prot_H-canaliculatus_F_contig1222.1909.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1222.1909.1
Unique Nameprot_H-canaliculatus_F_contig1222.1909.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length519
Homology
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: D7FXK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK9_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 7.920e-99
Identity = 303/553 (54.79%), Postives = 338/553 (61.12%), Query Frame = 0
Query:    1 MRRSR-ATPKGEVNGDDPGEMVVGTGVTMDFSAVDDPSLNVVVRGVMRHAVLKTESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADEGIGDIPVPDLPAGTWDNFWA--AGXXXXXXXXXXXXXXXXXXXXXSSFTRTPS---------LRSVAKGISSREQLAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAGATESWAGRXXXXXXXXXXXASLSPPSRLVFGAAGIGG------LLSPTAAISASSGTWGALLDPPAVDGQSVGGSETAELDMLDFLQEAGQQRLREEAREEVGLTPLVSGRTEACLFGLVVGLVRRRVGWLGETGREGSRRGSSDTRQAAS-----------PKEPAAPAXXXXXXXXXXXGR--RIKSQGPASVFPSPSSADAKPSS---GGGGSNFAATSPDRELGAAANPAARSEPRXXXXXXXXXXXXXXXSTWSQGGRQQRPEQPR-EPKTAEERLKDIEDAKAALRTRVALRKA 518
            MRRSR A PK +  GDD G+MVVGTGVTMDFSA+DDPSL VVVRGVMRHAVLKTE+V+VTGR HG VEA TLE+SKGALFLGKAMV SATVAGRLEGILVV +ML MR SGH DGV RYGQLNVQHGGKLTGAVKA S AD GIGDIPVPDLP GTWD+FW    G   XXXXXXXXXXXXXXXXXX+S  R            L S A G+S  +    EA     XXXXXXXXXXXXXXXXXXXX  E             XXXXXXX    +SP ++LVFG            +LSP +A+S   G WGA  DPPAVDG S GGSETAE+DM+DFLQE GQQRLR+EAREE     + +  T     G V G  R   G   E G + +    S  +Q AS             E +A              R   I+     SV    ++  AK +    G  G +F AT P   + AAA  A R+EPR               +TWS    Q R  QPR  PKT EERLK IEDAKAALR+RVALRKA
Sbjct:    1 MRRSRNAPPKVDEGGDDSGQMVVGTGVTMDFSAMDDPSLTVVVRGVMRHAVLKTENVIVTGRLHGNVEAKTLEISKGALFLGKAMVGSATVAGRLEGILVVGNMLPMRSSGHWDGVFRYGQLNVQHGGKLTGAVKAASPADVGIGDIPVPDLPPGTWDDFWGKGGGGRAXXXXXXXXXXXXXXXXXXTSLRRVSEPLQTENAAQLESAAAGVSGED----EAPPGTAXXXXXXXXXXXXXXXXXXXXPKERGEIMMPSPAEDVXXXXXXXAHEEMSPSAQLVFGNXXXXXXXXSECVLSPVSAVSG--GAWGAPRDPPAVDGGSPGGSETAEVDMMDFLQEVGQQRLRDEAREEHATEAMTAVGTPVSAAGSVTGFARTPAGHPTEIGPDNNVVSGSSLQQQASVVPRPEGSAGGDSELSAMVEKDEDAVKDGLQRILHIRQTAQESVAADAAADAAKANDSVPGENGGDFRATLPAARMEAAAA-AVRTEPRLLA------------ATWSHIN-QDRSRQPRCGPKTPEERLKAIEDAKAALRSRVALRKA 533          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A6H5JVW4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW4_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 1.480e-79
Identity = 259/495 (52.32%), Postives = 288/495 (58.18%), Query Frame = 0
Query:   46 MRHAVLKTESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADEGIGDIPVPDLPAGTWDNFWA--AGXXXXXXXXXXXXXXXXXXXXXSSFTRTPS---------LRSVAKGISSREQLAREAXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAGATESWAGRXXXXXXXXXXXASLSPPSRLVFGAAGIGG------LLSPTAAISASSGTWGALLDPPAVDGQSVGGSETAELDMLDFLQEAGQQRLREEAREEVGLTPLVSGRTEACLFGLVVGLVRRRVGWLGETGREGSRRGSSDTRQAASPKEPAAPAXXXXXXXXXXXGRRIKSQGPASVFPSPSSADAKPSSGGGGSNFAATSPDRELGAAAN---PAA-RSEPRXXXXXXXXXXXXXXXSTWSQGGRQQRPEQPRE-PKTAEERLKDIEDAKAALRTRVALRKA 518
            MRHAVLKTE+V+VTGR HG VEA TLE+SKGALFLGKAMV SATVAGRLEGILVV DMLTMR SGHCDGVLRYGQLNVQHGGKLTGAVKA S AD GIGDIPVPDLP GTWD+FW    G     XXXXXXXXXXXXX    S  R            L S A G+S  E+     XXXXXXXXXXXXXXXXXXXXXXXX         E        XXXXXXX   +SP ++LVFG            +LSP +A+S   G WGA  DPPAVDG+S GGSETAE+DM+DFLQE GQQRLREEAREE     + +  T     G V G  R       + G         D    +   +  A                + +   A       + D+ P   GGG      +   E  AAA    PAA R+ PR               +TWS      R +QPR  PKT EERLK IEDAKAALR+RVALRKA
Sbjct:    1 MRHAVLKTENVIVTGRLHGNVEAKTLEISKGALFLGKAMVDSATVAGRLEGILVVGDMLTMRSSGHCDGVLRYGQLNVQHGGKLTGAVKAASPADVGIGDIPVPDLPPGTWDHFWGKRGGGRAEGXXXXXXXXXXXXXGKSPSLRRVSGPLQTENVAQLESAAAGVSGEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIMMPSPAEXXX-----XXXXXXXHEEMSPSAQLVFGNXXXXXXXXSECVLSPVSAVSG--GAWGAPRDPPAVDGRSPGGSETAEVDMMDFLQEVGQQRLREEAREEHATEAMTAVGTPVSAAGSVTGFARTPARHPMDVG--------PDNNVVSGSLQQQADGLQRILHIRRTAQESVAADAAADAA---KANDSVPRDNGGGFRANLPAARTEAAAAAGGPAPAAVRTLPRLLA------------ATWSHIN-PDRSKQPRGGPKTPEERLKAIEDAKAALRSRVALRKA 464          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: UPI0018724465 (polymer-forming cytoskeletal protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018724465)

HSP 1 Score: 68.9 bits (167), Expect = 2.340e-10
Identity = 31/86 (36.05%), Postives = 55/86 (63.95%), Query Frame = 0
Query:   54 ESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDA 139
            + ++V G+   ++EA+ L + +G ++ GKA+V+SA++ GR +G L V  +LT++  G   G LRY  L ++ GG+L+G +    DA
Sbjct:   38 DKLIVEGKVEASLEAAELTVREGGVYHGKAVVKSASIDGRFDGDLTVDGLLTIQAGGRVSGALRYRDLKIERGGRLSGDIDLLDDA 123          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A286GAA9_9PROT (Protein CcmA, bactofilin family n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286GAA9_9PROT)

HSP 1 Score: 71.2 bits (173), Expect = 2.830e-10
Identity = 33/96 (34.38%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   46 MRHAVLKTESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADE 141
            ++  +   +++VV G     +++  + ++KG +F GK  V +A VAG  +G L V D L +R +G   G +RYG L V+HGG+L+G+++  S+A++
Sbjct:  105 LKGEIAACDTLVVEGTIEAAMDSHHIAIAKGGVFSGKVTVDTAEVAGAFDGDLTVRDRLLVRATGSISGTVRYGALEVEHGGRLSGSLELLSEAEK 200          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A3N1L1M1_9PROT (Cytoskeletal protein CcmA (Bactofilin family) n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1L1M1_9PROT)

HSP 1 Score: 70.5 bits (171), Expect = 3.430e-10
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 0
Query:   54 ESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADE 141
            + +VV GR   T+ +  +E+S   LF G A +  A V GR EG L+V   L +  +G   G +RYGQL V+ GG+L+G +++TSD D+
Sbjct:  107 DKLVVEGRVEATLTSRVIEISDTGLFKGSAEIDEAEVRGRFEGDLIVRKRLFIGATGRVSGKVRYGQLEVEAGGQLSGDIRSTSDDDD 194          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A6N6VHR0_9HYPH (Polymer-forming cytoskeletal protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VHR0_9HYPH)

HSP 1 Score: 68.9 bits (167), Expect = 8.040e-10
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 0
Query:   30 FSAVDDPSLNVVVRGVMRHAVLKT-ESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKA 135
            +SA   P+   V RG+     +++ +S+V+ G    T+E+ TL +S+     G+A V  A + GR +G LVV   LT+  +G   G +RYG+L V+ GG+LTG V+A
Sbjct:   63 YSANATPANLHVGRGLRLEGKIESCDSLVIEGDVQATIESGTLTISETGEVRGEATVDQAEIQGRFDGTLVVRKCLTINATGKVTGTIRYGELKVEQGGRLTGQVEA 169          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: UPI0003FA0BD4 (polymer-forming cytoskeletal protein n=2 Tax=Inquilinus TaxID=171673 RepID=UPI0003FA0BD4)

HSP 1 Score: 65.1 bits (157), Expect = 1.350e-8
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   54 ESVVVTGRFHGTV-EASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADEGIGDIPVP 149
            + +VV GR    + +  T+E+++  +F G A +R   +AGR EG L VS +L +R SG   G ++YG+L V+ GGKL G ++     D G  +IP P
Sbjct:   66 DHLVVEGRIEAKIKDCQTIEIAEQGVFKGSAEIRDGDIAGRFEGDLSVSGLLRLRASGVVTGTIKYGELQVETGGKLIGTLQPLG-GDAGH-EIPAP 160          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A2E8XTN8_9PROT (Cell shape determination protein CcmA n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XTN8_9PROT)

HSP 1 Score: 63.5 bits (153), Expect = 3.290e-8
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0
Query:   54 ESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAV 133
            +++ V G    T+    LE+++G  F G A V  A + G  EG L VS +L +R SGH  G ++YG++ V+ GG+++G V
Sbjct:   61 DTLAVEGTMDATLVGEVLEIAEGGQFTGTATVSEAQIHGHFEGDLTVSGVLQIRSSGHVTGTIKYGRIEVESGGEISGNV 140          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A4R6WWR0_9PROT (Cytoskeletal protein CcmA (Bactofilin family) n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WWR0_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 1.370e-7
Identity = 35/107 (32.71%), Postives = 62/107 (57.94%), Query Frame = 0
Query:   40 VVVRGVMRHAVLKT-ESVVVTGRFHGTV-EASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADEGIG 144
            +V R +  +  ++T +S+VV G+    + +   +E++    F G A + SA ++GR +G LVV   LT+R SG   G +RYGQL V+ GG ++G ++  +++    G
Sbjct:   75 IVGRDIFLNGEIRTCDSLVVEGKVEAVLSDCRAMEIAGSGEFRGSAEIESADISGRFDGDLVVRQRLTIRASGKVMGKIRYGQLEVERGGIISGTIEGLAESQAASG 181          
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Match: A0A211ZMS9_9PROT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A211ZMS9_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 2.000e-7
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   54 ESVVVTGRFHGTV-EASTLELSKGALFLGKAMVRSATVAGRLEGILVVSDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVK 134
            + +VV GR    + +  T+E+++  +F G A +    +AGR EG L VS +L +R SG   G ++YG+L V+ GGKL G ++
Sbjct:   65 DHLVVEGRIEAKIKDCQTIEIAEQGVFKGSAEISDGDIAGRFEGDLSVSGLLRLRASGVVTGTIKYGELQVETGGKLIGTLQ 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1222.1909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK9_ECTSI7.920e-9954.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVW4_9PHAE1.480e-7952.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI00187244652.340e-1036.05polymer-forming cytoskeletal protein n=1 Tax=Pelag... [more]
A0A286GAA9_9PROT2.830e-1034.38Protein CcmA, bactofilin family n=1 Tax=Caenispiri... [more]
A0A3N1L1M1_9PROT3.430e-1040.91Cytoskeletal protein CcmA (Bactofilin family) n=1 ... [more]
A0A6N6VHR0_9HYPH8.040e-1037.38Polymer-forming cytoskeletal protein n=1 Tax=Parvi... [more]
UPI0003FA0BD41.350e-838.14polymer-forming cytoskeletal protein n=2 Tax=Inqui... [more]
A0A2E8XTN8_9PROT3.290e-837.50Cell shape determination protein CcmA n=1 Tax=Alph... [more]
A0A4R6WWR0_9PROT1.370e-732.71Cytoskeletal protein CcmA (Bactofilin family) n=1 ... [more]
A0A211ZMS9_9PROT2.000e-737.80Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 53..133
e-value: 8.5E-11
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1222contigH-canaliculatus_F_contig1222:17433..27988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1222.1909.1mRNA_H-canaliculatus_F_contig1222.1909.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1222 17433..27988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1222.1909.1 ID=prot_H-canaliculatus_F_contig1222.1909.1|Name=mRNA_H-canaliculatus_F_contig1222.1909.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=519bp
MRRSRATPKGEVNGDDPGEMVVGTGVTMDFSAVDDPSLNVVVRGVMRHAV
LKTESVVVTGRFHGTVEASTLELSKGALFLGKAMVRSATVAGRLEGILVV
SDMLTMRGSGHCDGVLRYGQLNVQHGGKLTGAVKATSDADEGIGDIPVPD
LPAGTWDNFWAAGGGGAGGGGGGGGREQSSSSSASSFTRTPSLRSVAKGI
SSREQLAREAAASGAAGGGGARPGGGGGGGGGGAAGGEAAGATESWAGRG
HGGGGAGSGSASLSPPSRLVFGAAGIGGLLSPTAAISASSGTWGALLDPP
AVDGQSVGGSETAELDMLDFLQEAGQQRLREEAREEVGLTPLVSGRTEAC
LFGLVVGLVRRRVGWLGETGREGSRRGSSDTRQAASPKEPAAPAPGGGGG
GGGGDGRRIKSQGPASVFPSPSSADAKPSSGGGGSNFAATSPDRELGAAA
NPAARSEPRLLTSPRLLASPRLLASTWSQGGRQQRPEQPREPKTAEERLK
DIEDAKAALRTRVALRKAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B