRAAAAAXXXXXXXXXXXXXXXXXXXSPAAAAATFAPGGREGP---RCPGVGATSRILSRLDGRDMALLAKYLVRTKRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLE 1581
M SCP+C S + E A CPLAAD DEER+EFLTSHVAPGDV+ARD+MV FWS+ +AH FE+A+ LSL+ VLA SS W G+ APG++LA+ +M+S+G+L++RS I E G+ RRLV+ P++YLA M+G+G G+Y N +VLE AE +V YC+ LP DERTVYL++A HS+ AA RP + SPW FEQLCRAAA+ + A AT GR P +C A R+L+R+ D+AL AKYLVRTKRAV EGG+L+V + GGG R +A A +SETE+DLLRLRCTVASLEASASDLG RIQR Q +AL ENR+GQK+AALVH+RRMKQ Q AR+KRLSSL TLETALDQVKQLR+DKQVLEAHEAATSALKACRE GLTVERVE+TLDALAEEMAE +A+G AL QD L G D+GE A LE
Sbjct: 1 MPSSCPICAVSGAGAELAPACPLAADLEDEERMEFLTSHVAPGDVDARDEMVEFWSRVVAHAFEKAACLSLDSKVLATSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVEAETGLARRLVMAPIMYLAGMVGLGGXX--XXGQYANRNVLEDLAEQVVGYCQHLPPDERTVYLLAAVHSETAASRPVA---QHASPWNFEQLCRAAASE-------------------AAATTTATRVASGRAPPTPEKCSS--AVPRMLARISSDDVALFAKYLVRTKRAVTEGGLLKVLSRGGGS----RVAAAAA--TVSETEKDLLRLRCTVASLEASASDLGLRIQRVQQDALMENRRGQKQAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATSALKACRETQGLTVERVENTLDALAEEMAEAEAVGTALGQDGALLGQDEGETAELE 433
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A6H5L709_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L709_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 4.870e-142 Identity = 269/471 (57.11%), Postives = 319/471 (67.73%), Query Frame = 1
Query: 214 CPVCGASSSTVETAATCPLAADWADEERLEFLTSHVAPGDVNARDQMVAFWSKAIAHVFEEASALSLNLDVLAGSS--WDGLTAPGVELAVENMLSTGKLVQRSAIEEEGPGITRRLVVVPLLYLAEMIGVGTLPGKREGEYVNSDVLEASAESIVSYCRRLPSDERTVYLISAGHSKPAADRPAGGEEKQTSPWCFEQLCRAAAAAXXXXXXXXXXXXXXXXXXXSPAAAAATFAPGGREGPRCPGVG--ATSRILSRLDGRDMALLAKYLVRTKRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLEAELDALLRGED 1614
CP+C S + E A CPLAAD DEER+EFLTSHVAPGDV+ARD+MV FWS+ IAH FE+A+ LSL+ VL SS W G+ APG++LA+ +M+S+G+L++RS I + VV L L R G+ N +VLE AE +V YC+ LP +E TVYL++AGHS+ +A P + SPW FEQLCR AAAA A A AT GR GP P A R+L+ + D+AL AKYLVRTKRAV EGG+L+V GGG+ A +SETE+DLLRLRCTVASLEASASDLG RIQR Q +AL ENR+GQKRAALVH+RRMKQ Q AR+KRLSSL TLETALDQVKQLR+DKQVLEAHEAAT+ALKACRE GLTVERVEDTLDALA EMAE +A+GAAL Q+ L G D+GE A LEAELDALL +D
Sbjct: 5 CPICAVSGAAAELAPACPLAADLGDEERMEFLTSHVAPGDVDARDEMVEFWSRVIAHAFEKAACLSLDSKVLVTSSLDWGGVVAPGLDLAMSHMVSSGELLERSEIVVFMWKVKGSFAVVTFFVLM-------LRPLRIGK--NRNVLEDLAEQVVGYCQHLPPNESTVYLLAAGHSEASASCPVA---QHASPWNFEQLCRTAAAAAEDA-----------------ATATATRVASGR-GPPTPEKCSVAAPRMLAHMSSDDVALFAKYLVRTKRAVTEGGLLKVLFRGGGN------RVAAAGATVSETEKDLLRLRCTVASLEASASDLGLRIQRVQQDALMENRRGQKRAALVHLRRMKQYQAARDKRLSSLLTLETALDQVKQLRLDKQVLEAHEAATNALKACRETQGLTVERVEDTLDALAGEMAEAEAVGAALGQEGALLGQDEGETAELEAELDALLTAQD 439
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A1S3IJS9_LINUN (charged multivesicular body protein 7 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IJS9_LINUN) HSP 1 Score: 82.0 bits (201), Expect = 1.650e-12 Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 1126 ISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQ---DDVLFGHDDGERAGLEAELDALLRGED 1614
+SE + +LRLR + A L+ + + ++R +A +G K +A +RR K ++ + K+ ++L T++ L +++ DK ++EA+EA SALK R+ GLT+ RV+D +D L EE + I ALAQ D L D R+ LEAELDA+L GED
Sbjct: 239 VSEIDLGVLRLRESEAHLKGEVERVAEDVKRCVRDAKYYLSKGLKNSAKNSLRRKKAIEASLTKKENALETVQALLQKIQDAESDKMIVEAYEAGMSALKVKRDKDGLTIGRVDDIMDLLQEEYEKDADISLALAQGPADPSL----DISRSELEAELDAILAGED 400
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A4Q1B9S4_TREME (Uncharacterized protein n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1B9S4_TREME) HSP 1 Score: 72.8 bits (177), Expect = 1.890e-9 Identity = 58/211 (27.49%), Postives = 109/211 (51.66%), Query Frame = 1
Query: 976 RLDGRDMALLAKYLVRTKRA-VEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLEAELDALLR 1605
+L +DM +L K+L R V +G V+++ + GE +I+E +R L++ T+ ++ L + IQ Q +A + GQ+ A+ +R K L+ EKRL + L + Q + D +V+ A++ +TS L+ L++++VE+T +ALA +A+Q+ + A+A + + G + + LE EL+A++R
Sbjct: 242 KLSDQDMKVLLKWLERDCGVLVTDGEVIKILS-----------ENQIGE-SITEADRGTLQVLTTLRKVDEQVEKLEEEIQLCQEKAKKYLSSGQRTLAISRLRSKKALEDVLEKRLGAGEKLRAVVRSFDQAQTDVEVMAAYQTSTSTLRQLLSHPSLSLDKVEETTEALASALADQREVDDAMAIGEKILGQNAVDEDDLEKELEAMVR 440
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A7S2Y185_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y185_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 6.380e-8 Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = 1
Query: 1084 DGKMRPSAP------AGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGH--DDGERAGLEAEL 1590
DG M AP +G + + E +R L L CT+ + + L R+++ +SEA ++GQK AAL +R + ++ ++++ L L+ A V Q + +++AH+AAT AL++ +E GL+++ V+D LD++ EE+ E Q I LA L + DD E A + A +
Sbjct: 304 DGWMVKLAPPSKQGASGVLGVEEADRARLMLACTIHKTRSEVNRLHGRVEKERSEAKDWLKKGQKEAALARLRVCRLVEKGLSQQVAVLANLDQAWLAVGQALSTRDIVDAHKAATQALRSSKE--GLSLDDVDDILDSMQEEIDEHQEINERLASMVDLNSNPEDDEELAAIAASM 478
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A067CE52_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE52_SAPPC) HSP 1 Score: 66.2 bits (160), Expect = 1.600e-7 Identity = 62/215 (28.84%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 955 ATSRILSRLDGRDMALLAKYLVRTKRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLEAELDAL 1599
A ++ L+ + ++ +A YLV TKRAV + G++++ P A A +S+ +R +L L T+A++E+S + L R+ +AL R+G AL R K LQ ++R ++L L + Q+ + +L+ ++ A +L++ R + L+ E V +TL ++ M EQ+ + LA F DD A LE EL +L
Sbjct: 203 APAQFLAAVAADELDYIAWYLVYTKRAVVQPGLIKLIV----------PEATA---EVSDGDRTVLLLHHTIATVESSLASLQTRVATVTRKALEAKRRGSASEALALWRHAKTLQADVDQRQNALLNLLSTKHQLGAMSAQATILDGYKLAAESLRSVRASLHLSTEEVAETLADWSDVMDEQRDMDDLLAAHAADFTVDD---AALEMELLSL 401
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A507CWW0_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CWW0_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 1.810e-7 Identity = 60/211 (28.44%), Postives = 106/211 (50.24%), Query Frame = 1
Query: 985 GRDMALLAKYLVRTKRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMA-ISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERA----GLEAELDALL 1602
GRD++L LV + ++ +L + + K +P+ GE+ ISET++ +L ++ T+ L + S L R + + R ++ A +R+ K + KRL SL T+E L +++ D ++L +E T+ L+ GLTVE+V+ T+DAL + +A+Q+ + AA+ + G LEAELD+L+
Sbjct: 42 GRDLSLSDVMLVCRQLKMDVKLILDMTSSPETSIVKFKPTR--GELTPISETDKGILTIKTTLQHLNSQVSQLEDRSSQLLQQTKTFIRNKERIRAKFSLRQHKIVSDILAKRLQSLETVEAILHKLQSAETDAELLSVYEIGTTTLRDFVSEKGLTVEKVDKTMDALDDALADQREVEAAMNLGNQQIASTSGVATISDEDLEAELDSLI 250
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A1X7THW6_AMPQE (Doublecortin domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7THW6_AMPQE) HSP 1 Score: 65.9 bits (159), Expect = 1.990e-7 Identity = 54/169 (31.95%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 1102 SAPAGEMA-ISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLEAELDALLR 1605
++P+G+ +SE + +L + T+ ++ + + IQ+ + ++ R+GQK+ ALV MRRMK + L LET LDQ+K D ++LEA++ S L+ R GL VE E +D L + + E + I +A FG GLE + D LLR
Sbjct: 217 TSPSGKATPVSEIDVGILSIMRTITGMQKKIDNGNEEIQKLKGRSIGLVRKGQKKEALVLMRRMKVISRNVSNFEEKLTNLETVLDQIKSAETDIKILEAYKTGASVLRRLRVKEGLKVEDAEKIVDDLQDLLEEGENISDVVATQ---FG-------GLEIDEDDLLR 375
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A5M6C3Y8_9TREE (Uncharacterized protein n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C3Y8_9TREE) HSP 1 Score: 65.9 bits (159), Expect = 2.640e-7 Identity = 58/217 (26.73%), Postives = 107/217 (49.31%), Query Frame = 1
Query: 976 RLDGRDMALLAKYLVRT-KRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQD-DVLFGHD--DGERAGLEAELDALLRGED 1614
RL +D+ +L K+L R V +G V+++ + P + I+E +R + + + +E S + ++I ++ +A + QK AL ++R KQL+ KR+ S L + + Q + D +++ A+E +TS L L+++++ DT DALAE MA+Q+ I A+ +V G + + L AEL+ L+ E+
Sbjct: 233 RLSKKDVEVLIKWLERDCGLVVTDGKVIKI----------LEPGQEDTDHPINEADRGAVSVMNALRKIELQISSIEEQIAQSHEKAKKHLSLNQKTIALSYLRSKKQLEDLLAKRVGSSEQLRAVIRSIDQAKGDVEIMAAYETSTSTLTQVLSHPSLSLDKIADTTDALAEAMADQEEIDQAVRLGGEVAMGSKRVEVDEEDLAAELEGLVEEEE 439
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Match: A0A167NM73_CALVF (Uncharacterized protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167NM73_CALVF) HSP 1 Score: 65.1 bits (157), Expect = 3.850e-7 Identity = 55/203 (27.09%), Postives = 102/203 (50.25%), Query Frame = 1
Query: 979 LDGRDMALLAKYLVRTKRAVEEGGVLRVFAGGGGDDGKMRPSAPAGEMAISETERDLLRLRCTVASLEASASDLGQRIQRTQSEALRENRQGQKRAALVHMRRMKQLQGAREKRLSSLYTLETALDQVKQLRVDKQVLEAHEAATSALKACREAHGLTVERVEDTLDALAEEMAEQQAIGAALAQDDVLFGHDDGERAGLEAE 1587
L D +L K+L R +RA+ + F + P + I++ +R +L ++ + LE S++ +RI S+ + Q+ AL ++R +QL+ KR SSL TL+T L +++ D +V++A+E +++ L+ L ERV+ T++++AE +A+ + I A+ + G D AGLE +
Sbjct: 216 LSATDTKVLLKHLERDRRAIVTSNEIIKFLD------EHEPESTT----ITQVDRGVLEMKLAIQRLEEQISEIDRRITERTSKVKESLGKKQQETALSYLRSRRQLEEVLAKRTSSLETLQTVLLRIEAAAGDVEVMKAYETSSATLRTLLRDPRLQRERVDQTMESMAEALADHREIERAVE----MGGEDARAAAGLEID 404 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1226.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1226.1940.1 >prot_H-canaliculatus_F_contig1226.1940.1 ID=prot_H-canaliculatus_F_contig1226.1940.1|Name=mRNA_H-canaliculatus_F_contig1226.1940.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=582bp MSYSCPVCGASSSTVETAATCPLAADWADEERLEFLTSHVAPGDVNARDQback to top mRNA from alignment at H-canaliculatus_F_contig1226:18959..26172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1226.1940.1 ID=mRNA_H-canaliculatus_F_contig1226.1940.1|Name=mRNA_H-canaliculatus_F_contig1226.1940.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7214bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:18959..26172+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1226:18959..26172+ >mRNA_H-canaliculatus_F_contig1226.1940.1 ID=mRNA_H-canaliculatus_F_contig1226.1940.1|Name=mRNA_H-canaliculatus_F_contig1226.1940.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3492bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:18959..26172+ (Hapterophycus canaliculatus Oshoro5f female)back to top |