mRNA_H-canaliculatus_F_contig1224.1925.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1224.1925.1
Unique NamemRNA_H-canaliculatus_F_contig1224.1925.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A6H5L1Z2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z2_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 8.150e-145
Identity = 228/288 (79.17%), Postives = 252/288 (87.50%), Query Frame = 1 
Query:  553 FEGDDIDIYLPGGMGAGLRPGFKPRKSNR--PVMWSKAVSNNKRFRVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLEARCSRKESVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKPRNKTGEMTLGDHVSYLFGLLTKPFLGPVPPSRQLPGRSAASVENLFGPPG 1410
            FEGDDIDIYLPGGMGAGLRPG KPR+     PVMWSK V  +KR  VVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLL EQRQDLE+RCSR+ESVMFKAID  RRKD++VGFVEVSE SGSKYGMG+G+ +ADTRPVVSNLAVDPR +R G+GSALMEACEDLVKTW+F+EIILQVEEDN+AALAFYGGKGF  LFVD+AARRYDTSGFLLQNVRTSKLTMRKAL  SST   R+K+G+ ++ DHVS+LFG L+KPF    PPS++LP RS ASVE LFG PG
Sbjct:  113 FEGDDIDIYLPGGMGAGLRPGAKPRRKRPKPPVMWSKPVRGSKRLAVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLQEQRQDLESRCSRRESVMFKAIDI-RRKDAIVGFVEVSEISGSKYGMGAGIALADTRPVVSNLAVDPRVQRCGVGSALMEACEDLVKTWNFDEIILQVEEDNEAALAFYGGKGFEKLFVDKAARRYDTSGFLLQNVRTSKLTMRKAL-GSSTK--RSKSGD-SMADHVSHLFGFLSKPFAVRPPPSKRLPARSTASVETLFGRPG 395
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: D7FVP6_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP6_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.210e-138
Identity = 220/275 (80.00%), Postives = 239/275 (86.91%), Query Frame = 1 
Query:  592 MGAGLRPGFKPRKSNR--PVMWSKAVSNNKRFRVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLEARCSRKESVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKPRNKTGEMTLGDHVSYLFGLLTKPFLGPVPPSRQLPGRSAASVENLFGPPG 1410
            MGAGLRPG KPR+     PVMWSK V  +KR  VVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLE+RCSR+ESVMFKAIDT RRKD MVGFVEVSETSGSKYGMG+G+ +ADTRPVVSNLAVDPR RR G+GSALMEACEDLVKTW F+EIILQVEE N+AALAFYGGKGF  LFVD+AARRYDTSGFLLQNVRTSKLTMRKAL  SST   R+K+G+ +L DHVS LFG L+KPF+   PPS++LP RS ASVE LFG PG
Sbjct:    1 MGAGLRPGAKPRRKRPKPPVMWSKPVRGSKRLAVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLESRCSRRESVMFKAIDT-RRKDGMVGFVEVSETSGSKYGMGAGITLADTRPVVSNLAVDPRVRRCGVGSALMEACEDLVKTWSFDEIILQVEEANEAALAFYGGKGFKKLFVDKAARRYDTSGFLLQNVRTSKLTMRKAL-GSSTK--RSKSGD-SLADHVSQLFGFLSKPFVVRPPPSKRLPARSTASVETLFGRPG 270
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A6V1N6U1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6U1_HETAK)

HSP 1 Score: 171 bits (434), Expect = 2.060e-45
Identity = 99/191 (51.83%), Postives = 126/191 (65.97%), Query Frame = 1 
Query:  676 RFRVVLAGREDLDEAGALCIKVFFGQPDS---PWKAAQLRQLLHEQRQDLEARCSRKE-SVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKAL 1236
            +F V  A R+DL+    LC+ VFF    S   P K  Q  QL  EQ  DL +RC + E S MFKA+  +  K  +VGFVE+S  +G KYGMG GV + D RPV++NLAVD   RR GIG AL + C+D V+ W ++EI+LQVEEDN  A AFY   G+  LFVDRAARRY+  G  L+NVRT+K+TM+KA+
Sbjct:  102 KFEVKEATRKDLEAVTDLCVDVFFPNVASGANPLKGVQRAQLYKEQLSDLSSRCRKMELSNMFKAVSKQTGK--IVGFVEISVQAGYKYGMGDGVVLNDFRPVLTNLAVDLDCRRQGIGQALEQQCQDAVREWGYDEIVLQVEEDNAGARAFYRTLGYADLFVDRAARRYNAGGLWLRNVRTAKVTMQKAI 290
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A7S2DA34_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DA34_9STRA)

HSP 1 Score: 164 bits (415), Expect = 5.980e-44
Identity = 96/210 (45.71%), Postives = 128/210 (60.95%), Query Frame = 1 
Query:  610 PGFKPRKSNRPVMWSKAVSNNKRFRVVLAGREDLDEAGALCIKVFFGQPDSPWKAAQLRQLLHEQRQDLEARCSR-KESVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKAL 1236
            P   P     P+  S  VS+   F +V   R+DL+ A  LC++VFFG   S WK +QLR+L  EQ  DL  + +R  +S++FK  +     + ++GF E+S   G +  + S +PV D RPV+SNLAV    RR GIGS LM+ CE+  + W F E++LQVEEDN  A A Y   G+  LF DR ARRYDTSGF L+NVRT+K T+ K L
Sbjct:   14 PPAVPPSDLEPLRGS-TVSSRGDFNLVEVTRKDLEPAAKLCVQVFFGNDTSWWKQSQLRRLYAEQLLDLTDKFNRPSKSILFKVTEMDATGEIIIGFAELSMCRGLR--VCSTLPVLDERPVLSNLAVRENRRRRGIGSLLMQECENAAQRWGFTEVVLQVEEDNREARALYQALGYRELFTDRTARRYDTSGFFLRNVRTAKTTLSKPL 220
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A836C8B6_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B6_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.650e-38
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1 
Query:  934 MGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKPRNKTGEMTLGDHVSYLFGLLTKPFLGPVPPSR 1356
            MG  +P AD RPV+SNLAV PR RR GIGS+L++AC++ V +W ++E++LQVEEDN  A AFY   GF TLFVDRAARRYDTSGFLLQNVR SKLT+RK L  SS A+    + + +     ++    L +P    VPP R
Sbjct:    1 MGDNIPEADVRPVISNLAVSPRMRRFGIGSSLLKACQEEVLSWGYQELVLQVEEDNAGARAFYQRMGFDTLFVDRAARRYDTSGFLLQNVRCSKLTLRKLLPQSSGARVPQSSAQQSGMGLSAFFDRFLRRP---AVPPPR 138
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: K8Z711_NANGC (Gcn5-related n-acetyltransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z711_NANGC)

HSP 1 Score: 145 bits (367), Expect = 2.800e-36
Identity = 84/193 (43.52%), Postives = 120/193 (62.18%), Query Frame = 1 
Query:  700 REDLDEAGALCIKVFFGQPD--SPWKAAQLRQLLHEQRQDLEARCSRKE---SVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGS-GVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKP 1260
            R+DL  A ++CI+ FFG  D  +P ++ QL  LL EQ  DL +R   +    S+  +A+D      +MVGFVEV  T   KYGM   GVPV D RP ++NL+V P  RR G+G  L+ ACE++V+TW ++E+ILQVE+ N  A   Y   G+  L+ D   R+Y+ SG  ++NVR +K+T+RKAL+ S+   P
Sbjct:   88 RQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSLYLQAVDA---DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVRTWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNP 277
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A4D9CYN2_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.550e-34
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 1 
Query:  700 REDLDEAGALCIKVFFGQPD--SPWKAAQLRQLLHEQRQDLEARCSRKE---SVMFKAIDTRRRKDSMVGFVEVSETSGSKYGMGS-GVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKP 1260
            R+DL  A ++CI+ FFG  D  +P ++ QL  LL EQ  DL +R   +    SV  +A+D      +MVGFVEV  T   KYGM   GVPV D RP ++NL+V P +RR G+G  L+ ACE++V++W ++E+ILQVE+ N  A   Y   G+  L+ D   R+Y+ SG  ++NVR +K+T+RKAL+ S+   P
Sbjct:  333 RQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSVYLQAVDA---DGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPASRRQGVGRRLVHACEEMVRSWGYDELILQVEDSNQHARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVPSAAKNP 522
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A7S2V3S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3S6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.240e-27
Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1 
Query:  940 SGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDLVKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRK 1230
            SG  V D RPV++NLAV+   RR G+G AL+ +CE  V+ W + EI+LQVEE+N+AA  FY   GF TLFVD+AARRYDT+G  L+NVRT+K+ M+K
Sbjct:    1 SGSKVQDFRPVLANLAVNSDVRRRGVGRALVRSCESRVQEWGYSEIVLQVEEENEAARLFYQNLGFDTLFVDKAARRYDTTGLFLRNVRTTKICMQK 97
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: A0A6U2A6T8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2A6T8_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.080e-22
Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 1 
Query:  964 RPVVSNLAVDPRARRSGIGSALMEACEDLVKTW---HFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKALLDSSTAKPRNKTG 1275
            RP +SNL+V   ARRSG+GSAL+E+CE+ V  W    + EI+LQVE+DN  A  FY  +G+  LF D A RR+DT+GFLL+ V T+K+ MRK L  S T   R K G
Sbjct:    2 RPFLSNLSVREDARRSGVGSALVESCEEAVLVWPGKDYTEIVLQVEKDNPMAQQFYEKRGYDVLFADPACRRFDTTGFLLKQVPTTKVAMRKDLTKSRTTG-RRKVG 107
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BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Match: B8BUN3_THAPS (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUN3_THAPS)

HSP 1 Score: 108 bits (270), Expect = 2.910e-22
Identity = 86/263 (32.70%), Postives = 121/263 (46.01%), Query Frame = 1 
Query:  610 PGFKPRKSNRPVMWSKAVSNNKRFRVVLAGR---EDLDEAGALCIKVFFGQPDS-----------PWKAAQLRQLLHEQRQDLEARCSRKESVMFKAIDTRR------RKDSM----------------------------VGFVEVSETSGSKYGMGSGVPVADT----RPVVSNLAVDPRARRSGIGSALMEACEDLVKTWH--FEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQNVRTSKLTMRKAL 1236
            P  K   +N P +   +  N   F +   GR    +L E   LCI VFF + ++           PWK+ QL  L   Q  DL AR + K++     I  RR      + D M                            +G+ EVSE     +G+G       +    RP +SNL+V   AR+SG+GS L++ACE+ V  W+  + EI+LQVEEDN +A+ FY  +G+  +F D   RRYDTSG  L+  R +K  M K L
Sbjct:   67 PWNKNEANNNPPLPIPSSDNRVPFIIERIGRGTESELKEISRLCIDVFFNKQENVEGLASNKQVAPWKSVQLAYLRTYQYGDLMARNAFKQNEQVDLIVARRVYPIKQQTDKMKMVDASQIYNLGQTSAKRNAQQFAAGEIIGYAEVSEKI---FGLGGKFETRSSEEKLRPYLSNLSVVEYARQSGVGSKLLDACEEAVLNWNATYSEIVLQVEEDNTSAIKFYKRRGWEFVFADPTCRRYDTSGLFLKETRITKYAMLKRL 326
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1224.1925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1Z2_9PHAE8.150e-14579.17N-acetyltransferase domain-containing protein n=1 ... [more]
D7FVP6_ECTSI1.210e-13880.00N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6V1N6U1_HETAK2.060e-4551.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DA34_9STRA5.980e-4445.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836C8B6_9STRA5.650e-3855.32N-acetyltransferase domain-containing protein n=1 ... [more]
K8Z711_NANGC2.800e-3643.52Gcn5-related n-acetyltransferase n=2 Tax=Nannochlo... [more]
A0A4D9CYN2_9STRA2.550e-3443.52N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2V3S6_9STRA4.240e-2757.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U2A6T8_9STRA1.080e-2252.34Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
B8BUN3_THAPS2.910e-2232.70N-acetyltransferase domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1224contigH-canaliculatus_F_contig1224:14247..18659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.8
Seed ortholog evalue1.5e-113
Seed eggNOG ortholog2880.D7FVP6
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs2E4IJ@1,2SBET@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1536
Cds size1536
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1224.1925.1prot_H-canaliculatus_F_contig1224.1925.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1224 14247..18659 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928940.4862938-CDS-H-canaliculatus_F_contig1224:14246..145521622928940.4862938-CDS-H-canaliculatus_F_contig1224:14246..14552Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 14247..14552 -
1696845620.6483433-CDS-H-canaliculatus_F_contig1224:14246..145521696845620.6483433-CDS-H-canaliculatus_F_contig1224:14246..14552Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 14247..14552 -
1622928940.4987235-CDS-H-canaliculatus_F_contig1224:15323..154671622928940.4987235-CDS-H-canaliculatus_F_contig1224:15323..15467Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 15324..15467 -
1696845620.6587312-CDS-H-canaliculatus_F_contig1224:15323..154671696845620.6587312-CDS-H-canaliculatus_F_contig1224:15323..15467Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 15324..15467 -
1622928940.512417-CDS-H-canaliculatus_F_contig1224:16385..166021622928940.512417-CDS-H-canaliculatus_F_contig1224:16385..16602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 16386..16602 -
1696845620.666918-CDS-H-canaliculatus_F_contig1224:16385..166021696845620.666918-CDS-H-canaliculatus_F_contig1224:16385..16602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 16386..16602 -
1622928940.523774-CDS-H-canaliculatus_F_contig1224:17790..186591622928940.523774-CDS-H-canaliculatus_F_contig1224:17790..18659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 17791..18659 -
1696845620.675833-CDS-H-canaliculatus_F_contig1224:17790..186591696845620.675833-CDS-H-canaliculatus_F_contig1224:17790..18659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 17791..18659 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1224.1925.1

>prot_H-canaliculatus_F_contig1224.1925.1 ID=prot_H-canaliculatus_F_contig1224.1925.1|Name=mRNA_H-canaliculatus_F_contig1224.1925.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=512bp
PAAAAAAGADRLAFVASSVRSRPSVCSSSSSFASPCTAWKNGLPQQPQQL
QQQQQQQQQQQQRSQTPRRFQRPRCRRGWACPVALSAAAAAGAGSPPAFP
SSGRRRRSRTNRPQQHHTVFAVSSGIQESLECASGRSSSQQGGDPFHRHS
AVGGYAAMLQPEEEAEGEEPEEREEEDFDGYDPDFEGDDIDIYLPGGMGA
GLRPGFKPRKSNRPVMWSKAVSNNKRFRVVLAGREDLDEAGALCIKVFFG
QPDSPWKAAQLRQLLHEQRQDLEARCSRKESVMFKAIDTRRRKDSMVGFV
EVSETSGSKYGMGSGVPVADTRPVVSNLAVDPRARRSGIGSALMEACEDL
VKTWHFEEIILQVEEDNDAALAFYGGKGFHTLFVDRAARRYDTSGFLLQN
VRTSKLTMRKALLDSSTAKPRNKTGEMTLGDHVSYLFGLLTKPFLGPVPP
SRQLPGRSAASVENLFGPPGGSGGSGVRRRRSGGGARSASSSGGRVGSGS
SRSRGSDDGGGG
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mRNA from alignment at H-canaliculatus_F_contig1224:14247..18659-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1224.1925.1 ID=mRNA_H-canaliculatus_F_contig1224.1925.1|Name=mRNA_H-canaliculatus_F_contig1224.1925.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4413bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:14247..18659- (Hapterophycus canaliculatus Oshoro5f female)
CCCGCCGCCGCCGCTGCTGCGGGTGCAGATCGTCTCGCGTTCGTTGCGTC
GTCGGTGCGCTCTCGCCCCTCCGTCTGCTCGTCCTCGTCGTCCTTCGCGT
CTCCATGCACCGCATGGAAGAACGGCTTGCCACAGCAACCGCAACAGCTG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACGGTCGCAAACTCC
ACGACGGTTTCAACGGCCCCGGTGCAGGCGCGGCTGGGCATGCCCGGTGG
CACTGTCGGCGGCGGCGGCGGCGGGGGCCGGGTCGCCCCCGGCGTTCCCG
TCGTCGGGACGGCGACGGCGATCTCGAACGAACCGGCCCCAACAGCACCA
CACCGTCTTCGCCGTATCATCGGGGATACAGGAATCCCTTGAGTGCGCCT
CGGGCCGCTCGTCCTCTCAGCAGGGGGGTGACCCTTTCCACCGCCACTCG
GCGGTAGGAGGGTACGCCGCGATGCTGCAGCCGGAGGAGGAGGCAGAGGG
AGAGGAACCAGAGGAACGAGAGGAGGAAGACTTTGACGGCTACGATCCAG
ATTTCGAGGGCGACGACATCGACATCTACCTCCCAGGAGGGATGGGCGCG
GGGCTTCGACCCGGGTTCAAGCCGAGGAAGTCCAACCGCCCCGTGATGTG
GTCCAAGGCGGTGAGCAATAACAAGAGGTTTCGAGTTGTGCTCGCCGGGA
GGGAGGATCTGGACGAGGCAGGGGCGCTCTGCATAAAGGTCTTCTTCGGG
CAGCCGGATAGCCCCTGGAAGGCGGCGCAGCTGAGGCAGCTCTTGCACGA
GCAGAGACAGGACCTCGAGGCCAGGTGCAGCCGCAAGGAGAGCGTCATGT
TCAAGGCGATCGACACTAGGTGAGGAGCGCCTCGCGTGCACCTTTCGCCC
GATTCCGTGGGTGTTTTGCCTCGTTCGCGCTTTGCTGTTATGCTGTTAGC
ATGAAGTGCGCCAGGTAGTCATCCTGCCAACTGTTGGGGTCCTAGTCGGC
GCGACACTGTTACACATGCGAGCGAGCGCGCGCGTGTTTGTGTGGATTCC
GGTTCTTACACATGTGGTGTTATTCGTTGCCCTTTGTGCGCTGACGGCGG
CGTGACTGTGTCATGGCCTGGCCACTCAGCTCTTGTCGGACAGAGGTAGG
ACAAGACGAAGGATTGCCCACTCGCCAGGAGAGTTGTATCCTTGCACATA
ATGGCGAACGTCATGAAACAGCCGTGGGTTTATAGCCTAGAGAGGACGCA
CGGCGGTTGATCCGCGTACTCGTGGTGTCTCGTCGAAAAGTGCACGCCGC
AGGAGGGCCTGTCGCTGCTCGCCTAGGCAAGCCTCGCATCGGAGCGTCTC
TCTCGTGTCCATCCAAATCGCTTCGATGCCCAGAGGAATTTGAAGCGAAA
TGTCAATATTTCCCGAAAGTCATCGAGAGCAAGCCTCTCCGTGCGAAATC
TGCTCATCTGCCTCGCAACATCTGAGGAGACGGTCATTTACCGTGAGATG
GTAATGTGAGCGATGTATTTCAGCACCTCTCTCTCCGTTGTGCTACATGC
TCATGGGGGTGGAACAATACACCTGTAGTGTTCTTCATCCGAAGGACGGC
GCCATCGCCCTTCGAATGGAACTCCCGATGCACTCGCAACGAATGGCGAG
ATGGTGCGGACCCGTTCTTCGCCGAACGCACCCCTGACGATAACGACACG
CCAAGCTACCCATCTGTCCCTTCCCCCTCAAGCCTAGTGCTGGAGACAGA
TCCCCCCCCCGATCTATACTCCGCCGTGACTTCCGTTTAGCTCGCTCCCA
AAGACGCAGATACTCGCCTCGACCGTGTTCGCCGACCCCACGTCTGCCTA
CCCGTCAGTCCGCCCGTCCGCCCGTCGCAGCTTGATCCACGATCGACTCC
TTTTGAGACAGAAGCAAGGAACGAAGTTATCAACCGGCCGCACCTCCGGA
ACCGATCTTGAGGTTTGATGTCCCATCATGCTTGTTCGTCGAAGGACAGC
ATTTGTCCGTTTCTAAGGTTTCCCTTCGATCGTTTTTCGTTCGTGGTTCC
TCTCTAGAAGGCGCAAAGACTCGATGGTCGGATTCGTCGAGGTGTCGGAG
ACGTCCGGCTCCAAGTACGGCATGGGGAGCGGGGTCCCCGTGGCGGACAC
ACGGCCAGTGGTCTCCAACCTCGCTGTCGACCCGCGGGCGCGGCGTTCCG
GCATAGGCTCGGCCCTCATGGAGGCTTGCGAAGACTTGGTCAAGACCTGG
CACTTCGAGGAGATTATCCTGCAGGTGGGTGGGTGGGTCGGGAAGAGGGG
CACAGGGGGGGTCGGGAGCGGGGAGCAGAGAAACATAGGAGATGGGTTTT
ACTAGCATAGGTAGGCGGGGTACATGTCAAAGCCTGTCAAGCGAGAGCAA
ATGCACGAGGTGGAAGCTAGCAGGCGGCGGCGAAGAGTCCAGGCGAGACT
TTTTGTTCGGAAAAACAAAACGACTTTTGGTCGTACCACGATGGGTTGAT
CGGCGGCTGAGCGGCAGGTGTCGCATGGAACAAGGTTCGAGTCCAGCCGT
GCGGGTTGGTGGGGACTGACCCGGTGGACGAGACGCCAGCCTCTCCAAGC
CTCGCTCCCGGTATCTGCGAAGACTTGCGTGCCGGATACGTGTTGCGTAT
ACGGAGGTTGAATGGTCCGTTCTCTGCGACTCGACGCCCCTCACCGCCCC
TACTCCCCGGTTGTGGCCTCGTCTTGCCGAGGGGCGATGAGCTGGAGCCA
AGACTAGTGTATGGTGTGGGCCACAGATCTCGAATCGTCACGGACAGGGT
CGTGTGTCTATCATTCGGAACATTTTTGTAGTGCCCGGCGCAGCTGCATG
CACCAGTTCTCTTTGCGCGTTCAGTACGGCGCCTGCAAAGCGCACTCGTG
ATTTCGAGTCGGCGTTCTCGGTCCCCCGGCGGGCGTGTATCTTAGCACGA
CTCGCGGGGCCCCCTCGTCCAGAGTTGGCATGCGGTGCTTTCCGCGGAGA
CGGCGATGGTCGTATCGACGCCGAGATTTTCGTCGCTTGTCGTGAGCCAA
GTGTCGTTGCGTCGCGGAGGCGTTCTTCTTGTTTCGGTGCTGTTGTCGAC
GTCTTCCCCCCCCTCCCCTCCCTTCCCTTCCTTCCCGATCCTTCTCCGGG
CTCCGCGTGCGTTTTCTCTACACCCCGAACGAACGGATGAAGGTGGAAGA
GGACAACGACGCGGCCCTGGCGTTTTACGGCGGTAAGGGTTTCCACACGC
TCTTCGTCGACAGGGCCGCTCGCCGTTACGACACCAGCGGCTTCCTGCTG
CAAAACGTCCGGACGTCCAAGCTGACCATGCGGAAGGTGGGCCTAGTCCG
ACGAGTGTGTATCTCGGAAATAATCGGGGAGGAAGAGGCACGGGTGGAGA
TCGCAACCCACCGTGACTCGGTCGCCGATTCTCCTTTGGGTAGACACCGA
CGTGTACGAATAGGCGGTTTTCTTGCATCTTTCACGTACATAAAAAATCG
AAGTAGCAGTTTGTTGACTAGTCAGTGGACGAATACGCGGAGCTAGTGCC
GTTGTGCCTGTCATCGGCTGTTGGCATATCGTTCTCGTTCTGGTCTTGTG
GACGGATTACATTTTAGGTAGATCGACGGGCACGGCTCGACTTGTCTCCC
TCTCCCGAGAGGAAGGATCAGACACCTGCTGGTGGTGTGCATCGATTTGC
GCGAGACATCTAGTTGTACGTGTTGATTGTCATTTGTTCAGGCGGTTTTC
ATTCCGGTCTTCCAGTGGCGCACCAACCCTCGACTGTTGATGCTTCAGAG
TAGTGTTTTCGTGCAGCTCAATGACCTTTCTCTGGTACCACCGATCTCCA
CGAAGGCACTTGAGGCGAGACAGCTGCTGCTGATTGTTCATGTGCCGCAC
ATGCTGCAAACCACTTCCAAGTTTCCTATCGACTCTTCGAAAGAAATGAG
AGACCCGAACCCTGCCGACTCCTTACCCCACCCGTCCGCCCATGCACATT
TCAACGCAACCTCGTTCTTCCCTATCCCCGACCCTGACCCCCCCCCGCGC
AACGAAAATGAACCACGTCGCACCGTACTACACCACGGCGCGGTGTCGTG
ATGGCAGGCGTTGCTAGATTCGAGCACGGCGAAGCCGCGCAACAAGACCG
GAGAAATGACGCTCGGAGACCACGTGTCTTACTTGTTCGGACTCCTCACG
AAGCCGTTCTTGGGGCCGGTGCCACCTTCCAGGCAGCTCCCGGGGCGATC
GGCGGCCTCGGTGGAAAACCTCTTCGGCCCGCCCGGTGGCAGCGGGGGGA
GCGGTGTCCGTCGTCGGAGAAGCGGCGGCGGGGCGCGGAGCGCAAGTAGC
AGCGGCGGCCGAGTCGGCAGCGGCAGTAGCCGTAGTCGCGGCAGCGATGA
CGGTGGAGGTGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1224:14247..18659-

>mRNA_H-canaliculatus_F_contig1224.1925.1 ID=mRNA_H-canaliculatus_F_contig1224.1925.1|Name=mRNA_H-canaliculatus_F_contig1224.1925.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3072bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:14247..18659- (Hapterophycus canaliculatus Oshoro5f female)
CCCGCCGCCGCCGCTGCTGCGGGTGCAGATCGTCTCGCGTTCGTTGCGTC
GTCGGTGCGCTCTCGCCCCTCCGTCTGCTCGTCCTCGTCGTCCTTCGCGT
CTCCATGCACCGCATGGAAGAACGGCTTGCCACAGCAACCGCAACAGCTG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACGGTCGCAAACTCC
ACGACGGTTTCAACGGCCCCGGTGCAGGCGCGGCTGGGCATGCCCGGTGG
CACTGTCGGCGGCGGCGGCGGCGGGGGCCGGGTCGCCCCCGGCGTTCCCG
TCGTCGGGACGGCGACGGCGATCTCGAACGAACCGGCCCCAACAGCACCA
CACCGTCTTCGCCGTATCATCGGGGATACAGGAATCCCTTGAGTGCGCCT
CGGGCCGCTCGTCCTCTCAGCAGGGGGGTGACCCTTTCCACCGCCACTCG
GCGGTAGGAGGGTACGCCGCGATGCTGCAGCCGGAGGAGGAGGCAGAGGG
AGAGGAACCAGAGGAACGAGAGGAGGAAGACTTTGACGGCTACGATCCAG
ATTTCGAGGGCGACGACATCGACATCTACCTCCCAGGAGGGATGGGCGCG
GGGCTTCGACCCGGGTTCAAGCCGAGGAAGTCCAACCGCCCCGTGATGTG
GTCCAAGGCGGTGAGCAATAACAAGAGGTTTCGAGTTGTGCTCGCCGGGA
GGGAGGATCTGGACGAGGCAGGGGCGCTCTGCATAAAGGTCTTCTTCGGG
CAGCCGGATAGCCCCTGGAAGGCGGCGCAGCTGAGGCAGCTCTTGCACGA
GCAGAGACAGGACCTCGAGGCCAGGTGCAGCCGCAAGGAGAGCGTCATGT
TCAAGGCGATCGACACTAGCCCGCCGCCGCCGCTGCTGCGGGTGCAGATC
GTCTCGCGTTCGTTGCGTCGTCGGTGCGCTCTCGCCCCTCCGTCTGCTCG
TCCTCGTCGTCCTTCGCGTCTCCATGCACCGCATGGAAGAACGGCTTGCC
ACAGCAACCGCAACAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAC
AACAACGGTCGCAAACTCCACGACGGTTTCAACGGCCCCGGTGCAGGCGC
GGCTGGGCATGCCCGGTGGCACTGTCGGCGGCGGCGGCGGCGGGGGCCGG
GTCGCCCCCGGCGTTCCCGTCGTCGGGACGGCGACGGCGATCTCGAACGA
ACCGGCCCCAACAGCACCACACCGTCTTCGCCGTATCATCGGGGATACAG
GAATCCCTTGAGTGCGCCTCGGGCCGCTCGTCCTCTCAGCAGGGGGGTGA
CCCTTTCCACCGCCACTCGGCGGTAGGAGGGTACGCCGCGATGCTGCAGC
CGGAGGAGGAGGCAGAGGGAGAGGAACCAGAGGAACGAGAGGAGGAAGAC
TTTGACGGCTACGATCCAGATTTCGAGGGCGACGACATCGACATCTACCT
CCCAGGAGGGATGGGCGCGGGGCTTCGACCCGGGTTCAAGCCGAGGAAGT
CCAACCGCCCCGTGATGTGGTCCAAGGCGGTGAGCAATAACAAGAGGTTT
CGAGTTGTGCTCGCCGGGAGGGAGGATCTGGACGAGGCAGGGGCGCTCTG
CATAAAGGTCTTCTTCGGGCAGCCGGATAGCCCCTGGAAGGCGGCGCAGC
TGAGGCAGCTCTTGCACGAGCAGAGACAGGACCTCGAGGCCAGGTGCAGC
CGCAAGGAGAGCGTCATGTTCAAGGCGATCGACACTAGAAGGCGCAAAGA
CTCGATGGTCGGATTCGTCGAGGTGTCGGAGACGTCCGGCTCCAAGTACG
GCATGGGGAGCGGGGTCCCCGTGGCGGACACACGGCCAGTGGTCTCCAAC
CTCGCTGTCGACCCGCGGGCGCGGCGTTCCGGCATAGGCTCGGCCCTCAT
GGAGGCTTGCGAAGACTTGGTCAAGACCTGGCACTTCGAGGAGATTATCC
TGCAGAAGGCGCAAAGACTCGATGGTCGGATTCGTCGAGGTGTCGGAGAC
GTCCGGCTCCAAGTACGGCATGGGGAGCGGGGTCCCCGTGGCGGACACAC
GGCCAGTGGTCTCCAACCTCGCTGTCGACCCGCGGGCGCGGCGTTCCGGC
ATAGGCTCGGCCCTCATGGAGGCTTGCGAAGACTTGGTCAAGACCTGGCA
CTTCGAGGAGATTATCCTGCAGGTGGAAGAGGACAACGACGCGGCCCTGG
CGTTTTACGGCGGTAAGGGTTTCCACACGCTCTTCGTCGACAGGGCCGCT
CGCCGTTACGACACCAGCGGCTTCCTGCTGCAAAACGTCCGGACGTCCAA
GCTGACCATGCGGAAGGTGGAAGAGGACAACGACGCGGCCCTGGCGTTTT
ACGGCGGTAAGGGTTTCCACACGCTCTTCGTCGACAGGGCCGCTCGCCGT
TACGACACCAGCGGCTTCCTGCTGCAAAACGTCCGGACGTCCAAGCTGAC
CATGCGGAAGGCGTTGCTAGATTCGAGCACGGCGAAGCCGCGCAACAAGA
CCGGAGAAATGACGCTCGGAGACCACGTGTCTTACTTGTTCGGACTCCTC
ACGAAGCCGTTCTTGGGGCCGGTGCCACCTTCCAGGCAGCTCCCGGGGCG
ATCGGCGGCCTCGGTGGAAAACCTCTTCGGCCCGCCCGGTGGCAGCGGGG
GGAGCGGTGTCCGTCGTCGGAGAAGCGGCGGCGGGGCGCGGAGCGCAAGT
AGCAGCGGCGGCCGAGTCGGCAGCGGCAGTAGCCGTAGTCGCGGCAGCGA
TGACGGTGGAGGTGGTGCGTTGCTAGATTCGAGCACGGCGAAGCCGCGCA
ACAAGACCGGAGAAATGACGCTCGGAGACCACGTGTCTTACTTGTTCGGA
CTCCTCACGAAGCCGTTCTTGGGGCCGGTGCCACCTTCCAGGCAGCTCCC
GGGGCGATCGGCGGCCTCGGTGGAAAACCTCTTCGGCCCGCCCGGTGGCA
GCGGGGGGAGCGGTGTCCGTCGTCGGAGAAGCGGCGGCGGGGCGCGGAGC
GCAAGTAGCAGCGGCGGCCGAGTCGGCAGCGGCAGTAGCCGTAGTCGCGG
CAGCGATGACGGTGGAGGTGGT
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