prot_H-canaliculatus_F_contig12208.1896.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12208.1896.1
Unique Nameprot_H-canaliculatus_F_contig12208.1896.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length197
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12208.1896.1 vs. uniprot
Match: D7G0S1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S1_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 9.020e-5
Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0 
Query:   12 RIEVGEELRYPCTMTSIYGGSVLSLGMDGSLLIAPEARAKWIEA---TVEEAITVTTTVLLDRMLVNRHLNKELLWSLLGEIDEVDE--IKVKTL-AGPTADAVLALLRR 115
            R EVGEELRYP +MTS   GSVLS+G DG+LL A E R         TV EA      +       + H  K  +  +  +  + D   ++ KTL A   A A+ AL+RR
Sbjct:   17 RNEVGEELRYPPSMTSRMDGSVLSMGADGTLLHATEDRQNHFRLEMKTVVEAAEAAEDL-------DEHETKTAVPDITADSVDPDNERLQPKTLVAADPATAIAALMRR 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12208.1896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0S1_ECTSI9.020e-539.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12208contigH-canaliculatus_F_contig12208:1013..3448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12208.1896.1mRNA_H-canaliculatus_F_contig12208.1896.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12208 1013..3450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12208.1896.1 ID=prot_H-canaliculatus_F_contig12208.1896.1|Name=mRNA_H-canaliculatus_F_contig12208.1896.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=197bp
TSSQRRHQSPARIEVGEELRYPCTMTSIYGGSVLSLGMDGSLLIAPEARA
KWIEATVEEAITVTTTVLLDRMLVNRHLNKELLWSLLGEIDEVDEIKVKT
LAGPTADAVLALLRRKFSAMEGRDRERSTGVRATSSAAGAAVAALEAASA
SPSSQPHAGHPGTSTGRPSGVGESPPPPPSQEWGDDVVLRITTTGSL
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