prot_H-canaliculatus_F_contig12187.1880.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12187.1880.1
Unique Nameprot_H-canaliculatus_F_contig12187.1880.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length190
Homology
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A6H5J7B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 6.210e-46
Identity = 98/156 (62.82%), Postives = 111/156 (71.15%), Query Frame = 0
Query:    1 GAKKAAAEGAAGLLGGQPSVLGLSQRLVAKGLAPNASQANSXXXXXXXXXXXXXXXXXXXXXXXXXXGAARI---GDRLVGEELFQVALADLAYVHLGLNDPVSALTFAGRLLDAKPSAVNAHLAHLYAAEALCLLGRPAEALQHLAPVSENGCSA 153
            G KKAAA GAAGLLGGQPSVLG+S RLVAKGLAP+                                GAA     GD ++ EEL++VALADLAYVHLGL+DPVSALT+AGRLL+  PSAV+ HLAHLYAAEALCLLGRPAEAL+HL+P+SENGCSA
Sbjct:  288 GVKKAAAAGAAGLLGGQPSVLGMSTRLVAKGLAPS------------------------NRVDGGGAGAATPAGDGDSMMTEELYRVALADLAYVHLGLDDPVSALTYAGRLLETNPSAVSTHLAHLYAAEALCLLGRPAEALEHLSPISENGCSA 419          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: D7FLM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM7_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.420e-44
Identity = 106/153 (69.28%), Postives = 120/153 (78.43%), Query Frame = 0
Query:    1 GAKKAAAEGAAGLLGGQPSVLGLSQRLVAKGLAPNASQANSXXXXXXXXXXXXXXXXXXXXXXXXXXGAARIGDRLVGEELFQVALADLAYVHLGLNDPVSALTFAGRLLDAKPSAVNAHLAHLYAAEALCLLGRPAEALQHLAPVSENGCSA 153
            G KKAAA GAAGLLGGQPSVLG+S RLVAKGLAP+ +     XXXXXXXXXXX                A  GD ++ EEL++VALADLAYVHLGL+DPVSALT+AGRLL+  PSAV+ HLAHLYAAEALCLLGRPAEAL+HL+P+SEN CSA
Sbjct:  656 GVKKAAAAGAAGLLGGQPSVLGMSTRLVAKGLAPSNNAEGGHXXXXXXXXXXXAATP------------AGDGDSVMAEELYRVALADLAYVHLGLDDPVSALTYAGRLLETNPSAVSTHLAHLYAAEALCLLGRPAEALEHLSPISENACSA 796          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A836CBQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.250e-8
Identity = 46/100 (46.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   69 AARIGDRLVGEELFQVALADLAYVHLGLNDPVSALTFAGRLLDAKPS--------------AVNAHLAHLYAAEALCLLGRPAEALQHLAPVSENGCSAA 154
            AA   DR   E + Q AL  LAYVHLGL+DPV AL +A RLL    S              A +A LA +Y+AEAL LL RP  AL+ L P  E   +AA
Sbjct:  680 AAAAWDR---EPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAA 776          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: UPI00125DE581 (CCR4-NOT transcription complex subunit 10-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125DE581)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-7
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   75 RLVGEELFQVALADLAYVHLGLNDPVSALTFAGRLLDA-KPSAVNAHLAHLYAAEALCLLGRPAEALQHLAPVSENG 150
            R   + L Q  LADLAYVHL L DP+ AL+ A  LL   + S +   L ++YAAEALCLL RP EA +HL+     G
Sbjct:  665 RKENQMLEQALLADLAYVHLELGDPLRALSTARSLLKLIECSKIYTFLGNVYAAEALCLLSRPKEAAEHLSMYLSGG 741          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: UPI0010A40499 (CCR4-NOT transcription complex subunit 10-like isoform X1 n=5 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A40499)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-7
Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   83 QVALADLAYVHLGLNDPVSALTFAGRLLDAKP-SAVNAHLAHLYAAEALCLLGRPAEALQHL 143
            QVALA+LAYV L L++PV AL+ A  LL+    S +   L H+Y+AEALCLL RP EA +HL
Sbjct:  672 QVALANLAYVELELDNPVKALSVATSLLELPECSRIYLFLGHVYSAEALCLLNRPKEAAEHL 733          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A7C9EWQ1_OPUST (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9EWQ1_OPUST)

HSP 1 Score: 59.7 bits (143), Expect = 3.890e-7
Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   75 RLVGEELFQVALADLAYVHLGLNDPVSALTFAGRLLDAKP-SAVNAHLAHLYAAEALCLLGRPAEALQHL 143
            R   E+L Q  L DLAYV L L +P+ AL+ A  L      S + A LAHLYAAEALCLL RP EA +HL
Sbjct:  297 RRENEKLKQTILIDLAYVELELGNPLKALSAALSLQKLPECSRMYAFLAHLYAAEALCLLNRPKEAAEHL 366          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: L8HDZ7_ACACA (Tetratricopeptide repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDZ7_ACACA)

HSP 1 Score: 59.3 bits (142), Expect = 5.860e-7
Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = 0
Query:   84 VALADLAYVHLGLNDPVSALTFAGRLLD--------------AKPSAV---NAH--LAHLYAAEALCLLGRPAEALQHLAP 145
            V L  +AY+ L L DPV AL  AG  L+              A P+A    + H  LAHLYAAEALC+L RPAEA+QHL+P
Sbjct:  559 VCLLSMAYIALALEDPVVALAAAGAALNVGARSTASAPNGTAASPTAAVIDDEHRLLAHLYAAEALCMLNRPAEAMQHLSP 639          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A7N1A7J1_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A7J1_KALFE)

HSP 1 Score: 58.5 bits (140), Expect = 1.030e-6
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   83 QVALADLAYVHLGLNDPVSALTFAGRLLDAKPSA-VNAHLAHLYAAEALCLLGRPAEALQHL 143
            Q    DLAYV L L +PV AL+ A  LL+    A +   L H+YAAEALCLLGRP EA +H+
Sbjct:  436 QTLFGDLAYVELELGNPVKALSAAKSLLEIPNCAKIYVFLGHVYAAEALCLLGRPKEAAEHM 497          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A1J3J284_NOCCA (CCR4-NOT transcription complex subunit 10 n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3J284_NOCCA)

HSP 1 Score: 58.2 bits (139), Expect = 1.450e-6
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   83 QVALADLAYVHLGLNDPVSALTFAGRLLDAKP-SAVNAHLAHLYAAEALCLLGRPAEALQHL 143
            Q  LA++AYV L L +P+ AL+ A  LL     S +   L H+YAAEALCLL RP EA+ HL
Sbjct:  597 QALLANMAYVELELENPIKALSAANSLLQVPDCSKIYVFLGHIYAAEALCLLNRPVEAVTHL 658          
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Match: A0A1S3Y793_TOBAC (CCR4-NOT transcription complex subunit 10-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Y793_TOBAC)

HSP 1 Score: 57.8 bits (138), Expect = 2.000e-6
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   83 QVALADLAYVHLGLNDPVSALTFAGRLLDAKP-SAVNAHLAHLYAAEALCLLGRPAEALQHL 143
            Q  LADLA+V L L +P+ ALT A  LL  +  S +   L ++YAAEALCLL RP EA++HL
Sbjct:  666 QAVLADLAFVELELGNPLRALTIAKSLLKVQECSKIYIFLGNVYAAEALCLLNRPKEAVEHL 727          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12187.1880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5J7B5_9PHAE6.210e-4662.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLM7_ECTSI1.420e-4469.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBQ7_9STRA5.250e-846.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00125DE5811.300e-749.35CCR4-NOT transcription complex subunit 10-like n=2... [more]
UPI0010A404991.300e-756.45CCR4-NOT transcription complex subunit 10-like iso... [more]
A0A7C9EWQ1_OPUST3.890e-754.29Uncharacterized protein n=2 Tax=Opuntia streptacan... [more]
L8HDZ7_ACACA5.860e-748.15Tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A7N1A7J1_KALFE1.030e-653.23Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A1J3J284_NOCCA1.450e-651.61CCR4-NOT transcription complex subunit 10 n=5 Tax=... [more]
A0A1S3Y793_TOBAC2.000e-653.23CCR4-NOT transcription complex subunit 10-like n=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039740CCR4-NOT transcription complex subunit 10PANTHERPTHR12979FAMILY NOT NAMEDcoord: 40..187
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 75..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12187contigH-canaliculatus_F_contig12187:1009..2839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12187.1880.1mRNA_H-canaliculatus_F_contig12187.1880.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12187 1009..2841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12187.1880.1 ID=prot_H-canaliculatus_F_contig12187.1880.1|Name=mRNA_H-canaliculatus_F_contig12187.1880.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
GAKKAAAEGAAGLLGGQPSVLGLSQRLVAKGLAPNASQANSSSSSSNNSG
QRSSNRNNADGGGGGAAGAARIGDRLVGEELFQVALADLAYVHLGLNDPV
SALTFAGRLLDAKPSAVNAHLAHLYAAEALCLLGRPAEALQHLAPVSENG
CSAAAAAAAASSAATDVWSSPSAASAASAAAAAAAAATAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039740CNOT10