mRNA_H-canaliculatus_F_contig12229.1913.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: D8LSH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH0_ECTSI) HSP 1 Score: 309 bits (791), Expect = 2.450e-103 Identity = 156/183 (85.25%), Postives = 168/183 (91.80%), Query Frame = 1
Query: 1 VGTVSFFFGLIGGTSSSI---MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPADRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
VGTVSF FGL+GGT SSI MLYQM+STDV G+ERHFEKPLFLTF+MFVAM+ ALPIYYVQQLLKAP DRPPKVP R+L WL+VPSIFDLAGTN AQIGLLFTTVSY+QLLRCTVIVVTAFLKAFVL+QRLAAYMWWGV INI+AMVLVSVTNFIAP+D QPDGANNP LGA FILLSC+VQ
Sbjct: 13 VGTVSFLFGLVGGTGSSIVIKMLYQMSSTDVAGNERHFEKPLFLTFIMFVAMSAALPIYYVQQLLKAPEDRPPKVPGRVLGWLVVPSIFDLAGTNFAQIGLLFTTVSYFQLLRCTVIVVTAFLKAFVLNQRLAAYMWWGVAINIVAMVLVSVTNFIAPEDAQPDGANNPALGAFFILLSCIVQ 195
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A6H5KUQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ5_9PHAE) HSP 1 Score: 304 bits (778), Expect = 9.440e-101 Identity = 153/181 (84.53%), Postives = 165/181 (91.16%), Query Frame = 1
Query: 1 VGTVSFFFGLIGGTSSSI---MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPADRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCV 534
VGTVSF FGL+GGT SSI MLYQM+STD+ G+ERHFEKPLFLTF+MFVAM+ ALPIYYVQQLLKAP DRPPKVP R+L WL+VPSIFDLAGTN AQIGLLFTTVSY+QLLRCTVIVVTAFLKAFVL QRLAAYMWWGV INI+AMVLVSVTNFIAP+D QPDGANNP LGA FILLSC+
Sbjct: 13 VGTVSFLFGLVGGTGSSIVIKMLYQMSSTDIAGNERHFEKPLFLTFIMFVAMSAALPIYYVQQLLKAPEDRPPKVPGRVLGWLVVPSIFDLAGTNFAQIGLLFTTVSYFQLLRCTVIVVTAFLKAFVLKQRLAAYMWWGVAINIVAMVLVSVTNFIAPEDAQPDGANNPALGAFFILLSCI 193
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A836CAF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF8_9STRA) HSP 1 Score: 250 bits (639), Expect = 5.580e-79 Identity = 131/183 (71.58%), Postives = 150/183 (81.97%), Query Frame = 1
Query: 1 VGTVSFFFGLIGGTSSSI---MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPADRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
VGTVSF FGLIGGT++SI +LYQ ++ D G HFEKP+ LTF+MFVAMA ALP + VQQ+LK PA+R VP R+L WL +PS+FDL GTN AQIGL++TTVSY+QLLRCTVIVVTAFLKAFVL RLA YMW GV INI+AMVLVS+TNFIAP+D QPDGANNP LG FILLSCVVQ
Sbjct: 14 VGTVSFVFGLIGGTATSIVIKLLYQQSAVDSTGAISHFEKPMLLTFIMFVAMAFALPCFMVQQMLKPPAERA-TVPRRVLLWLAIPSVFDLLGTNFAQIGLVYTTVSYFQLLRCTVIVVTAFLKAFVLKDRLAGYMWVGVAINIVAMVLVSLTNFIAPEDAQPDGANNPALGVFFILLSCVVQ 195
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A7S3UY76_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY76_HETAK) HSP 1 Score: 138 bits (347), Expect = 1.340e-35 Identity = 84/180 (46.67%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 13 SFFFG--LIGGTSSSI---MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPADRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVV 537
+FFF L GT +++ LYQM S G + + KP+ FVMFVAM ALPIY+VQQ+ + +VP+R+L + PS+FD+ GT L Q GL++T+ S YQ+LRC VI+ TA LK FV +RL +YMW G+ +N AM LVS T FI DD G N P LG ++I+ S VV
Sbjct: 17 AFFFAGALTFGTLTTLTCQFLYQMESVGANGYLKPYNKPITTVFVMFVAMMAALPIYWVQQVFFTEPNLRQRVPNRVLLKMAWPSLFDMLGTGLGQAGLVYTSASMYQILRCAVILCTATLKIFVFGERLTSYMWVGILMNTAAMALVSSTLFIGSDDEAVFGTN-PELGFLYIMGSVVV 195
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: K3WIZ6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIZ6_GLOUD) HSP 1 Score: 134 bits (338), Expect = 2.700e-34 Identity = 77/187 (41.18%), Postives = 117/187 (62.57%), Query Frame = 1
Query: 10 VSFFFGLIGGTSSSI-MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPI-----YYVQQLLKAPADRPPK----VPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
+ F GL+ GT +++ +LY + S ++G+ + FEKP+F T++MF AM ALPI +YV++ + A K +P ++ + L +P+ FDL T LA +GLL+ TVS +QL++CTVI+ A LK FVL RL YMW G+ +N LA++LV T+F D+ + ++P G V I+LSC VQ
Sbjct: 9 IVFGLGLVSGTGTTLYILYGIDSVGLDGEVKKFEKPIFQTWLMFFAMVFALPIQWGYHWYVERKWRVTARNGMKYRYKIPRKMYFLLALPAAFDLLATFLANLGLLYVTVSVFQLMKCTVIIFVAMLKVFVLKDRLRGYMWIGIALNTLAVLLVGATSFADSDEQVNNKDSHPGFGIVMIVLSCGVQ 195
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: F0WQC0_9STRA (Drug/Metabolite Transporter (DMT) Superfamily putat n=2 Tax=Albugo TaxID=65356 RepID=F0WQC0_9STRA) HSP 1 Score: 134 bits (337), Expect = 4.540e-34 Identity = 76/187 (40.64%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 16 FFFGLIGGTSSSIM---LYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYY-----VQQLLKAPADRPPK----VPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
F FGLI GT ++++ LY + + + G+ + FEKP+F T++MF+AM ALPI++ V++ P+ P K +P R + L P++FDL T A IGL++ TVS +QL++CTVI+ A LK F+L +L YMW GVG+N LA +++ +T+F + A P G + I+LSCVVQ
Sbjct: 22 FGFGLITGTGTTLLAKILYNVDAVGLGGEMKKFEKPIFQTWLMFLAMVFALPIHWAYRWHVERKWSRPSSTPLKFRYRIPRRTYFLLAFPALFDLIATWFANIGLMYVTVSVFQLMKCTVIIFVALLKVFMLKDKLRGYMWIGVGLNTLAALMIGITSFADTKEQINIRAETPGFGVLMIVLSCVVQ 208
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A1V9Y8M9_9STRA (Drug/Metabolite Transporter (DMT) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8M9_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.630e-33 Identity = 81/193 (41.97%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 4 GTVSFFFGLIGGTSSSIM---LYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPA-----------DRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
G V F GLI GT +++M +Y + + ++G + FEKP+F T++MF AM ALPI Y L RP +VP + + L +P+ FDL T LA +GLL+ TVS +QLL+CTVIV A LK VL RL YMW G+G+N A V+V T+F ++ Q + +N+P LG + I+ SC VQ
Sbjct: 960 GIVVFTLGLITGTGTTLMSKIMYNIDAVGLDGTRKKFEKPIFQTWLMFAAMVFALPIQYAYHLYLERQWYANGGKINGFKRPNRVPIKTYFILALPAAFDLIATYLANLGLLYVTVSVFQLLKCTVIVFVALLKVLVLKDRLRGYMWIGIGLNTAAAVMVGFTSFQDAEE-QLNSSNHPGLGVLLIVSSCFVQ 1151
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A6G0XVI4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVI4_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.200e-33 Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 1
Query: 10 VSFFFGLIGGTSSSIM---LYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYV-------QQLLKAPA----DRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
V F GL+ GT +++M +Y + + ++G+ R FEKP+F T +MF AM ALPI ++ Q K A RP ++P R + L +P+ FDL GT LA +GLL+ TVS +QL++CTVI+ A LK VL L YMW G+G+N +A ++V ++F ++ Q + +NP LG + I+LSC VQ
Sbjct: 9 VVFSLGLLTGTGTTLMSKVMYDIDTIGLDGETRKFEKPIFQTMLMFAAMVFALPIQWIYHWNLEHQWHAKGGALSGFKRPARIPMRTYFILALPAAFDLLGTYLANLGLLYVTVSVFQLMKCTVIIFVALLKVLVLGDHLKRYMWIGIGMNTVAALMVGFSSFQDTEE-QINNNDNPGLGIIMIILSCFVQ 198
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: T0Q499_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q499_SAPDV) HSP 1 Score: 131 bits (329), Expect = 6.280e-33 Identity = 79/193 (40.93%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 4 GTVSFFFGLIGGTSSSIM---LYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPIYYVQQLLKAPA-----------DRPPKVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANNPVLGAVFILLSCVVQ 540
G V F GL+ GT +++M +Y + S +G + FEKP+F T++MF AM ALPI Y+ + RP +VP + + L +P+ FDL T LA +GLL+ TVS +QL++CTVI+ A LK VL L YMW G+ +N A ++V T+F DD Q + NNP LG + I+LSC VQ
Sbjct: 7 GIVVFTLGLLTGTGTTLMSKVMYNIDSIGSDGLLKKFEKPIFQTWLMFAAMIFALPIQYLYHMHLERQWHAAGGKITGFKRPARVPIKTYFVLALPAAFDLIATYLANLGLLYVTVSVFQLMKCTVIIFVALLKVLVLKDHLRGYMWIGIAMNTAAAIMVGFTSFQDTDD-QLNSTNNPGLGILMIVLSCFVQ 198
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Match: A0A2P4YMD0_9STRA (Drug/Metabolite transporter (DMT) Superfamily n=12 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4YMD0_9STRA) HSP 1 Score: 130 bits (328), Expect = 7.530e-33 Identity = 73/186 (39.25%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 16 FFFGLIGGTSSSI-MLYQMTSTDVEGDERHFEKPLFLTFVMFVAMACALPI-----YYVQQLLKAPADRPP---KVPSRILWWLIVPSIFDLAGTNLAQIGLLFTTVSYYQLLRCTVIVVTAFLKAFVLHQRLAAYMWWGVGINILAMVLVSVTNFIAPDDTQPDGANN--PVLGAVFILLSCVVQ 540
F GLI GT +++ +LY + S ++G+ + FEKP+F T++MF+AM ALPI Y+V++ + + ++P ++ + L +P+ FDL T +A +GL++ TVS +QL++CTVI+ A LK FVL RL +YMW G+G+N+LA ++V T+ +A D+Q + + N P G ++LSC +Q
Sbjct: 11 FVMGLITGTGTTLYILYGVDSVGLDGEVKKFEKPIFQTWLMFLAMVFALPIHWAYHYHVEKQWRRNRNGMKYRYRIPRKMYFLLALPAAFDLLATFVANLGLIYVTVSVFQLMKCTVIIFVALLKVFVLKDRLRSYMWIGIGLNMLAALMVGATS-LADSDSQDNNSTNQHPAFGVFMVVLSCAIQ 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12229.1913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12229.1913.1 >prot_H-canaliculatus_F_contig12229.1913.1 ID=prot_H-canaliculatus_F_contig12229.1913.1|Name=mRNA_H-canaliculatus_F_contig12229.1913.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=180bp VGTVSFFFGLIGGTSSSIMLYQMTSTDVEGDERHFEKPLFLTFVMFVAMAback to top mRNA from alignment at H-canaliculatus_F_contig12229:338..3363+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12229.1913.1 ID=mRNA_H-canaliculatus_F_contig12229.1913.1|Name=mRNA_H-canaliculatus_F_contig12229.1913.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3026bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12229:338..3363+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12229:338..3363+ >mRNA_H-canaliculatus_F_contig12229.1913.1 ID=mRNA_H-canaliculatus_F_contig12229.1913.1|Name=mRNA_H-canaliculatus_F_contig12229.1913.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1080bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12229:338..3363+ (Hapterophycus canaliculatus Oshoro5f female)back to top |