mRNA_H-canaliculatus_F_contig1224.1922.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1224.1922.1
Unique NamemRNA_H-canaliculatus_F_contig1224.1922.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: D7FVP4_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVP4_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 1.120e-152
Identity = 252/391 (64.45%), Postives = 287/391 (73.40%), Query Frame = 2 
Query:   29 MLLNLGGTPISPNTAVYPLPPVLWSSPASTVSSPLCLSHFSITTRTSSNSRRRRTRPNSAP-GPTLLHPSGSGPEGVPSSLFKFQPRPTPKKKPQQAPAGGGGRAVATS--VIAERDALYAGLVEESDLPDVSALLVEVFEPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDRSSDALVLAVRDRSSV-GANPSPATPQDGGNGDVDGGES----TGEIVAVVELTIRQPDGKLPYNWPFPAPWRRA------------KPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVWMRKLLQLPTIRYQVKEFKGRKGATSPSAAAGI 1141
            MLL +GG  +S    ++PL   L S  A T++ P   +  +  T T   +RR++TRPNSA  GP LLHP GSGP+GVPSSLF FQPR TPKK PQ+    GG  A  +S  V  E + L AGL++ESDLPDVSALLVEVFEPGVVLADGEF+ LE V+LGAP+ MTNNYMKAVAYNEILYSL+SRCG RL  G+FDRSSDALVLAVR   S  G + S    QDG   D DGG        E+VAVVELTIR+PDG LP NWPFPAPWRR             KPP++WQPYM NLAVA++YR NGYGKQLVRLCEHVAKN WGYERMYLHVD+GDPAATGLYSSMGY+ IEKYDAP+WMRKL   PTIRYQVK FKGRKGA + +AA  +
Sbjct:    1 MLLTVGGPLVSAYATLHPL---LLS--AGTLNPPGQHTGTTSITATGDCTRRQQTRPNSASSGPRLLHPRGSGPDGVPSSLFTFQPRTTPKKYPQEKKRAGGDSASTSSAPVAGEENVLRAGLMDESDLPDVSALLVEVFEPGVVLADGEFTGLESVILGAPIDMTNNYMKAVAYNEILYSLRSRCGNRLTRGDFDRSSDALVLAVRGPPSTSGKSSSTPVTQDG---DADGGVGXXXXAAELVAVVELTIRKPDGSLPLNWPFPAPWRREARDLIVPLLYIEKPPEQWQPYMCNLAVAEEYRGNGYGKQLVRLCEHVAKNSWGYERMYLHVDLGDPAATGLYSSMGYEGIEKYDAPLWMRKLFGWPTIRYQVKRFKGRKGAPALAAAEAV 383
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BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A6H5KVK2_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK2_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 3.240e-90
Identity = 182/348 (52.30%), Postives = 212/348 (60.92%), Query Frame = 2 
Query:  194 RPNSAP-GPTLLHPSGSGPEGVPSSLFKFQP-RPTPKKKPQQAPAG------------GGGR---AVATSVIAERD--ALYAGLVEESDLPDVSALLVEVFEPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYN-----------------------EILYSLKSRCGKRLEGGNFDRSSDALVLAVRD-RSSVGANPSPATPQDGGNGDVD-GGESTGEIVAVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVWMRKLLQLPTIRYQVKEFKGR 1105
            RP+SA  GP LLHPSGSGPEGVPSSLF FQP R TP ++P +   G            G GR   AV T  +A  D  AL+  LVEESDLPDVSALL EVFEP +++   E      V     L   N Y+K +AY                        +IL S+KSRCGKRL  G+F  +SDALVLAVRD R +  A  + A P+ GG+G  D GG   G+IVAVVEL +RQPDG  P N PF        P   W+PYM NLAVA+KYR NGYGKQLVRLCE VAK HWGYERMYLHVD   PAAT LYSSMGY+ +E++  P W++KLL L  I YQVK F  +
Sbjct:   63 RPSSASSGPRLLHPSGSGPEGVPSSLFTFQPPRATPIERPTEVAPGTTEGGHNSGSEDGAGRSAAAVITKAVASADEEALHVKLVEESDLPDVSALLAEVFEPNILIDPAELRSESSV---ERLEKANKYLKEMAYKKVGGTHPREERECPLVVWSDTSCQILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDAGGGDAGDIVAVVELCLRQPDGWFPINGPFV-------PMTGWEPYMCNLAVAEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVKHFNAK 400
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: D7FVP3_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP3_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 9.230e-64
Identity = 116/192 (60.42%), Postives = 136/192 (70.83%), Query Frame = 2 
Query:  536 VAYNEILYSLKSRCGKRLEGGNFDRSSDALVLAVRD-RSSVGANPSPATPQDGGNGDVDGGES-TGEIVAVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVWMRKLLQLPTIRYQVKEFKGR 1105
            +AY +IL S+KSRCGKRL  G+F  +SDALVLAVRD R +  A  + A P+ GG+G  DGG    G+IVAVVEL +RQPDG LP N PF        P   W+PYM NLAV +KYR NGYGKQLVRLCE VAK HWGYERMYLHVD   PAAT LYSSMGY+ +E++  P W++KLL L  I YQVK F  +
Sbjct:    1 MAYKKILRSIKSRCGKRLTRGDFALTSDALVLAVRDSRPNGSARATSAVPELGGDGAGDGGGGDAGDIVAVVELCLRQPDGWLPINGPFV-------PMTGWEPYMCNLAVTEKYRGNGYGKQLVRLCEGVAKKHWGYERMYLHVDAASPAATSLYSSMGYEIMEQFQPPSWVKKLLGLRDILYQVKHFNAK 185
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BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A836CNC1_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNC1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.010e-39
Identity = 91/250 (36.40%), Postives = 129/250 (51.60%), Query Frame = 2 
Query:  374 LYAGLVEESDLPDVSALLVEVFEPGVVLA-DGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDRSSDALVLAVRDRSSVGANPSPATPQDGGNGDVDGGESTGEIVAVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYK-SIEKYDAPVWMRKLLQLPTIRYQVKEFKGRKGAT 1117
            L  GL+E+ D+   + LLV  F   V L+ +  F + E  VL  P+G+ N Y++  +Y EIL  +K R G++L     D S  A++L V D                         ST +I+AVVEL +R PDG LP NWP P   +        +PY+ NLAV++++R  G GKQLVRL EH+ +N W    +YLHVD  +  A  LY SMGY+ +   +  P W+  LL +P + Y  K  +G    T
Sbjct:   27 LVLGLIEDRDVAQAAELLVNCFPFEVSLSTEAGFKEWEVQVLRIPVGLMNAYLRGFSYYEILLGIKLRMGEQLLNPQIDASGSAMILGVAD------------------------PSTNQIIAVVELELRIPDGTLPGNWPLPRFIKGQSAESHSEPYLCNLAVSERWRGQGIGKQLVRLSEHIVRNCWAGSCLYLHVDPSNEIALQLYQSMGYRPAAPTHTLPPWLLSLLAVPQVTYFSKSLRGADAKT 252
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A7S0AJY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AJY5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.500e-25
Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 2 
Query:  383 GLVEESDLPDVSALLVEVFEPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDR---SSDALVLAVRDRSSVGANPSPATPQDGGNGDVDGGESTGEIVAVVELTIRQPDGKLPYNWPF-PAPWRRAKPP---------QKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYK 1015
            G+ EE DLPD+S L ++ F    +   G+ S  E  +L   + + N Y    AY E+L  L+SR   +LE  +      + D + +   D   + AN S       G    +G   T + +A VEL ++  D K+P++ P+  +  RRA               QPY+ NL VA+  R    GK LVR  E +A + WGYE++YLHVD+ + AA  LY S GY+
Sbjct:   68 GIAEEDDLPDISRLTIDAFGDVAITLGGDLSSFERAILSPGVALWNGYTGYAAYTEVLSGLRSRMKDKLEKVDLASPLVAKDGVDMPEEDSEQLAANSSLILAL--GRPKPEGEPGTIDAIATVELRLQPTDAKIPFSQPWVDSVERRAAKALGVDGPARDDTLQPYLSNLCVAESARGRRIGKALVRCLERIACDTWGYEKIYLHVDLENAAAYNLYKSEGYQ 289
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A448ZI05_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI05_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.320e-20
Identity = 69/240 (28.75%), Postives = 103/240 (42.92%), Query Frame = 2 
Query:  383 GLVEESDLPDVSALLVEVFEPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDRSSDALVLAVRDRSSVGANPSPATPQDG------GNGDVDGGESTGEIVAVVELTIRQPDGKLPYNWPFPAPWRR-------------AKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVW 1045
            GLVEE +LPD+   ++  F    +    + +  E ++L       N Y   VA+ E+    K R   R     F  +   + ++  D   +         +        G    D   S  E++A +EL ++  D K+P++ P+     R                    QPY+ NL V +K+R    G+ LVR  E++AKN WGY RMYLHVD  +PAA  LY S GY  +     P W
Sbjct:   89 GLVEEEELPDLCKFIITAFGAEAIQLASDMNSFERMLLNPAAEFLNGYSGLVAFAEVFSGTKQRLADR-----FQENPSLVDISAPDLKGLSREEQIRKAERDSLVLILGKPSNDASRSI-EVIASIELRLQPCDAKIPFSIPWLDRVERRIGSLIGLGNNGNGAGTNDMQPYLSNLCVDEKFRGQKIGRGLVRCVENIAKNSWGYNRMYLHVDEDNPAALNLYKSEGYSDVGHRWNPFW 322
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BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A7S4AXY7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXY7_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.260e-19
Identity = 75/243 (30.86%), Postives = 108/243 (44.44%), Query Frame = 2 
Query:  383 GLVEESDLPDVSALLVEVFEPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEG--GNFDRSSDALVLAVRD-------RSSVGANPSPATPQDGGNGDVDGGESTGEIVAVVELTIRQPDGKLPYNWPFPAPWRR-------------AKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVW 1045
            GLVEE +LPD+   +V  F    +    + +  E ++L       N Y   VA+ E+    K R   R        D S+ AL    R+       R S+    + AT   G     D    + E++A +EL ++  D K+P++ P+     R                    QPY+ NL V +K+R    G+ LVR  E+VAKN WGY R+YLHVD  + AA  LY S GY+ +     P W
Sbjct:  114 GLVEEEELPDLCKFVVTAFGAEAIQLSSDINSFERMLLNPAAEFLNGYSGLVAFAEVFSGTKQRLADRFREHPSLVDISAPALKGLSREERIRKVERESLVLVLARATNDTG-----DKNSKSIEVIASIELRLQPCDAKIPFSIPWLDRVERRIGSLVGLGNIDDVAGSNDLQPYLSNLCVDEKFRGQKIGRGLVRCIENVAKNSWGYNRIYLHVDEDNIAALNLYKSEGYRDVGHRWNPFW 351
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A7S2GAU2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAU2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.730e-14
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 2 
Query:  737 AVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMG--DPAATGLYSSMGYKSIEKYD-APVWMRKLLQLPTI 1075
            A  E+    P  +LP N   P PWR     +  +PY+ N+AVA+  RR   G  L+RLCE +A+ HW ++ +YLHVD    D AA  LY+S+GY+++ + +  P  + + L +P++
Sbjct:    1 ATAEIAFEIPQNRLPSN--TPNPWRPDPVLKDLRPYVCNVAVAEAARRKKIGTNLLRLCEQIARRHWDFDEIYLHVDPSKDDAAALKLYTSLGYENVPELNICPGPLDRALGMPSL 114
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A7S0L948_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L948_9EUKA)

HSP 1 Score: 78.6 bits (192), Expect = 9.850e-13
Identity = 70/245 (28.57%), Postives = 102/245 (41.63%), Query Frame = 2 
Query:  383 GLVEESDLPDVSALLVEVF-EPGVVLADGEFSQLEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDRSSDA-LVLAVRDRSSVGANPSPATPQDGGNGDVDGGESTGEIVAVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYD------APVWMRKLLQLPTI-RYQVK 1090
            GL    D+PD + L V+ F EPG    DG  S  + +            ++          L+ R G RL       S +A L+L V+D                         +TG + A  EL+++  DG LP  +  PA +           Y+ N  VA+ YRR   G  L+R CE + +  W Y  ++LHVD+ + AA  LY   GY  + +YD      AP    + L +P + RY VK
Sbjct:   37 GLPSTDDVPDAATLFVDAFTEPG----DGGSSAEDNLCA----------VREQRQELSAKGLQWRLGSRLASPGVHASLEASLLLLVQD------------------------VNTGALAAGAELSLQPTDGALPAEFAVPALFS-LHTAVSLGAYLSNFVVARGYRRQRLGSDLLRACETLVRYDWQYSELFLHVDVRNKAAMHLYEQAGYVPLTQYDRLAPPSAPTADARALSMPVLNRYHVK 242
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Match: A0A7S0SED7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SED7_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 5.630e-8
Identity = 35/106 (33.02%), Postives = 55/106 (51.89%), Query Frame = 2 
Query:  728 EIVAVVELTIRQPDGKLPYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAKNHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVW 1045
            E+V    L +  PD  LP  +P    +R          Y+ N+AVA + RR+G    +++  E VAK  WG++ ++LHV++ +P A  LY  +GY  I   + P W
Sbjct:   31 EVVGSATLQVCVPDAPLPPPFPTKKTYRA---------YLANMAVAPEARRSGVATSVIQCSERVAKL-WGFDELWLHVNIDNPGAQRLYEGLGY--IRVSEDPWW 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1224.1922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVP4_ECTSI1.120e-15264.45N-acetyltransferase domain-containing protein n=2 ... [more]
A0A6H5KVK2_9PHAE3.240e-9052.30N-acetyltransferase domain-containing protein n=1 ... [more]
D7FVP3_ECTSI9.230e-6460.42N-acetyltransferase domain-containing protein n=1 ... [more]
A0A836CNC1_9STRA1.010e-3936.40N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S0AJY5_9STRA2.500e-2533.48Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A448ZI05_9STRA6.320e-2028.75N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S4AXY7_9STRA1.260e-1930.86Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2GAU2_9STRA1.730e-1437.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0L948_9EUKA9.850e-1328.57Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0SED7_9CHLO5.630e-833.02Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1224contigH-canaliculatus_F_contig1224:204..5136 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.8
Seed ortholog evalue3.1e-124
Seed eggNOG ortholog2880.D7FVP4
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs2CZCN@1,2S9Q8@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-01_005990.1
Exons5
Model size1479
Cds size1140
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928939.7490206-UTR-H-canaliculatus_F_contig1224:203..5141622928939.7490206-UTR-H-canaliculatus_F_contig1224:203..514Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 204..514 -
1696845620.4358647-UTR-H-canaliculatus_F_contig1224:203..5141696845620.4358647-UTR-H-canaliculatus_F_contig1224:203..514Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 204..514 -
1622928940.2944074-UTR-H-canaliculatus_F_contig1224:5108..51361622928940.2944074-UTR-H-canaliculatus_F_contig1224:5108..5136Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 5109..5136 -
1696845620.4962292-UTR-H-canaliculatus_F_contig1224:5108..51361696845620.4962292-UTR-H-canaliculatus_F_contig1224:5108..5136Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1224 5109..5136 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928939.7652328-CDS-H-canaliculatus_F_contig1224:514..7431622928939.7652328-CDS-H-canaliculatus_F_contig1224:514..743Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 515..743 -
1696845620.4467819-CDS-H-canaliculatus_F_contig1224:514..7431696845620.4467819-CDS-H-canaliculatus_F_contig1224:514..743Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 515..743 -
1622928940.2480145-CDS-H-canaliculatus_F_contig1224:1532..16541622928940.2480145-CDS-H-canaliculatus_F_contig1224:1532..1654Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 1533..1654 -
1696845620.456289-CDS-H-canaliculatus_F_contig1224:1532..16541696845620.456289-CDS-H-canaliculatus_F_contig1224:1532..1654Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 1533..1654 -
1622928940.2619634-CDS-H-canaliculatus_F_contig1224:2764..30311622928940.2619634-CDS-H-canaliculatus_F_contig1224:2764..3031Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 2765..3031 -
1696845620.4649065-CDS-H-canaliculatus_F_contig1224:2764..30311696845620.4649065-CDS-H-canaliculatus_F_contig1224:2764..3031Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 2765..3031 -
1622928940.2714522-CDS-H-canaliculatus_F_contig1224:3978..40951622928940.2714522-CDS-H-canaliculatus_F_contig1224:3978..4095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 3979..4095 -
1696845620.4761608-CDS-H-canaliculatus_F_contig1224:3978..40951696845620.4761608-CDS-H-canaliculatus_F_contig1224:3978..4095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 3979..4095 -
1622928940.2834406-CDS-H-canaliculatus_F_contig1224:4703..51081622928940.2834406-CDS-H-canaliculatus_F_contig1224:4703..5108Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 4704..5108 -
1696845620.4862576-CDS-H-canaliculatus_F_contig1224:4703..51081696845620.4862576-CDS-H-canaliculatus_F_contig1224:4703..5108Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1224 4704..5108 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1224.1922.1prot_H-canaliculatus_F_contig1224.1922.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1224 515..5108 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1224.1922.1

>prot_H-canaliculatus_F_contig1224.1922.1 ID=prot_H-canaliculatus_F_contig1224.1922.1|Name=mRNA_H-canaliculatus_F_contig1224.1922.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=380bp
MLLNLGGTPISPNTAVYPLPPVLWSSPASTVSSPLCLSHFSITTRTSSNS
RRRRTRPNSAPGPTLLHPSGSGPEGVPSSLFKFQPRPTPKKKPQQAPAGG
GGRAVATSVIAERDALYAGLVEESDLPDVSALLVEVFEPGVVLADGEFSQ
LEGVVLGAPLGMTNNYMKAVAYNEILYSLKSRCGKRLEGGNFDRSSDALV
LAVRDRSSVGANPSPATPQDGGNGDVDGGESTGEIVAVVELTIRQPDGKL
PYNWPFPAPWRRAKPPQKWQPYMGNLAVAKKYRRNGYGKQLVRLCEHVAK
NHWGYERMYLHVDMGDPAATGLYSSMGYKSIEKYDAPVWMRKLLQLPTIR
YQVKEFKGRKGATSPSAAAGIASEFKSQG*
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mRNA from alignment at H-canaliculatus_F_contig1224:204..5136-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1224.1922.1 ID=mRNA_H-canaliculatus_F_contig1224.1922.1|Name=mRNA_H-canaliculatus_F_contig1224.1922.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4933bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:204..5136- (Hapterophycus canaliculatus Oshoro5f female)
GCAAGTAAGAGATAGGACCGCTGTAGCGATGTTGCTGAACCTCGGAGGGA
CCCCGATCTCCCCAAATACCGCGGTGTACCCACTACCGCCAGTCCTGTGG
TCTTCGCCGGCGAGTACGGTGTCCTCTCCCTTGTGTCTCTCACACTTCAG
CATCACAACCAGGACGAGCAGCAACAGCAGACGACGAAGAACGCGGCCAA
ACTCAGCGCCAGGACCTACACTACTCCATCCCAGTGGTAGTGGTCCTGAG
GGAGTACCCTCTTCTCTCTTCAAGTTCCAGCCGAGGCCCACGCCAAAAAA
AAAACCACAACAGGCCCCAGCTGGCGGAGGCGGCAGAGCTGTTGCAACCT
CTGTGATAGCTGAACGAGACGCTCTGTACGCTGGCTTAGTGGAGGAATCT
GACCTTCCTGACGTCTCGGCTCTGCTCGTAGAGGTGAGGACACGATGCAC
CAACGGTTTCGACAGTCAAACCCAACAAGGCGCATCAATGTAGTCTTATC
TCTTCCCATTCTCGTTGCAGCCATCAGAACCTTGAACCATTTTCACCTTG
CATCAGCAGGCGACTTGGACTTGTTTGCCTCCGCGGCGGTATCAGCCTCA
GCAACTGATTCAGCTGCAGCGGCGAAAAACTGTAGGATATTGATGGGTTG
CTGCCAGGGCCCGCAGCTCGTATGTAGCCCAGAGGCACGATCTACCTTTC
TCAATGGGTCATGCATCACCCGGCAGATCGCACCTGGCGACCGCCTCACC
AACTCGGATGGACGGCTTTCGGGTTTCCGTCGACAATAGCCAACAGGCAC
TCGCTGTTTCCGTCATGCCCTGATCCATACATTCGCCTCGAAGTACCGCA
CATCTGCGTCGGATAACGAGGACCCCGGTGAAAGTCGGTGCCATGTGCTC
ATCAGGCGTGTCATACTCACTTTTTTTGCTGTCGGACCAGCTGACTGGAT
TGTGTCGTCGATTTGTGTCGTCGATTTGTGCGTCCACATGGGTGATCCCT
ACCGTAGATCAAAGGCGCTTGCTCTTCATGCGTGGAACCAGGTGTTCGAA
CCTGGCGTCGTGCTTGCGGATGGCGAGTTCAGCCAGTTGGAGGGCGTTGT
CCTCGGCGCGCCGCTTGGAATGACCAACAACTACATGAAAGCAGTGGCCT
ACAACGAGGTTCGTGCCGCGAGGCGATGCTTGGAGGTGTCAAGCGAAGCT
CACCAGCGTGCAGGAAGGGTGTGGAGGATCGGACTTCAGACCCGTGTAGC
GGTTGCTTTAATCTCGACTGCGTTCAAAGTCAAGCGTTCGAACGGGGGAA
TTGTTTGGTCGCAATGCAAAATGCGTGAAAACAGTGGCTGCGTGAATTTC
GACCGCCTGCGGTGAGCCACAACAAAGCGCTGAGGGCGGCTTCGTGTCCG
CTTTGGAGATGTGTCGCTTATGCGGTTAGTCTTTTAGGACTTCCTCCGAA
GAGTCTTGCCTCCTTCACGGCACTGCTTGGAATCGAAGAGGGACGCGCTG
CAAAACGGCAGGAATAGCAGGCTTGCGTGACCGCTTCAGCAGCACTCTTC
CGGAGGCAGGACTGGCCTCGCGGTGAAGACCCAGGAATGCGCTCATGAGC
CTCCCGGCGGCACAGTTCAAGGGTTTCGCACTCAGAGATGAAGCCGCTGT
CTCGCACTCACAACCCAAGTATTCATGGACAGCATCATCGACAAACGTAA
TATCCTCGATCTCCTCTCACTGTCCTTTTCCTACAAGAACGTGGCCTCAA
AAGCGATTGGAAAGCCTTGCTTTTGTCGTGACTCGTAACGTGTGTCCACC
GGTGATGTGATCAACTTGGCAGAATCTCTGAAGGTTACCTCCTGCATGTA
CGTGCGTACCAACGGTTGGGAGAGAAACGTTTCGGATCTTCCATGATCCG
TTCGGCGAGGTTTGATCAAGTTTTGTCGCCTATCCAAGGTTGTGAAGTTG
ACTATATCGATAACGACGACAGCAGCGACAATGACAACGACAACGACAAC
GACAACACGACAAGACAATCATAAAGACAACATAGTCCATCTCACCGGTG
GTCTCCACAACTATCTTTCCCTTGTCCTCCTTTGGGCAACCTACAACCAA
TCCAGATACTCTACTCGTTGAAGTCGCGATGCGGGAAACGCCTGGAGGGC
GGAAACTTTGACCGCAGCAGCGACGCCCTCGTGCTGGCCGTAAGAGATCG
ATCCAGCGTCGGCGCTAACCCATCCCCCGCGACCCCGCAAGATGGGGGGA
ATGGGGATGTGGATGGCGGCGAGAGTACCGGAGAAATTGTGGCGGTGGTA
GAGCTGACGATACGGCAGCCGGACGGAAAGCTACCCTACAACTGGCCCTT
CCCTGCCCCCTGGCGACGAGCGGTGAGCGTGAATCAGTGCGTGCGGCGTG
TAGGAGATACCGTGTGACCGGGTGAAAGCGCTCTAGGTGATCCGTTCGCT
TGGGAGAGATGACCGATCGACTGTTGGATCTATTTTTGAAGGAGAGATTG
GTGCCACCTCTCATTACCGACGGCAGGTCGGTCCTTTCTCCAACGCATAT
GTCTTTACGGGAAGCACCGTAATGCAAGCGACCCTGCTCTCCTCATTGCA
TGTCCATTGCAGTTTTATCTGTTTGTGACGCGAGGTGGGTCGATGTTGGC
GCACGGGATGTTGATGGACACGTTTCGAAGTCTCGCGTACATAATAGATC
AGATCGCACGCTCTCCCGCTTTTTTCACGTAACCACATCACATTGTACTT
GTAGGGATATTGCGACAAGGAAAAATCCCGGGTGTACGCGTGCAACGTGA
CACAGGCATGGCTTCCATAAAGATATATAAAACAGCATGTTCCGAAGCGT
CCACAATTTCAAAACTTCTCCGCGTCGTAGCGGGGGTGTCGGAAGGTGAG
AGCGCGTGCCTGGTGCCAAGGCAAAATATATTTTCTACGCCCGCCGGAAA
AGCTCCGCTCGCTGCCACCGCAAAGCAACACTCATTTCCGAAAGAGCATC
ACAAAAGCACCCCAACACGCCTCACGAAACACCAAAACTTGAAACAACTG
AATCGGGGAGCTTGCGTGCGGAAGCTGCCTTTTGACGCGGCGACATCACG
CTACATAGGCTAGAAGCTCTTTTCAACAAAAGAGGTTGCCCGTGGGACGT
GTCTCTTTTTTGCGTGTGCGCTCGGTACTCTTTTATCCAACGAAAATGTC
TTCGGCGTTTTTATGATGGCGAAAATGCGAGCGCTTTTCTATCAGGTTTC
CGTGGTTGCTGTTACCGCTCTCCGTGCCGTGTTCAACGTCTTGTGCATCT
CTCAGCCATACTCCACCAAAGCGACGCGCTCCATGGTTTGCGCCGCGAGC
GTGTGGGAAATCCAAGCAGCGCATGAATTCTGGTATGAACCATCGCAGCG
CTACGTGAGAGTGCAAGAAGATTGTGACCGAGCTTATATTGTGCTCCCCC
CCCCCAACACCACCACCGTACCCGTACTGCAGAAGCCGCCCCAGAAATGG
CAGCCCTACATGGGCAACCTTGCCGTTGCCAAAAAGTACCGAAGGAACGG
CTACGGGAAGCAACTCGTGCGACTCTGCGAGCACGTCGCCAAAAACCACT
GGGGGTGAGTGGAGACGAATGTCGAGAAACAGATACCGCCTATACATAGA
CATAAAGAACAACCGCCTGTGTTTGGCTCACAAGCATGCGTGTCAATGCT
TGGTCGTTCGTGTGATTCTCCTTGTCTCCACGGTTTGATTATTTTCACGT
CGTTCGCTTTTGGAGGAAGACGCAGTTCGAGGCTTGCTTGCGCACGTACA
GTTTTTGGATTTGTGGAAAGACGTGGGGTGCGAGCAACCTACGGGTTTGT
GCGTCGTGGTTCCATCTTTGTGGAACGGGTAGCGTCTAACGTACTCCTAT
TTTTGTCAAGAAAATCCCCAACAGGGAAACACAAAGCGGCCACTCAGCTC
ATGAAGAGTTTACCAAGCGGTGTTTCAGGTTCAAGTTCTCGGCATTTCAA
GCCCCGCCTATTTCTTCTTATTCGTCGACATAATGCATGGGTATTGATGT
AATGCTAAAGCCGTTGCCGGCATCCTGGTCGGTGCGGGGAGTTGCTCTTA
CCTCATCGTTGCCGCCGTAAGAATTCGTGTTTCCGCTTTCCGCTGCCCTT
GTTGAGGTGGTTCCTTCACGCTAGAAGCTTCCCCAATTATTTGCCGCCTC
GGACTGGATTTTGTACTCGCGCCCCAACATCAGGCGGAGTCGAAGCCCCA
CGATTGTGTGTTCCTTCGTCATCATTATTTCGAGTTTCGTCGTCGTTACA
CCTATCCACCTTCCTTCATGGGTCTTCCGGAAGTATTTTTTTCTTCCTTT
CCAACGCAGCAACCCCGATCACTTTGTGCTCGTCCGAATCTAGGTACGAG
CGCATGTACCTTCATGTGGACATGGGCGACCCCGCGGCGACAGGGCTGTA
CTCGTCGATGGGGTACAAGAGCATAGAGAAGTACGATGCACCGGTGTGGA
TGAGAAAACTCCTCCAGTTGCCGACTATTCGGTATCAGGTCAAGGAGTTT
AAGGGCAGAAAGGGCGCGACGTCGCCATCGGCAGCTGCTGGTATCGCCAG
CGAGTTCAAGAGTCAAGGTTGAGGTGCTTCCTTAGCCGCAGCTCTTCACT
CCATTTATTTCGGAAGGGAAATAAGCACTCTGAAACACATGTCAGCAAAC
CTAGGTCGCAACTTAAATTTGATGGTAGAGTGCTTGATCGGAATGGCGTC
GGCAATTCTGTCCGTGTGAGGTGTGTGTTTTTTCCGCTGGGGCGCCGCTG
CCTTTATTTCACAAGAACCAAGAGTGTGAAGAGGTGCACTTGGCGATCTT
TTATCACGGTTTAGGGAAAGCCGCCATCGACTCGGGAACTTGGCAGCTCT
CAATCGAGGACTTGCCTGATGAAATGTACAAGC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1224:204..5136-

>mRNA_H-canaliculatus_F_contig1224.1922.1 ID=mRNA_H-canaliculatus_F_contig1224.1922.1|Name=mRNA_H-canaliculatus_F_contig1224.1922.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2280bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1224:204..5136- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTGCTGAACCTCGGAGGGACCCCGATCTCCCCAAATACCGCGGTGTA
CCCACTACCGCCAGTCCTGTGGTCTTCGCCGGCGAGTACGGTGTCCTCTC
CCTTGTGTCTCTCACACTTCAGCATCACAACCAGGACGAGCAGCAACAGC
AGACGACGAAGAACGCGGCCAAACTCAGCGCCAGGACCTACACTACTCCA
TCCCAGTGGTAGTGGTCCTGAGGGAGTACCCTCTTCTCTCTTCAAGTTCC
AGCCGAGGCCCACGCCAAAAAAAAAACCACAACAGGCCCCAGCTGGCGGA
GGCGGCAGAGCTGTTGCAACCTCTGTGATAGCTGAACGAGACGCTCTGTA
CGCTGGCTTAGTGGAGGAATCTGACCTTCCTGACGTCTCGGCTCTGCTCG
TAGAGATGTTGCTGAACCTCGGAGGGACCCCGATCTCCCCAAATACCGCG
GTGTACCCACTACCGCCAGTCCTGTGGTCTTCGCCGGCGAGTACGGTGTC
CTCTCCCTTGTGTCTCTCACACTTCAGCATCACAACCAGGACGAGCAGCA
ACAGCAGACGACGAAGAACGCGGCCAAACTCAGCGCCAGGACCTACACTA
CTCCATCCCAGTGGTAGTGGTCCTGAGGGAGTACCCTCTTCTCTCTTCAA
GTTCCAGCCGAGGCCCACGCCAAAAAAAAAACCACAACAGGCCCCAGCTG
GCGGAGGCGGCAGAGCTGTTGCAACCTCTGTGATAGCTGAACGAGACGCT
CTGTACGCTGGCTTAGTGGAGGAATCTGACCTTCCTGACGTCTCGGCTCT
GCTCGTAGAGGTGTTCGAACCTGGCGTCGTGCTTGCGGATGGCGAGTTCA
GCCAGTTGGAGGGCGTTGTCCTCGGCGCGCCGCTTGGAATGACCAACAAC
TACATGAAAGCAGTGGCCTACAACGAGGTGTTCGAACCTGGCGTCGTGCT
TGCGGATGGCGAGTTCAGCCAGTTGGAGGGCGTTGTCCTCGGCGCGCCGC
TTGGAATGACCAACAACTACATGAAAGCAGTGGCCTACAACGAGATACTC
TACTCGTTGAAGTCGCGATGCGGGAAACGCCTGGAGGGCGGAAACTTTGA
CCGCAGCAGCGACGCCCTCGTGCTGGCCGTAAGAGATCGATCCAGCGTCG
GCGCTAACCCATCCCCCGCGACCCCGCAAGATGGGGGGAATGGGGATGTG
GATGGCGGCGAGAGTACCGGAGAAATTGTGGCGGTGGTAGAGCTGACGAT
ACGGCAGCCGGACGGAAAGCTACCCTACAACTGGCCCTTCCCTGCCCCCT
GGCGACGAGCGATACTCTACTCGTTGAAGTCGCGATGCGGGAAACGCCTG
GAGGGCGGAAACTTTGACCGCAGCAGCGACGCCCTCGTGCTGGCCGTAAG
AGATCGATCCAGCGTCGGCGCTAACCCATCCCCCGCGACCCCGCAAGATG
GGGGGAATGGGGATGTGGATGGCGGCGAGAGTACCGGAGAAATTGTGGCG
GTGGTAGAGCTGACGATACGGCAGCCGGACGGAAAGCTACCCTACAACTG
GCCCTTCCCTGCCCCCTGGCGACGAGCGAAGCCGCCCCAGAAATGGCAGC
CCTACATGGGCAACCTTGCCGTTGCCAAAAAGTACCGAAGGAACGGCTAC
GGGAAGCAACTCGTGCGACTCTGCGAGCACGTCGCCAAAAACCACTGGGG
AAGCCGCCCCAGAAATGGCAGCCCTACATGGGCAACCTTGCCGTTGCCAA
AAAGTACCGAAGGAACGGCTACGGGAAGCAACTCGTGCGACTCTGCGAGC
ACGTCGCCAAAAACCACTGGGGGTACGAGCGCATGTACCTTCATGTGGAC
ATGGGCGACCCCGCGGCGACAGGGCTGTACTCGTCGATGGGGTACAAGAG
CATAGAGAAGTACGATGCACCGGTGTGGATGAGAAAACTCCTCCAGTTGC
CGACTATTCGGTATCAGGTCAAGGAGTTTAAGGGCAGAAAGGGCGCGACG
TCGCCATCGGCAGCTGCTGGTATCGCCAGCGAGTTCAAGAGTCAAGGTTG
AGTACGAGCGCATGTACCTTCATGTGGACATGGGCGACCCCGCGGCGACA
GGGCTGTACTCGTCGATGGGGTACAAGAGCATAGAGAAGTACGATGCACC
GGTGTGGATGAGAAAACTCCTCCAGTTGCCGACTATTCGGTATCAGGTCA
AGGAGTTTAAGGGCAGAAAGGGCGCGACGTCGCCATCGGCAGCTGCTGGT
ATCGCCAGCGAGTTCAAGAGTCAAGGTTGA
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