mRNA_H-canaliculatus_F_contig1226.1939.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: D7FJM2_ECTSI (GMP_PDE_delta domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM2_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.490e-69 Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFYD 336
DMY HELKATVPRRILECSAVSREINF+S+EEIR+FRLEQRVFLAGACIEEWFFDFGFVI GSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDG+TMLFKTLVR+FY+
Sbjct: 21 DMYHHELKATVPRRILECSAVSREINFTSQEEIRQFRLEQRVFLAGACIEEWFFDFGFVIPGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGRTMLFKTLVRIFYE 132
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A835Z4X9_9STRA (Delta subunit of GMP phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X9_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.570e-49 Identity = 76/110 (69.09%), Postives = 94/110 (85.45%), Query Frame = 1
Query: 4 MYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
M R E++A VP+ ILEC AVSRE+NF+S+EEIR+FRLEQR+FL GAC+EEWFFDFGFVI GSTNSWQQTIE+A + M +LSG++TIET+F DGKT++ KTLVR+FY
Sbjct: 22 MLREEMQARVPKEILECRAVSRELNFTSQEEIRQFRLEQRIFLRGACLEEWFFDFGFVIPGSTNSWQQTIEAAAPEDMRHPAELSGKVTIETSFYDGKTLIAKTLVRVFY 131
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A067D6C1_SAPPC (GMP_PDE_delta domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6C1_SAPPC) HSP 1 Score: 152 bits (385), Expect = 2.210e-44 Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFYD 336
DMY E +A VP+ IL+C AVSREINFSSKEEI+ FRLEQRVFL G C+EEW F FG+VI GSTNSWQQTIESAG D ML A+ +SG++TIET F D ++ KT+ R++Y+
Sbjct: 117 DMYEKEQRAVVPKAILQCLAVSREINFSSKEEIQNFRLEQRVFLHGKCLEEWLFAFGYVIPGSTNSWQQTIESAGADNMLPADVISGKITIETGFYDADMLIAKTVFRIYYE 228
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A5D6XY42_9STRA (GMP_PDE_delta domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY42_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.040e-44 Identity = 72/111 (64.86%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
D+Y E +A +P IL+CSAVSREINFSS EEI +FRLEQRVFLAG+CIEEW F+FG+VI GSTN+WQQTIESAG + ML E +SG++TIET F +G++ + KT+ R+FY
Sbjct: 116 DVYTAEQEARIPASILKCSAVSREINFSSAEEITQFRLEQRVFLAGSCIEEWLFEFGYVIPGSTNTWQQTIESAGAENMLDPESISGKLTIETAFYEGQSAIAKTVYRIFY 226
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A6A3LLC5_9STRA (GMP_PDE_delta domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LLC5_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.800e-43 Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
D+YR E KA +P IL+CSAVSREINFSS EEI +FRLEQRVFL G+CIEEW F+FG+VI GSTN+WQQTIESAG + ML E +SG++TIET F DG+ + KT+ R++Y
Sbjct: 105 DIYRVEQKARLPMDILKCSAVSREINFSSAEEISQFRLEQRVFLDGSCIEEWLFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 215
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: G4Z211_PHYSP (GMP_PDE_delta domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=G4Z211_PHYSP) HSP 1 Score: 149 bits (376), Expect = 3.720e-43 Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
D+YR E KA +P IL+CSAVSREINFSS EEI +FRLEQRVFL G+CIEEW F+FG+VI GSTN+WQQTIESAG + ML E +SG++TIET F DG+ + KT+ R++Y
Sbjct: 106 DIYRVEQKARLPVDILKCSAVSREINFSSAEEISQFRLEQRVFLDGSCIEEWLFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 216
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A8K1C6Q4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6Q4_PYTOL) HSP 1 Score: 147 bits (371), Expect = 2.380e-42 Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
D++ E +A +P IL+CSAVSRE+NFSS EEI +FRLEQRVF G+CIEEW F FGFVI GSTNSWQQTIESAG D ML E +SG++TIET F DG+ + KT+ R+FY
Sbjct: 110 DVFTVEQEAHIPSSILKCSAVSREVNFSSTEEITQFRLEQRVFFQGSCIEEWLFTFGFVIPGSTNSWQQTIESAGPDNMLDPEVMSGKLTIETGFYDGQMPIAKTVYRIFY 220
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: A0A024UHN0_9STRA (GMP_PDE_delta domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHN0_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.450e-42 Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFYD 336
DM+ E KA VP+ IL+CS+VSREINFSS EEI+ FRLEQRVF G C+EEW F FGFVI STN+WQQ+I++AG D ML+A+ +SG +TIET F D ++ KT+ R++YD
Sbjct: 120 DMFEREQKAVVPKAILQCSSVSREINFSSTEEIKAFRLEQRVFFNGQCLEEWLFSFGFVIPHSTNTWQQSIDAAGPDAMLSADVISGNLTIETAFYDASVLIAKTVYRIYYD 231
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: H3G6U4_PHYRM (GMP_PDE_delta domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6U4_PHYRM) HSP 1 Score: 141 bits (356), Expect = 1.370e-41 Identity = 69/103 (66.99%), Postives = 84/103 (81.55%), Query Frame = 1
Query: 25 ATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFY 333
A +P IL+CSAVSREINFSS EEI RFRLEQRVFL G+CIEEW F+FG+VI GSTN+WQQTIESAG + ML E +SG++TIET F DG+ + KT+ R++Y
Sbjct: 1 ARLPVDILKCSAVSREINFSSAEEISRFRLEQRVFLDGSCIEEWIFNFGYVIPGSTNTWQQTIESAGPENMLDPEMMSGKLTIETAFYDGQLPIAKTVYRIYY 103
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Match: W4H6L9_9STRA (GMP_PDE_delta domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6L9_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.650e-41 Identity = 68/112 (60.71%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 1 DMYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEWFFDFGFVIGGSTNSWQQTIESAGEDRMLAAEDLSGRMTIETTFLDGKTMLFKTLVRMFYD 336
DM+ E KA VP+ IL+C++VSREINFSS EEI+ FRLEQRVF G C+EEW F FGFVI STN+WQQTI++AG D ML A+ +SG +TIET F D ++ KT+ R++YD
Sbjct: 117 DMFEREQKAVVPKAILQCTSVSREINFSSTEEIKAFRLEQRVFFNGQCLEEWLFAFGFVIPHSTNTWQQTIDAAGPDAMLPADAISGNLTIETGFYDANVLIAKTVYRIYYD 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1226.1939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1226.1939.1 >prot_H-canaliculatus_F_contig1226.1939.1 ID=prot_H-canaliculatus_F_contig1226.1939.1|Name=mRNA_H-canaliculatus_F_contig1226.1939.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=112bp MYRHELKATVPRRILECSAVSREINFSSKEEIRRFRLEQRVFLAGACIEEback to top mRNA from alignment at H-canaliculatus_F_contig1226:14176..15655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1226.1939.1 ID=mRNA_H-canaliculatus_F_contig1226.1939.1|Name=mRNA_H-canaliculatus_F_contig1226.1939.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1480bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:14176..15655- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1226:14176..15655- >mRNA_H-canaliculatus_F_contig1226.1939.1 ID=mRNA_H-canaliculatus_F_contig1226.1939.1|Name=mRNA_H-canaliculatus_F_contig1226.1939.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=672bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:14176..15655- (Hapterophycus canaliculatus Oshoro5f female)back to top |