prot_H-canaliculatus_F_contig12162.1867.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12162.1867.1
Unique Nameprot_H-canaliculatus_F_contig12162.1867.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length260
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12162.1867.1 vs. uniprot
Match: A0A6H5L3B9_9PHAE (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.060e-86
Identity = 183/250 (73.20%), Postives = 207/250 (82.80%), Query Frame = 0 
Query:    1 MRAQSKRAESELEEARRKTTRLEAEKAVLEERVEVEGAERVTVVASVSHERDFLCWHITLFFQQVDRLEQELSELRHLHEAQATAAAARAQTTGVLEEYRTRAQQALKRANEMTSQTASENKRLQAKMSNLFAEVAQQRPLWEQAKQREQIYRAEVAELKAQTASKATELEVVARAMVALEARLAEEEEGKRNAHISVMRLEAQGKSLKQELQRQHKALSVAQDHEANLQTRLADQEAVLRAMESDQRGK 250
            +RAQS R ESELEEAR   TR+EAEKAVLEERVEVEGAERVTVVASVS ERDFL          VDRLEQE+ ELR   EAQATAAAARAQTTGVLEEYRTRAQQALKRANE+TSQTASENKRL+A+M  L  EVAQQRPLWEQ+KQ E+++RAEVAELK + A++ATEL  +A A  ALEA++ E+EE +R+AH SVMRLEAQGKSLKQELQRQ KAL+ AQ++E  LQTRLADQEA L+A E+ QR K
Sbjct:  552 VRAQSIRIESELEEAREHATRIEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAIA----VDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQGKSLKQELQRQQKALAAAQENEVTLQTRLADQEAALQAAENRQRRK 797
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12162.1867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3B9_9PHAE1.060e-8673.20GRIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableCOILSCoilCoilcoord: 96..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12162contigH-canaliculatus_F_contig12162:592..2360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12162.1867.1mRNA_H-canaliculatus_F_contig12162.1867.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12162 204..3813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12162.1867.1 ID=prot_H-canaliculatus_F_contig12162.1867.1|Name=mRNA_H-canaliculatus_F_contig12162.1867.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=260bp
MRAQSKRAESELEEARRKTTRLEAEKAVLEERVEVEGAERVTVVASVSHE
RDFLCWHITLFFQQVDRLEQELSELRHLHEAQATAAAARAQTTGVLEEYR
TRAQQALKRANEMTSQTASENKRLQAKMSNLFAEVAQQRPLWEQAKQREQ
IYRAEVAELKAQTASKATELEVVARAMVALEARLAEEEEGKRNAHISVMR
LEAQGKSLKQELQRQHKALSVAQDHEANLQTRLADQEAVLRAMESDQRGK
SVSSLVWLS*
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