mRNA_H-canaliculatus_F_contig12235.1920.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: D7FZF7_ECTSI (ENTH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF7_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.270e-113 Identity = 174/245 (71.02%), Postives = 188/245 (76.73%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAPVKPKEIDLGIEDAFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRSEGVEDSDYTRQAQAEDLLDLDIGGDTAAPAAGVPEAQDLV 735
+VG FLFNEKAEWATSRELHGLAALTFNEKECAGVMAVI KALNP+D+TWRTL+KAVRLLRHFV+YGAERCVDHAWD QRR+EELRRYNSAMHGRTS LNGGGTDFGGPVREAAAE +DAFGIVP+GS+GAKFDLKQVPGLYEGRP+RYFD+ DPRKRS+GVEDSD+TRQAQA DLLDLDIGG+T P A VPEAQDLV
Sbjct: 25 KVGSFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVIGKALNPKDSTWRTLNKAVRLLRHFVLYGAERCVDHAWDHQRRIEELRRYNSAMHGRTSTLNGGGTDFGGPVREAAAE----------------------------------------------DDAFGIVPQGSMGAKFDLKQVPGLYEGRPDRYFDDKADPRKRSQGVEDSDHTRQAQAVDLLDLDIGGETT-PTASVPEAQDLV 222
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A835YVG9_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG9_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.740e-83 Identity = 137/233 (58.80%), Postives = 168/233 (72.10%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAP---VKPKEIDLGIEDAFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRSEGVEDSDYTRQAQAEDLLDLDIGGD 690
++G FLF+E +WATSRELHGLAA TFN+ ECA V A++T +++P++NTWRT+ KAVRL+ H V YGAERCVDHAWD QR+++EL RYNSA+H RT L GGG D+G PVREAA E+ LLKD++ IR R E R ALLP+GA DDY AP + P D FG+V ++GAKFDL VPG+Y GRP RYFDNT D R + VEDS TRQ A+DLLDLD+ D
Sbjct: 23 KLGAFLFDENVDWATSRELHGLAAYTFNDYECAVVYAMLTASMDPKNNTWRTILKAVRLVNHCVTYGAERCVDHAWDAQRQLDELTRYNSAVHSRTGALAGGGVDYGAPVREAAKEVLVLLKDTDRIRRQRAEARDTGALLPLGATDDYAAPQQTLDPLAAARRTSDTFGVVQTDALGAKFDLNSVPGMYNGRPARYFDNTADRRNHNR-VEDSQRTRQYFAQDLLDLDLPTD 254
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A7S2S6F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6F2_9STRA) HSP 1 Score: 208 bits (530), Expect = 5.050e-62 Identity = 125/250 (50.00%), Postives = 159/250 (63.60%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALL--PIGAADDYKAPVKPKEIDLGIED-AFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRSEGVEDSDYTRQAQAEDLLDLDIGGDTAAPAAGVPEAQDLVVS 741
+V L N+KA+ A+S++LH +AAL+FNE E + V+ AL+ + N+W+TL KAV LL H V +GAERCVD AWD R VE L +YNSAM GG DFG PVR+ A L LLKD EAIR AR +T + + PIGA +DY AP + + G + AFG ++ A++ ++Q PG+YEGRPERYFDN DPR+R GVEDS TR A A DLLDLD G TA+ + V E QDL S
Sbjct: 32 KVMTLLHNDKAQSASSKDLHAMAALSFNEGEAGHLFRVLRAALDSQQNSWQTLVKAVLLLDHLVRFGAERCVDFAWDMLRVVEGLAQYNSAMVKTALGTPRGGRDFGEPVRDQAGRLLALLKDDEAIRTARRSIQTENQGIAPPIGA-EDYTAPTQEPTVKAGRDSRAFGSQAGIALSAQYSIEQTPGMYEGRPERYFDNQDDPRRRIGGVEDSHITRNALAGDLLDLDFG--TASGPSTVLETQDLAQS 278
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A7S1TSE1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSE1_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.870e-57 Identity = 112/244 (45.90%), Postives = 150/244 (61.48%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAPVKPKEIDLGIEDAFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRSEGVEDSDYTRQAQAEDLLDLDIGGDTAAPAAGVPEAQDL 732
+VG LF++K + A+SREL+G+AALTFN +C +M ++ AL+ +TW+T KA+ L+ VV+G+E VD + +R V++L YNSA + + GGG D GGPVRE A +L LL ++ IRE R R P+ L+P+G D + G ++AFG V S+GAKFDL VPGLYEGRP+RYF+N DPR R VEDS +TR A A DLLDLD A A +P A L
Sbjct: 41 RVGVLLFDDKEDGASSRELNGVAALTFNADQCDEIMDMLVVALDSEQSTWKTHLKALMLMNTIVVHGSEPGVDGVINLEREVQKLEVYNSATASKLHGMRGGGIDEGGPVRETAKKLASLLSSTDRIREVRRNARDPNTLVPMGEHDYERKAPSSSAAGPGDDNAFGQVRTDSLGAKFDLSAVPGLYEGRPDRYFENPEDPRARGT-VEDSSHTRNALAGDLLDLDFA--PTATANALPAADFL 281
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A7R9UA05_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA05_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.060e-51 Identity = 107/247 (43.32%), Postives = 151/247 (61.13%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAPVKPKEIDLGI---EDAFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRSEGVEDSDYTRQAQAEDLLDLDIGGDTAAPAAGVPEAQDL 732
+V FLF+++ E +SR+L+G+AALTFN ++C V+ ++ AL+P+ ++WRT+ K + L++ + +G+E V+ + R+V L+ YNSA+ L GGG D G PVRE A E+ L +D IRE R + R A++P+G D Y PV+ D GI D FG V +GAKF L+Q PGLYEGRP+R+F+N D R + VEDS +TR A AEDLLDLD A A +P A L
Sbjct: 42 RVASFLFDDRDESVSSRDLNGVAALTFNAEQCKEVVDMMHVALDPQMSSWRTVKKGLMLVKTVMTHGSELAVNQLLELDRKVFPLQDYNSALASNFHTLKGGGVDAGRPVRELAREIAPLFQDMNKIRELRTQSRDERAMVPLGERD-YTRPVE----DPGIVPSTDTFGEVSANPLGAKFTLEQTPGLYEGRPDRFFENPADTRAQRGAVEDSQHTRDALAEDLLDLDFAPGQQAGAT-LPGADFL 282
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A482RUL1_9ARCH (ENTH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUL1_9ARCH) HSP 1 Score: 150 bits (378), Expect = 4.750e-41 Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 16 LFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAPVKPKEIDLGIEDAFGIVPEGSVGAKFDLKQVPGLYEGRPERYFDNTTDPRKRS 615
LF ++ + L+ LAALT+N K C + A + KA+ P +N W+T++KA+ LL ++YG+E +D A + V L+ YNSA+ + S + GGTD+G PVR AA + +L E IR AR E RT D L+P+G A + P + G++ +G SVGA F L+ VPG+YEGRP+RYFDN +D R R+
Sbjct: 28 LFTDQDIQMNDQRLNNLAALTYNSKSCENIFAELEKAITPTENPWKTIYKALLLLHTIILYGSELAIDKAISLCKFVHPLQAYNSALV-KKSFFSSGGTDYGAPVRATAAVITTILMKDENIRRARSEARTAD-LVPLGQAFEQHNPQQ------GLQMTYGQGLNSSVGAGFGLEAVPGMYEGRPDRYFDNESDIRNRN 219
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A7S1B9W0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9W0_9STRA) HSP 1 Score: 107 bits (267), Expect = 4.840e-23 Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 1
Query: 52 ELHGLAALTFNEKECAGVMAVITKAL-NPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAM-HGRTSVLNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIGAADDYKAPVKPKEIDL------GIEDAFGIVPEGSVGAKFDLKQVPGLYE---GRPERYFDNTTDP-----RKRSEGVE---DSDYTRQAQAEDLLDL 675
ELH LAALT+N E I + NP + T ++ +A+ L++H V+YG E+ VD+AW+ +E+L YN+A+ G + GGG D G +R+ AAEL ++L+DS+ IR R + P++L+P+ D P K + G FG VGAK L+++ L E P ++FD+ RK E + DS YTRQ A DLLDL
Sbjct: 66 ELHRLAALTYNHSENKRAFLKIRGVIENPENQTPASILRALILIKHLVIYGCEQSVDNAWELGPFIEKLTAYNTALGRGIIHKIQGGGVDKGFSMRQFAAELVNILRDSDKIRNLRRQNADPNSLVPVL---DIPKPAKMCQAQPALAFGGGYSSEFGKKETTVVGAKHSLEEMIKLAEKEKAAPVKFFDDREKEEDELRRKNMEPPQRSLDSAYTRQILAPDLLDL 289
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: A0A7S3HJ88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ88_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.430e-22 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 7 GGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSVLNGGGTDFGGPVREAAAELDDLL 363
G LF+E + L+ LAA T+N C + +I KA+NP +N W+T++KA+ LL V++G+E +D A + R V L +YNSA+ R GGGTD+GGPVR AA +D++L
Sbjct: 30 GNLLFSEIDVMMGDKRLNNLAAYTYNSVTCQKLFIMIEKAINPTENPWKTIYKALLLLHTIVLFGSELSIDKAIELCRFVRPLSQYNSALARRGLFSGGGGTDYGGPVRAAAKTVDEIL 148
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Match: B7FYF4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYF4_PHATC) HSP 1 Score: 78.2 bits (191), Expect = 6.560e-13 Identity = 48/161 (29.81%), Postives = 85/161 (52.80%), Query Frame = 1
Query: 1 QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKAL---------NPRDNTWRTLHKAVRLLRHFVVYGAERCVDHAWDQQRRVEELRRYNSAMHGRTSV--------LNGGGTDFGGPVREAAAELDDLLKDSEAIREAREEGRTPDALLPIG 432
++ L++E + TS EL+ LA+LT++E AG + +A+ P T LHKA+ ++ H +++GAE+ + A + V+ L+ YN+ + + + GGG D GGPVREA+ ++ LL + + + R+ P++L+PIG
Sbjct: 21 KLNNLLYDESVQTITSFELNQLASLTYHESSLAGADDDLAEAIYEALGRVLSQPASQTPLALHKALAVVHHVLIFGAEKSLAEAIFLGKHVDFLQSYNTVLLAQQQAGAAGIFMRIKGGGVDKGGPVREASQKVLRLLTNRQVLTRERQAQADPNSLVPIG 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12235.1920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12235.1920.1 >prot_H-canaliculatus_F_contig12235.1920.1 ID=prot_H-canaliculatus_F_contig12235.1920.1|Name=mRNA_H-canaliculatus_F_contig12235.1920.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=248bp QVGGFLFNEKAEWATSRELHGLAALTFNEKECAGVMAVITKALNPRDNTWback to top mRNA from alignment at H-canaliculatus_F_contig12235:34..3330+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12235.1920.1 ID=mRNA_H-canaliculatus_F_contig12235.1920.1|Name=mRNA_H-canaliculatus_F_contig12235.1920.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3297bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12235:34..3330+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12235:34..3330+ >mRNA_H-canaliculatus_F_contig12235.1920.1 ID=mRNA_H-canaliculatus_F_contig12235.1920.1|Name=mRNA_H-canaliculatus_F_contig12235.1920.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1488bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12235:34..3330+ (Hapterophycus canaliculatus Oshoro5f female)back to top |