mRNA_H-canaliculatus_F_contig1217.1872.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1217.1872.1
Unique NamemRNA_H-canaliculatus_F_contig1217.1872.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A6H5L4B6_9PHAE (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B6_9PHAE)

HSP 1 Score: 728 bits (1879), Expect = 2.200e-254
Identity = 357/359 (99.44%), Postives = 357/359 (99.44%), Query Frame = 1
Query:    1 QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLE SWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAE AQRKEDACKKWAVLEEKALSK
Sbjct:   95 QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLEPSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAEAAQRKEDACKKWAVLEEKALSK 453          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: D7FHE5_ECTSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE5_ECTSI)

HSP 1 Score: 671 bits (1730), Expect = 5.840e-232
Identity = 325/326 (99.69%), Postives = 326/326 (100.00%), Query Frame = 1
Query:    1 QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDR 978
            QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLI+LFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDR
Sbjct:   75 QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIDLFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDR 400          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A835ZAF4_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF4_9STRA)

HSP 1 Score: 613 bits (1581), Expect = 7.850e-210
Identity = 299/358 (83.52%), Postives = 327/358 (91.34%), Query Frame = 1
Query:    1 QPGEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALS 1074
            Q GEKM TE++YP IM MV+A+VCRALPP T DFDP+EDEP LE SWPHLQLVYEFFLRFVVSTEVNAKVAKK+ID +FC+QLIELFDSEDPRERDYLKTILHRIYGKFMNHRS IRKTIGNVF+RFVYETERHNG+GELLEILGSIINGFAIPLKKEHL FLQ+ALIPLHKPK V +YHQQLSYCIVQYVEKDP+TV+PVLRGLIRFWPWSCS+KQVLFLNELED+LELLMDEQLQQV   LF LLAQCL SQHFQVAERTLFLWNN+HLVSKGCFSR +T +ILPVIYGPL++HSLGHWN TVEGLAQNVLKMYMEFD+HL+DRVLSEH+K E E   +  DA K+W VLEE+A +
Sbjct:   63 QAGEKMFTEAMYPDIMGMVTASVCRALPPHTADFDPDEDEPRLEPSWPHLQLVYEFFLRFVVSTEVNAKVAKKHIDQRFCYQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSFIRKTIGNVFYRFVYETERHNGVGELLEILGSIINGFAIPLKKEHLSFLQRALIPLHKPKNVHVYHQQLSYCIVQYVEKDPDTVVPVLRGLIRFWPWSCSAKQVLFLNELEDILELLMDEQLQQVQGPLFALLAQCLGSQHFQVAERTLFLWNNDHLVSKGCFSRAHTTTILPVIYGPLYRHSLGHWNTTVEGLAQNVLKMYMEFDLHLFDRVLSEHIKAEEERKAKAADAEKRWTVLEEQAAT 420          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A6S9GHG6_HETAK (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GHG6_HETAK)

HSP 1 Score: 558 bits (1437), Expect = 5.090e-188
Identity = 266/357 (74.51%), Postives = 311/357 (87.11%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            G+K+ TE+L P +M  VSANV RALPP TDD+DPEEDEPVLE +WPHLQ+VYEFFLRF+VS+EVNAKVAKKY D KFC  L+ELFDSEDPRERDYLKTILHRIYGKFM+HRS IR+TI NVF+RFVYETERHNGIGELLEILGSIINGFAIPLKKEH+ FLQ+AL+PLHKPKCV++YHQQLSYC+VQYVEKD +T +PVL+GL+RFWPWSCS+KQV+FLNELE++LEL+  EQLQQV   LF L+A+CL S HFQVAER LFLWNNE LV+ GC SR Y  S+LP+IYGPL++HS GHWN+TVEGLAQNVLKMYME+DI+LYD+  +++ KLE E  ++ E A KKWA LE  A +K
Sbjct:   64 GQKIFTEALMPDVMACVSANVVRALPPQTDDYDPEEDEPVLEPAWPHLQVVYEFFLRFIVSSEVNAKVAKKYTDQKFCLALVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRTISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHVQFLQRALVPLHKPKCVAMYHQQLSYCVVQYVEKDADTGVPVLQGLVRFWPWSCSNKQVVFLNELEEILELVSAEQLQQVEGPLFKLVAKCLGSNHFQVAERALFLWNNEQLVNSGCLSRAYAQSLLPLIYGPLYRHSAGHWNSTVEGLAQNVLKMYMEYDINLYDKCSTDYFKLEEERKRKLEQAEKKWAQLEAMANAK 420          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A7S2V448_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V448_9STRA)

HSP 1 Score: 553 bits (1424), Expect = 1.330e-185
Identity = 265/357 (74.23%), Postives = 310/357 (86.83%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            G+K+ TE+L P IM  V AN+CRALPP TDD+DPEEDEPVLE +WPHLQ+VYEFFLRF+VS+EVNAKVAKKY+D +FC  L+ELFDSEDPRERDYLKTILHRIYGKFM+HRS IR++I NVF+RFVYETERHNGIGELLEILGSIINGFAIPLKKEH +FLQ+ALIPLHKPKCV++YHQQLSYCIVQYVEKD +T +PVL+GL+RFWPWS S+KQV+F+NELE++LEL+  EQL QV   LF L+A+CL SQHFQVAER LFLWNNE LV+ GC SR Y  SILP+IYGPL+ HS GHWN+TVEGLAQNVLKMYME+DI+LYDR  +E+ +LE E  ++ E A ++WA LE  A SK
Sbjct:  105 GQKIFTEALMPDIMACVVANICRALPPQTDDYDPEEDEPVLEPAWPHLQVVYEFFLRFIVSSEVNAKVAKKYVDQRFCLNLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRSISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHKVFLQRALIPLHKPKCVNMYHQQLSYCIVQYVEKDVDTAVPVLQGLVRFWPWSSSAKQVVFINELEEILELVGHEQLLQVEQPLFKLIAKCLGSQHFQVAERALFLWNNEQLVNSGCLSRQYASSILPLIYGPLYTHSSGHWNSTVEGLAQNVLKMYMEYDINLYDRCSTEYFRLEEERKRKLEQAQQRWAQLEALANSK 461          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: D0N579_PHYIT (Serine/threonine protein phosphatase 2A regulatory subunit n=38 Tax=Peronosporaceae TaxID=4777 RepID=D0N579_PHYIT)

HSP 1 Score: 548 bits (1413), Expect = 1.700e-183
Identity = 259/357 (72.55%), Postives = 305/357 (85.43%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            G+K+ TE+L P IM MVS N+CRALPP T+DFDPEEDEPVLE SWPHLQ+VYEFFLRF+VS+EVNAKVAKKY+D KFC  +I+LFDSEDPRERDYLKTILHRIYGKFM+HRS IRK I NVF+RFVYETERHNG+GELLEILGSIINGFA+PLK EHL FL +AL+PLHKPKCVS+YHQQLSYCI QYVEKDPET +P+++G+I++WPWSCSSKQV+FLNELE++LEL+  EQLQQVH  LF+ LA+ L SQHFQV+ER+LFLWNNEHLV+ GC S+ + H ILPVIYGPLH++SLGHWN TVEGLAQNVLK+YM++D+ LYD+   E+   E   A  K    +KW  +E  A SK
Sbjct:  132 GQKIFTETLMPDIMAMVSLNICRALPPQTEDFDPEEDEPVLEASWPHLQVVYEFFLRFIVSSEVNAKVAKKYVDQKFCLSIIDLFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAISNVFYRFVYETERHNGVGELLEILGSIINGFAMPLKAEHLQFLVRALVPLHKPKCVSMYHQQLSYCITQYVEKDPETAVPIIQGIIKYWPWSCSSKQVIFLNELEEILELMGSEQLQQVHKPLFNGLAKWLGSQHFQVSERSLFLWNNEHLVNNGCLSKQHAHLILPVIYGPLHRNSLGHWNTTVEGLAQNVLKLYMDYDMALYDQCAKEYSLKEQAMADTKNKEQEKWRKIESMAASK 488          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: K3XB75_GLOUD (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB75_GLOUD)

HSP 1 Score: 543 bits (1399), Expect = 1.100e-181
Identity = 255/357 (71.43%), Postives = 303/357 (84.87%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            G+K+ TE+L P IM MVSAN+CR+LPP T+DFDPEEDEPVLE SWPHLQ+VYEFFLRF+VS EVNAKVAKK++D KFC  +IELFDSEDPRERDYLKTILHRIYGKFM+HRS IRK I NVF+RFVYETERHNG+GELLEILGSIINGFA+PLK EHL FL +AL+PLHKPKCVS+YHQQLSYCI QYVEKDPET +P+++G++RFWPWSCSSKQV+FLNELE++LEL+  +QLQQVH  LF  LA+ L SQHFQV+ER+LFLWNNEHLV+ GC S+ + H ILPVIYGPLH++SLGHWN TVEGLAQNVLK+YM++D+ LYD+   ++   E    ++     +KW  +E  A  K
Sbjct:  113 GQKIFTEALMPDIMAMVSANICRSLPPQTEDFDPEEDEPVLEASWPHLQVVYEFFLRFIVSGEVNAKVAKKFVDQKFCLSIIELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAISNVFYRFVYETERHNGVGELLEILGSIINGFAMPLKAEHLQFLVRALVPLHKPKCVSMYHQQLSYCITQYVEKDPETAVPIIQGILRFWPWSCSSKQVIFLNELEEILELMGSDQLQQVHKPLFQALAKWLGSQHFQVSERSLFLWNNEHLVNNGCLSKQHAHLILPVIYGPLHRNSLGHWNTTVEGLAQNVLKLYMDYDMALYDQCAKDYSMKEQSQNEKXXXXEEKWRKIESMAAMK 469          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A485LJQ3_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LJQ3_9STRA)

HSP 1 Score: 543 bits (1400), Expect = 2.010e-181
Identity = 256/357 (71.71%), Postives = 304/357 (85.15%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKALSK 1077
            G+K+ TE+L P IM MVSAN+CRALPP T+DFDPEEDEPVLE SWPHLQ+VYEFFLRF+VS EVNAKVAKK++D KFC  +IELFDSEDPRERDYLKTILHRIYGKFM+HRS IRK I NVF+RFVYETERHNGIGELLEILGSIINGFA+PLK+EHL FL KAL+PLHKPKCVSLYHQQLSYCI QYVEKDPET +P++ G+++FWPW+CSSKQVLFLNELE++LEL+  +QL Q+H  LF +L++CL SQHFQV+ER LFLWNNEHLV+ GC SR +   ILPVIYGPL+K+SLGHWN TVEGLAQNVLK+YM++D+ L+D+   ++L  E    ++     +KW  +E  A +K
Sbjct:  139 GQKIFTEALMPDIMGMVSANICRALPPQTEDFDPEEDEPVLEPSWPHLQVVYEFFLRFIVSGEVNAKVAKKFVDQKFCLNVIELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAISNVFYRFVYETERHNGIGELLEILGSIINGFAMPLKREHLQFLVKALVPLHKPKCVSLYHQQLSYCITQYVEKDPETAIPIISGIVKFWPWACSSKQVLFLNELEEILELMGPDQLTQIHKDLFRVLSKCLGSQHFQVSERALFLWNNEHLVNNGCLSRQHASLILPVIYGPLYKNSLGHWNTTVEGLAQNVLKLYMDYDMALFDKCAKDYLAKEERVVEKVNAQAEKWKKIELMAEAK 495          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A7S2PFY6_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFY6_9STRA)

HSP 1 Score: 538 bits (1387), Expect = 1.220e-179
Identity = 257/354 (72.60%), Postives = 298/354 (84.18%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKA 1068
            G+K+ TE++ P +M MVSANVCRALPPATDDFDPEEDEPVLE +WPHLQ+ YEFFLRF+VS+EVNAK A+KY+D KFC QL+ELFDSEDPRERDYLKTILHRIYGKFM+HRS IR+ I NVF+RFVYETERHNGIGELLEILGSIINGFAIPLKKEHL FL +ALIPLHKPKCV LYHQQLSYCI+QYVEKD +T  P+L G  + WPWSCS+KQ+LFLNELE++LELL  +QL Q+ + LF  LA+CL S HFQV ERTLFLWNNEHLV+ GC SR    ++LP+IYGPL+K+S GHWN TVEGLAQNV+KMYME+D+ LYDR  + H KLE ET  + E   K+W  +E  A
Sbjct:  127 GQKIFTEAIMPDLMAMVSANVCRALPPATDDFDPEEDEPVLEPAWPHLQVAYEFFLRFIVSSEVNAKSARKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLQFLVRALIPLHKPKCVGLYHQQLSYCIIQYVEKDADTATPILSGFFKCWPWSCSAKQILFLNELEEILELLGADQLAQISNTLFVNLARCLNSDHFQVVERTLFLWNNEHLVNSGCLSRLNAQTVLPIIYGPLYKNSSGHWNATVEGLAQNVMKMYMEYDLALYDRCQAAHFKLEEETELKIEAVSKRWLEIEAMA 480          
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Match: A0A7S4JT48_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4JT48_9STRA)

HSP 1 Score: 533 bits (1374), Expect = 3.050e-177
Identity = 255/354 (72.03%), Postives = 295/354 (83.33%), Query Frame = 1
Query:    7 GEKMLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYEFFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRIYGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTVEGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEKA 1068
            G+K+ TES+   +M MVSANVCRALPPATDDFDPEEDEPVLE +WPHLQ+ YEFFLRF+VS+EVNAK AKKY+D +FC QL+ELFDSEDPRERDYLKTILHRIYGKFM+HRS IR+ I NVF+RFVYETERHNGIGELLEILGSIINGFAIPLKKEHL FL +ALIPLHKPKCV LYHQQLSYCI+QYVEKD +T  P+L G  +FWPWSCS KQVLFLNELE++LELL  +QL Q+   LF  LA+CL S HFQV ER LFLWNNEHLV+ GC SR    ++LP+IYGPL+K+S GHWN TVEGLAQNVLKMYME+D+ LYD+  + + K E E  ++ E    +W+ +EE A
Sbjct:  158 GQKIFTESVMADLMAMVSANVCRALPPATDDFDPEEDEPVLEPAWPHLQVAYEFFLRFIVSSEVNAKAAKKYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLQFLVRALIPLHKPKCVGLYHQQLSYCIIQYVEKDADTATPILNGFFKFWPWSCSGKQVLFLNELEEILELLGADQLAQISKTLFTNLARCLDSDHFQVVERALFLWNNEHLVNSGCLSRLNAQTVLPIIYGPLYKNSSGHWNATVEGLAQNVLKMYMEYDLVLYDKCTTAYFKEEEEAKRKIEAIADRWSAIEEMA 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1217.1872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4B6_9PHAE2.200e-25499.44Serine/threonine protein phosphatase 2A regulatory... [more]
D7FHE5_ECTSI5.840e-23299.69Serine/threonine protein phosphatase 2A regulatory... [more]
A0A835ZAF4_9STRA7.850e-21083.52Serine/threonine protein phosphatase 2A regulatory... [more]
A0A6S9GHG6_HETAK5.090e-18874.51Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7S2V448_9STRA1.330e-18574.23Serine/threonine protein phosphatase 2A regulatory... [more]
D0N579_PHYIT1.700e-18372.55Serine/threonine protein phosphatase 2A regulatory... [more]
K3XB75_GLOUD1.100e-18171.43Serine/threonine protein phosphatase 2A regulatory... [more]
A0A485LJQ3_9STRA2.010e-18171.71Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7S2PFY6_9STRA1.220e-17972.60Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7S4JT48_9STRA3.050e-17772.03Serine/threonine protein phosphatase 2A regulatory... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1217contigH-canaliculatus_F_contig1217:18622..27138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score661.0
Seed ortholog evalue3.1e-187
Seed eggNOG ortholog2880.D7FHE5
KEGG koko:K11584
KEGG Pathwayko03015,ko04071,ko04113,ko04114,ko04151,ko04152,ko04261,ko04728,ko05165,map03015,map04071,map04113,map04114,map04151,map04152,map04261,map04728,map05165
GOsGO:0000096,GO:0000159,GO:0000902,GO:0000904,GO:0002682,GO:0002683,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005777,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008287,GO:0009058,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009653,GO:0009759,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010026,GO:0010090,GO:0010565,GO:0010646,GO:0010648,GO:0016043,GO:0016143,GO:0016144,GO:0017144,GO:0018130,GO:0019216,GO:0019217,GO:0019220,GO:0019222,GO:0019438,GO:0019748,GO:0019752,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0023051,GO:0023057,GO:0030154,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0031998,GO:0032000,GO:0032502,GO:0032989,GO:0032991,GO:0033353,GO:0034641,GO:0042278,GO:0042325,GO:0042343,GO:0042430,GO:0042435,GO:0042579,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045088,GO:0045824,GO:0045834,GO:0045923,GO:0046128,GO:0046320,GO:0046321,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0048869,GO:0050776,GO:0050777,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050994,GO:0050996,GO:0051174,GO:0051186,GO:0055086,GO:0062012,GO:0062013,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0080090,GO:0080134,GO:0080183,GO:0090342,GO:0090558,GO:0090626,GO:0097159,GO:1900457,GO:1900458,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901657,GO:1901659,GO:1902494,GO:1903293,GO:2000377
EggNOG free text desc.protein phosphatase regulator activity
EggNOG OGsKOG2085@1,KOG2085@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036
Hectar predicted targeting categoryother localisation
Exons12
Model size2876
Cds size1065
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1217.1872.1prot_H-canaliculatus_F_contig1217.1872.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1217 20442..27123 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928930.0662467-UTR-H-canaliculatus_F_contig1217:18621..198231622928930.0662467-UTR-H-canaliculatus_F_contig1217:18621..19823Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 18622..19823 -
1696845616.7398047-UTR-H-canaliculatus_F_contig1217:18621..198231696845616.7398047-UTR-H-canaliculatus_F_contig1217:18621..19823Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 18622..19823 -
1622928930.0812223-UTR-H-canaliculatus_F_contig1217:19834..202731622928930.0812223-UTR-H-canaliculatus_F_contig1217:19834..20273Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 19835..20273 -
1696845616.7555308-UTR-H-canaliculatus_F_contig1217:19834..202731696845616.7555308-UTR-H-canaliculatus_F_contig1217:19834..20273Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 19835..20273 -
1622928930.0922036-UTR-H-canaliculatus_F_contig1217:20286..204411622928930.0922036-UTR-H-canaliculatus_F_contig1217:20286..20441Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 20287..20441 -
1696845616.7648964-UTR-H-canaliculatus_F_contig1217:20286..204411696845616.7648964-UTR-H-canaliculatus_F_contig1217:20286..20441Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 20287..20441 -
1622928930.2647686-UTR-H-canaliculatus_F_contig1217:27123..271381622928930.2647686-UTR-H-canaliculatus_F_contig1217:27123..27138Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 27124..27138 -
1696845616.9310966-UTR-H-canaliculatus_F_contig1217:27123..271381696845616.9310966-UTR-H-canaliculatus_F_contig1217:27123..27138Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1217 27124..27138 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928930.1054254-CDS-H-canaliculatus_F_contig1217:20441..204711622928930.1054254-CDS-H-canaliculatus_F_contig1217:20441..20471Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 20442..20471 -
1696845616.7766223-CDS-H-canaliculatus_F_contig1217:20441..204711696845616.7766223-CDS-H-canaliculatus_F_contig1217:20441..20471Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 20442..20471 -
1622928930.115885-CDS-H-canaliculatus_F_contig1217:21277..213501622928930.115885-CDS-H-canaliculatus_F_contig1217:21277..21350Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 21278..21350 -
1696845616.7952056-CDS-H-canaliculatus_F_contig1217:21277..213501696845616.7952056-CDS-H-canaliculatus_F_contig1217:21277..21350Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 21278..21350 -
1622928930.1528254-CDS-H-canaliculatus_F_contig1217:21751..218571622928930.1528254-CDS-H-canaliculatus_F_contig1217:21751..21857Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 21752..21857 -
1696845616.8170202-CDS-H-canaliculatus_F_contig1217:21751..218571696845616.8170202-CDS-H-canaliculatus_F_contig1217:21751..21857Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 21752..21857 -
1622928930.1638913-CDS-H-canaliculatus_F_contig1217:22715..228151622928930.1638913-CDS-H-canaliculatus_F_contig1217:22715..22815Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 22716..22815 -
1696845616.8318744-CDS-H-canaliculatus_F_contig1217:22715..228151696845616.8318744-CDS-H-canaliculatus_F_contig1217:22715..22815Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 22716..22815 -
1622928930.1759963-CDS-H-canaliculatus_F_contig1217:23303..233691622928930.1759963-CDS-H-canaliculatus_F_contig1217:23303..23369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 23304..23369 -
1696845616.843224-CDS-H-canaliculatus_F_contig1217:23303..233691696845616.843224-CDS-H-canaliculatus_F_contig1217:23303..23369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 23304..23369 -
1622928930.1929085-CDS-H-canaliculatus_F_contig1217:24261..243571622928930.1929085-CDS-H-canaliculatus_F_contig1217:24261..24357Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 24262..24357 -
1696845616.8689306-CDS-H-canaliculatus_F_contig1217:24261..243571696845616.8689306-CDS-H-canaliculatus_F_contig1217:24261..24357Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 24262..24357 -
1622928930.2099361-CDS-H-canaliculatus_F_contig1217:24972..251691622928930.2099361-CDS-H-canaliculatus_F_contig1217:24972..25169Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 24973..25169 -
1696845616.884796-CDS-H-canaliculatus_F_contig1217:24972..251691696845616.884796-CDS-H-canaliculatus_F_contig1217:24972..25169Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 24973..25169 -
1622928930.2214425-CDS-H-canaliculatus_F_contig1217:25491..256371622928930.2214425-CDS-H-canaliculatus_F_contig1217:25491..25637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 25492..25637 -
1696845616.8956397-CDS-H-canaliculatus_F_contig1217:25491..256371696845616.8956397-CDS-H-canaliculatus_F_contig1217:25491..25637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 25492..25637 -
1622928930.232539-CDS-H-canaliculatus_F_contig1217:26152..262651622928930.232539-CDS-H-canaliculatus_F_contig1217:26152..26265Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 26153..26265 -
1696845616.9060566-CDS-H-canaliculatus_F_contig1217:26152..262651696845616.9060566-CDS-H-canaliculatus_F_contig1217:26152..26265Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 26153..26265 -
1622928930.2496083-CDS-H-canaliculatus_F_contig1217:26985..271231622928930.2496083-CDS-H-canaliculatus_F_contig1217:26985..27123Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 26986..27123 -
1696845616.9182606-CDS-H-canaliculatus_F_contig1217:26985..271231696845616.9182606-CDS-H-canaliculatus_F_contig1217:26985..27123Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1217 26986..27123 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1217.1872.1

>prot_H-canaliculatus_F_contig1217.1872.1 ID=prot_H-canaliculatus_F_contig1217.1872.1|Name=mRNA_H-canaliculatus_F_contig1217.1872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=355bp
MLTESLYPCIMQMVSANVCRALPPATDDFDPEEDEPVLELSWPHLQLVYE
FFLRFVVSTEVNAKVAKKYIDHKFCFQLIELFDSEDPRERDYLKTILHRI
YGKFMNHRSHIRKTIGNVFFRFVYETERHNGIGELLEILGSIINGFAIPL
KKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGL
IRFWPWSCSSKQVLFLNELEDVLELLMDEQLQQVHDKLFHLLAQCLASQH
FQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYGPLHKHSLGHWNNTV
EGLAQNVLKMYMEFDIHLYDRVLSEHLKLEAETAQRKEDACKKWAVLEEK
ALSK*
back to top

mRNA from alignment at H-canaliculatus_F_contig1217:18622..27138-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1217.1872.1 ID=mRNA_H-canaliculatus_F_contig1217.1872.1|Name=mRNA_H-canaliculatus_F_contig1217.1872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8517bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1217:18622..27138- (Hapterophycus canaliculatus Oshoro5f female)
CAGCCGGGGGAGAAGATGCTGACGGAGTCGTTGTATCCGTGCATCATGCA GATGGTGTCGGCGAACGTGTGTCGAGCGTTGCCCCCAGCGACCGACGATT TCGACCCAGAGGAGGACGAGCCGGTGTTGGAGTTGTCGTGGCCGCACCTG CAGGTGCGAAGGAAGCGCGTTGCATGCATGCGCCCGCGTCGCCCAAGACG TCGTGGTTCCTTTTTCTTTGTCGGATCACGGGGGTAGTACGTGCGTTGTC GACCATCGCTCCTCCCGGACGCTTGGTGGGTGGCATCGTCGATTACTGGC ATCCAGGGTCATGGTCTTGACGTCGAGCGCAGGCAGCGCCGTCCCAACAC AAACCACGTTGTTGTAGCAGCGCTGCTTTCTGTCTCTCTGTCTGTCCGTC CGTCTGTGCCGAGGGTATGCCAAAAATCACGGGGCAGCGTGTGCGTGAGC AACTCGTCCCGGCACGCCGGCGGTGATCCATCCACATTGCTTGGTTGCCG ATCGCCAGAGAGAACAAGCGGCGATACCTTCGATTTTAGTCGCGGCTTCA TCGATCGTCTGACCGGCCGGCCGACCGAAACCCGGCACCCATAAGTGTTC AGTACAAGAAACAGTATACCGCTGGTTTTTTTTTTCATTTCCATGAATAA TACGCCGTGTTAGGCCGTACCCCCCTTGAGATCCTCCCCGGACTGGAGTG GCGAAGGGGCACGCCACATATCGCAAGCGCCCTCCTGCTGATCTCCCAAA TGCCTCACTTTACCCCTCCCCCCCCGTCCTTTCTTGATTGTTGATGACGG GTCGCCGAAAACTGCTGCGCCGATCAAACTGATTTTATTTTTTCTCGTGT GACTATCATGCGCGCGCGCTCAGCTGGTGTACGAGTTTTTCCTGCGGTTC GTCGTTTCTACGGAGGTGAACGCCAAGGTTGCGAAAAAGTACATCGACCA CAAGTTCTGCTTCCAGCTCATAGAGCTCTTCGATAGGTGAGGCCGCAGCG GGGACCAACGGGCGCGCTAGGGTTCCCTCGTCGAGCGTAGGATCGTGCAC GCGAGGAGGTACGGCGGTCGTGCACGTTAGGGGGAGGGGGAGGCAGGGGA TCTTGTGCGCGAGACGAGGGCGCAGGAGCTGTGGCGGCCAGTTCCCTCGG CGCGGGTTTGTCGGTAGAAGACGGGGCGAGCGCCTCGCTCCGAGTCGGGG CGCTGGCCGTCATCTTCCTTTTGCCGGGCGCTGTGCTTCCGAAGGTTGCT TCCCTCGGTTGCGCCGGGTAGAGGTAAGGCACCGCACCCCACGCGTTGCC ACCGACTCTTCCACCCCTTCCGTCCCCGTAGGGGAGTGGGGATCGCCACC GGGGGCCTACCCCACTCAACCGTGTGCAACTGTGTCCGGCAGACGTGTCC CGTCAGGGTTGAGCTCTGGACGGCGATCCTCCCTCTCGACGTAACCCCCC CCCCCCTCCCTCGCTCCACCCCCGAAAAACATGCGTTTTCAACTTTTTCA GCGAGGACCCCCGCGAAAGAGACTACCTTAAGACCATCCTCCATCGAATC TACGGGAAATTCATGAACCACCGGTCACACATCCGCAAAACAATCGGGAA CGTTTTCTTCCGCTTCGTCTACGAAACGGAACGCCACAACGGCATCGGTG AGTTAGCCCTTAGCTGTACAGTAGGCCGGTCGCAGTTTCGCCGCTGTGTT TGTATCTTTATTTTGAACTTGGCCGCACGTTTTGGTCGAGTACGGACGTG CTCGGTGATATGGTTGCATATCTTCCTCTGTTTTATCGAGCATGAGCAGC GTCGAGGGCGCTGAGGATTGCCATGAAAAGTATTTTTTCATGATCTACGA CAGACTAATCTTATCCCTCGCCGCTATGGTAAGACAAATGCTTATCTTCG GTCAGCTGTTTTGATAACCGTATGTTGAGTGAGCTGCCATTGACGCACAC ACGCACGTGCGTTGGACAGGGGAGTTGCTGGAGATCTTGGGGTCGATCAT CAACGGGTTCGCCATTCCTTTGAAGAAGGAGCACCTGCTGTTCCTTCAAA AGGCGCTCATCCCTCTACACAAGCCTAAGTGTGTCTCCCTGTATCACCAG CAGCTGAGCTACTGCATCGTGCAGTATGTAGAAAAGGATCCGGAGACGGT TATGCCGGTACTCAGGGTAAGTGCATACGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGCGGCGGCGGCAACATGCTGGCTTGTTTTTTTCTTATCC GACCATGTTTGCTCTCGCACGCTGTGTTGTAACGCAAGTTCGCTTGCGAT GCACGTCGCCTGGTAACCCACGTGGTCTTGGAAAACACGAAAAAGTTTTG ATACCTTCCTGCCTCAAGCAACCTCGCAAAAAAGAGCCTTCGGCAGAGCA TGTCGCCGGCGGCCGGGACTATTATTGTTGGTGCTTGCTTTCCTGTTGGG AACCGATCGCCGACAGAATTATGGCAAACACAGTACCTGTGGTCAAGCCG TTCTCAGGGAAGAAAAGCCGGCGGTTTTGGTCTGATTGGGAAAGGAGACG CTCCACCGTATTCATCTGCAGGGGAGGGCGCCGTGAGGAAGTGATCATGT GTCACTCGCGATCTGTGAGGTGCTTTGTTTCCATGTCGTGCATGGGCGCT TCGAAGCGAACCCTCTGCCACAGCTCGATCTCTCCACGAATGCACGGAAA AAATATAGATTTGTGCGCGCATCGTTTCTGTGATCTACCGTTGATTCATC TCCCATGTTTTTTTTTTTGCTGCAACGTCAGGGCCTGATCCGGTTCTGGC CATGGAGCTGCAGCTCGAAACAGGTGCTCTTCCTAAACGAACTGGAGGAC GTGTTGGAGCTCCTCATGGATGAGCAGGTGTGGGCAAAGAAAATGCCCTT TGCTGTAAAAGCTGTATGACTGTTCCATCTCGTTAGGGGGGGAAGTGTGT TTGGCCTTGATGCGATGTCCATGGGTTCTACTCGGAGTGAGTCACGGGGC GGTGTTAACCCAAGCCGTCGACGGGGGCTAAGCCGGCCCTGGCTACACTT GCGTGACGGGCATGGGTTGATAGACATGGTTGCTGGTTCGAAGAACGAGG CAAAGATGGATCGACATGGCTTGCTGATTTCAAGAACGAAGCATAGATTG GCATGGTGATGGGTTTGGCGAGATAAGCTCTTGCCGTATGAGTCTTGGTC AGTTTCGATGTCTGCTGTATTTCCCGTCCGAGCTGTTCATCGTTTTTGCC GCCATGATACGCGAGTCATCTCGAAGTTCAAAGTCACACACCCTGTAGAA ACATCATGACATACTTCATGTGTCTCTTAGTGGGCATGTGCTCATTGCGT CGATTAAGTCGGGGTATGATGAGTCAGACGCACAGGCATGCTTCGGAGTA CGCTTTCGCCGACGGCGACGTCTAGATGGTGCCATGTGTAAGCACGCCTG CAACATGGTTGTCCCTGAGTCGATGCCTGAGGAGGTACTAGTAACATTTC ACCCTCTGACTGAATGCAATGAAGCCAAACTACGACCGCTGTGTCTGGTT TCCAGCGCGCTATTCACCGCACATCGGCGAACATCATTCACAACCCTCTC GTACGCGTCCGACCAATCCGTGCGCGGAAGCCAGAAAATTCGCCGTAGGC GCGCAGCTTCTTGCGCCTGTGCGTGTCGCGTGTGTCCGTGACCCTCCCGC CCTCATTTATGGAAGCTGTTTCTGCCTTGTCCCTGCCGTTTTCGCGCGTG CTTGGTTCCTTTTCTTCAGCTGCAGCAGGTGCACGACAAGCTTTTCCACC TCCTGGCCCAATGTCTCGCCAGCCAACACTTCCAGGTGCGAAGTGAAGGA GACGCCGGCGTCGAGGAAAGGGAGGGGAGATGGCTGTTTACTTCCTTTAG ATACCTTTAGTCTTTCGATACCAGTACTCGCAGCGGTGGTGTTGAGCTCG ATGGCGACATCATCCGAGGGCGAATTCGCGCCACACGTTTTACGCGACAG GGTTCCCGTCCCTTCCTTCCCCGTCCGGACCCGACCTGACCCGATCCGAT CCGACCATCGATAGACATACACAACTTTGTAGAGATCCATCTCCCCCTGC AGCTTGTATCTCGCCGAATGCGACGTGAGCAAGCGACACGGCGGAAACGC GATGATGCCCACGGAGGGCTTTTCAGAAAAGTTTCTAGGAGGAGCACGAG CGTTCATCTTTGTTGTCTCTCGTTTCGTCGGCCTGATGGGTTCGTTACGA CTCGACCGGTGTGTGTGGGTGCGTGTGTTCGTGTTCGTGTTCGCGTTTGT TGTTTCGTGCGATCTCCGAACAGGTGGCGGAACGCACGTTGTTTTTGTGG AATAACGAGCACTTGGTGAGCAAGGGGTGCTTCAGCAGGGGCTACACTCA CTCGATACTACCGGTCATCTACGGTGAGCCGTGGTCGGCGATCGAGGCCG TGGTCGGCGACGGTGCTCACTTTTTTTTTTTTGTCGTGGTCGTCCTTGTG TCGTCGCCGATGTCGCCGGTGTCATCACTGTTGCGTTTATTACGTAATTT CCGAACCTAACCGCGTGTGTAGAGTGCGCTCCCGGTAGTCCGACGAAGGA GGCTCTCTCCGGTAGACCATTTTTCCAAGCTGAGCTTGGCCACTCCGATT AGGCGACTTCGGCGGCACCGACGGTCCGAAGCGCTGTCAAGCTAGCATGT GAAGCGGAACAATCCAGACGCCACGGCGGCGCGTCTCGCGAAGGTCTCGG CATCCTCGCGGTCGTCCCTATCCGTCGCGCCCGACACTTCCACGGCACTC CGCGTGTCCCCCGTTTTTTAGAGAGAGGCAGCGACAGCATTTCTCCGCAC CCTGGGGGTAAAATGCTGTTCCAACCTCGCGCCACGTATTCGTACCCCGG GATTCCTTCGGAGTCGGCGGAAGAAATCGTCCTTCATGCTTTTGTCCCCA TCAATGAACCCTCACTGTTTTGAACTCAACAGAAGCCTCGGGGTACGCCT CACACGACGTACCTCAGGAGGTGTTCTAACGGTGTTGTTATGTTTTCTTT AAAAATCGTCCAACGGTGCAATCTTTTGCGGTGTCGTAGGTGTTATTGGT CTCGGGTGTAAAGGCTGCGTTGTCCTGGCGGGATGGATGGCGTGGATGGC GAGAACAGCGACAGCAAGAGCAAATATGACCTGTTCCGCGTGCGGTGTCC AACGCTCGCTCGTTGTCCTTGGTTGTCCGTTTTGTTTCCTTTTTGCGCTC GCGTCTCTCCTCGGCCGATGACGTCGAGCAGGCCCCCTGCACAAGCACTC GTTGGGTCACTGGAACAACACCGTGGAAGGCTTGGCGCAAAACGTGCTCA AGATGTACATGGAGTTCGACATACACCTCTACGACAGGTGTGGGCCCTGC CGCTGCGTTGCGCGTGCGCTTACGGCGCGCACATTTTGAGCGCGCGTTTG TTGGTGCGTTCGAGAGGACCTGACGCGTTGTGTCGCACGGCGCACCCCGA CCGTTGCACTCTTCGCGGATTGAAAAGATGTGTGTTGTTGGGTGAGTCTG CCGGGTCGTTCTCCTTCGTGGGTTCCTTGAAAGAGTGCTCGCACCGCTTC TGTGCCCGTTAGTGCTGGTCCTGGTGCTGTGTGTGAAGGCTTCGTCCTCC GTGCGGTCGCAGGCCAAGCTTGTCGCCCTTCCGTTGTCGCTGGCACCACG AGATGGAGTGAGGTGCATGGTCATTGGTGCCCTGTTGAGCTGCCGCTAGT CCGCTGAACTGCTCGTGTGGTGTCGCTCTCGTCGTCAGGGTGCTGTCGGA GCACCTCAAGCTCGAGGCGGAGACGGCGCAAAGGAAGGAGGACGCGTGCA AGAAGTGGGCGGTAAGACCGTTCAACGCCGACGCGGCCAGCTGTTGCTTT TGCTGTCGCTGTTGTTGGTGCTGGTGCTTTGGCCGTTGCTGTCGTTACGG TGCTGTTGTTGCTGGTGTTGGTGCTGATGCTGTGGCCGTTGCTGTCGTTG CGGTGCTGTCGCCGGTGTGGTGGCGGTCAGAGTTGCTGTCGGCGTTGCTG CCTGCATCTATTGAAAGTAAGAGTGAGGTGTACTTATAGCACGGAGTAAT GTTACCCTTTCTTCGTCTTGGTCGTCACCGTCGTGGTTGCTGAAAGTTGT CGTTGTCGTTGCGTGTGCATTTTCTCTTGCTGCTGCTGCTGCTGCTGCTG CTGCCGTGTACATGATCGTCGTTATGCCGGGCCCTACTACTTAGTGCTAT CGCAATTCCGTCATATTGACTCTCCAGGCACCACCGCACCACTCCTGGAG CGTTTCTACTCGTCTGGCTGTTTCGTTCGTCCATCAATTTGTCAGCCATG GACACCTCACGCCGTTGGCAACCGCCGCCACATCAGGGTGTCCCCTTCAC AGCTTACTATCCCAGCGTACATCACGCTGCGACCGTTTTATTTCCTCTAC GTGCTATGAAGCGTGCTATAAAGCGTGCTGTGTGGTGTCGTGTGCCATCT AGCGTCACCCTTCACCACCGGCTTTCCTCCCTGCCTTGCTTGCACCATGC TCGCGAATTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTACTGCTGCTGCTGCTGCTGTTGGACGTGCGGTGGGGTATCCCGCTCT TCCCTCGGTACCGTCAGGTATTGGAAGAGAAGGCGCTTTCCAAGTAAAAG GGGCTTCGCTCTCCCCCCACCTCCGTCGGGTTGCCCCGGGTTCCGTGGCG CCCCGACGAATCATTTTTTTTCCTGCCGGAGCGTGGTGGTAGGTCATGGC CTCGCGCGCTTTGGGTGGCCTGGTCGCCTGGTGGCTTGTTGAGAGCCATC GGGACGCTGCATCCGCACCGCTGCATCGGCACCGCTGCGCTTCTTCCGGA CGAAAAAAAAAAGTGAAAGAGGCAGGGCGTAACAGCGGCGGCGGCCTCTT GCGGGGAAGAGGAAGGGTGGAGCTAAATCCGTCCTGCCATCTGCGAGAAC GTCGGGAGGAAGGAGGGTAGGGAGGGAGAGAGGGAAAGAGGATGCCGGAG GAAACGAAGAGGAGGAGACGGAGGAGAGGGAAGGAAGGACCGGGGTAGGC CGGTTTCGTTACTTTGCACCACGAGCCACGGGGAACGCACGTTCTTGACG ACACGTTACGGGGGGGGCGTTTGTGTCGGAAGCCACCGTTTCCGGTGCGC GGGGGCTTGACTTGATCGCTGGCGTTAGTCCAGCAGTTGGCTGTCGACAG TTGACCGTTGGTTGGCTGTTGGTTGGCCGTTGGTTGGCCGTTGGTTGGCC GTTGGCTGTCAACAGCAGTCGGCCGTTCGATGATTGTCCCGGGTTCGGGG CTGATCCAGCCGACAGAGTGGTAGAGAGAAAGAGAGAGAGAGACCCTTGC GTGCGGCACGCCTGGGGGGGAATACAGGTGCGCGTTGGCGGAGTAGACAG CTTAGGATCTCGGTTGACTGATGCTTGACGCCTTCGCCGATTGACCGTTG TTTGATGCATCGCGACCGCGGCGAGGCTGGCTCGGCCATCGATGGGGCAC GCGGAGCGGGATACCGACGTACGCACGTCCGTCCGTCCGTCCGTCTGCTG GGTGGGGATGGGGTTGTATCGTTGTATTCGTTGTTGTATCAGAGCCGTCG TCGTCGTCGTCGTCGTTGTCGGAAAAGACGAGAGGAAGGGTGTAAACTGA AGTAGTGGGTATGTCTTTTAATACGCTCGCCGCTCGTTCGCTCGCTCTCT CTCACGCCCGCGGACACATTCCCGTATTTTCCCGTATTTTCCCGCTCGAG AGCGAAGCGCGAAGGAGCGGGCACGCACGCGATGCTTGGCTGGCTGCCTG TGTCGCGGGGCGTGAAATAGTCATCCTCGTGGCCTATTTCGTCGAGGCCC CGCGGCGTTGGAGGGGATAGGAGCGGGGTCGTCGGTTCTGTCGTCGGTTC GGTCGTCGGTTCGGTCGTCGGTTCGGGTTCTTTGAGGATGGCGGGCGGGA CGGAGGGGATCGACCCGTCCAGAACAAACCGTACCTCGCACCCACCTACC TGACGGGCGGGTGCTCGGCGGGGGTGACCGGCCCATGGCGGTGCTTTCCC CCTCGCCCCCGGCCACTCTGGACGTAGCTAGCCAGGCGAGGTAGGCGAGG TAGGCGGACGCGGCACAAAGGAAGCATTGTACAAAAGTATTGCTCCCGTT GGATAGAGCTCACACTCCCCCTGTTCGCTCCTCCCGGATCGAGACACGCC CAGCCCCTAGCCGCCCGCCGGGATTTCCACCCTGGGGAGGGAGCGACAAG ATGGGATCGTGCGGCGTGCGGCCAGTCGAATGGGTTATCGTATCGGTCTA TCCGATCTAGAGAACATGCCGCGGGAAAAAGCCCGCTGGGCATCCGCGGT TAGGCTCAGATGGTCCCATCTGTCGCGGTTCCGATCGCCTTCCGAGGAAT TCTTTTTTCGGCTGCTGAGGTTTCTCGCGGGAGATTTTTTTTATTTCGGG GTGGGGGGGACGGCCGC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1217:18622..27138-

>mRNA_H-canaliculatus_F_contig1217.1872.1 ID=mRNA_H-canaliculatus_F_contig1217.1872.1|Name=mRNA_H-canaliculatus_F_contig1217.1872.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2130bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1217:18622..27138- (Hapterophycus canaliculatus Oshoro5f female)
ATGCTGACGGAGTCGTTGTATCCGTGCATCATGCAGATGGTGTCGGCGAA
CGTGTGTCGAGCGTTGCCCCCAGCGACCGACGATTTCGACCCAGAGGAGG
ACGAGCCGGTGTTGGAGTTGTCGTGGCCGCACCTGCAGATGCTGACGGAG
TCGTTGTATCCGTGCATCATGCAGATGGTGTCGGCGAACGTGTGTCGAGC
GTTGCCCCCAGCGACCGACGATTTCGACCCAGAGGAGGACGAGCCGGTGT
TGGAGTTGTCGTGGCCGCACCTGCAGCTGGTGTACGAGTTTTTCCTGCGG
TTCGTCGTTTCTACGGAGGTGAACGCCAAGGTTGCGAAAAAGTACATCGA
CCACAAGTTCTGCTTCCAGCTCATAGAGCTCTTCGATAGCTGGTGTACGA
GTTTTTCCTGCGGTTCGTCGTTTCTACGGAGGTGAACGCCAAGGTTGCGA
AAAAGTACATCGACCACAAGTTCTGCTTCCAGCTCATAGAGCTCTTCGAT
AGCGAGGACCCCCGCGAAAGAGACTACCTTAAGACCATCCTCCATCGAAT
CTACGGGAAATTCATGAACCACCGGTCACACATCCGCAAAACAATCGGGA
ACGTTTTCTTCCGCTTCGTCTACGAAACGGAACGCCACAACGGCATCGCG
AGGACCCCCGCGAAAGAGACTACCTTAAGACCATCCTCCATCGAATCTAC
GGGAAATTCATGAACCACCGGTCACACATCCGCAAAACAATCGGGAACGT
TTTCTTCCGCTTCGTCTACGAAACGGAACGCCACAACGGCATCGGGGAGT
TGCTGGAGATCTTGGGGTCGATCATCAACGGGTTCGCCATTCCTTTGAAG
AAGGAGCACCTGCTGTTCCTTCAAAAGGCGCTCATCCCTCTACACAAGCC
TAAGTGTGTCTCCCTGTATCACCAGCAGCTGAGCTACTGCATCGTGCAGT
ATGTAGAAAAGGATCCGGAGACGGTTATGCCGGTACTCAGGGGGAGTTGC
TGGAGATCTTGGGGTCGATCATCAACGGGTTCGCCATTCCTTTGAAGAAG
GAGCACCTGCTGTTCCTTCAAAAGGCGCTCATCCCTCTACACAAGCCTAA
GTGTGTCTCCCTGTATCACCAGCAGCTGAGCTACTGCATCGTGCAGTATG
TAGAAAAGGATCCGGAGACGGTTATGCCGGTACTCAGGGGCCTGATCCGG
TTCTGGCCATGGAGCTGCAGCTCGAAACAGGTGCTCTTCCTAAACGAACT
GGAGGACGTGTTGGAGCTCCTCATGGATGAGCAGGGCCTGATCCGGTTCT
GGCCATGGAGCTGCAGCTCGAAACAGGTGCTCTTCCTAAACGAACTGGAG
GACGTGTTGGAGCTCCTCATGGATGAGCAGCTGCAGCAGGTGCACGACAA
GCTTTTCCACCTCCTGGCCCAATGTCTCGCCAGCCAACACTTCCAGCTGC
AGCAGGTGCACGACAAGCTTTTCCACCTCCTGGCCCAATGTCTCGCCAGC
CAACACTTCCAGGTGGCGGAACGCACGTTGTTTTTGTGGAATAACGAGCA
CTTGGTGAGCAAGGGGTGCTTCAGCAGGGGCTACACTCACTCGATACTAC
CGGTCATCTACGGTGGCGGAACGCACGTTGTTTTTGTGGAATAACGAGCA
CTTGGTGAGCAAGGGGTGCTTCAGCAGGGGCTACACTCACTCGATACTAC
CGGTCATCTACGGCCCCCTGCACAAGCACTCGTTGGGTCACTGGAACAAC
ACCGTGGAAGGCTTGGCGCAAAACGTGCTCAAGATGTACATGGAGTTCGA
CATACACCTCTACGACAGGCCCCCTGCACAAGCACTCGTTGGGTCACTGG
AACAACACCGTGGAAGGCTTGGCGCAAAACGTGCTCAAGATGTACATGGA
GTTCGACATACACCTCTACGACAGGGTGCTGTCGGAGCACCTCAAGCTCG
AGGCGGAGACGGCGCAAAGGAAGGAGGACGCGTGCAAGAAGTGGGCGGGT
GCTGTCGGAGCACCTCAAGCTCGAGGCGGAGACGGCGCAAAGGAAGGAGG
ACGCGTGCAAGAAGTGGGCGGTATTGGAAGAGAAGGCGCTTTCCAAGTAA
GTATTGGAAGAGAAGGCGCTTTCCAAGTAA
back to top