prot_H-canaliculatus_F_contig12152.1859.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12152.1859.1
Unique Nameprot_H-canaliculatus_F_contig12152.1859.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length154
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12152.1859.1 vs. uniprot
Match: D7FLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL9_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.200e-24
Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 0 
Query:   24 DREALEAAWRWWVGGWLRRRGQRIRTIELESKRRQERDRDLAEELAQAQREAASLXXXXXXXEAELQRTQILVREQEEALARSRRSLTEAAAXXXXXXXXXGPA 127
            +REAL AAWRWWVGGWLRR+ + IRT E+E++RR +R+RDLAE+L Q Q+E+A+L       E+ELQRT+ILV EQEEAL  SRRSL EA+A         GPA
Sbjct:  805 EREALGAAWRWWVGGWLRRQAEGIRTREVEARRRAKRERDLAEQLEQVQQESAALQKEALAVESELQRTKILVLEQEEALEASRRSLAEASAAATAVKSRLGPA 908
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BLAST of mRNA_H-canaliculatus_F_contig12152.1859.1 vs. uniprot
Match: A0A6H5J7Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z0_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.030e-23
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0 
Query:   24 DREALEAAWRWWVGGWLRRRGQRIRTIELESKRRQERDRDLAEELAQAQREAASLXXXXXXXEAELQRTQILVREQEEALARSRRSLTEAAAXXXXXXXXXGPA 127
            +REAL AAWRWWVGGWLRR+ + IRT E+E++RR +RDRDLAE+L Q  +++A+L       E ELQRT+I+V EQEEAL  SRRSL EA+A         GPA
Sbjct:  787 EREALGAAWRWWVGGWLRRQAEGIRTREVEARRRAKRDRDLAEQLEQVHQDSAALQKEAVAVETELQRTKIMVLEQEEALEASRRSLAEASAAAAAVKSRLGPA 890
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12152.1859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLL9_ECTSI1.200e-2459.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7Z0_9PHAE1.030e-2357.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12152contigH-canaliculatus_F_contig12152:380..3029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12152.1859.1mRNA_H-canaliculatus_F_contig12152.1859.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12152 378..3029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12152.1859.1 ID=prot_H-canaliculatus_F_contig12152.1859.1|Name=mRNA_H-canaliculatus_F_contig12152.1859.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=154bp
GAPSAATAIAAAEAAAPAARRRRDREALEAAWRWWVGGWLRRRGQRIRTI
ELESKRRQERDRDLAEELAQAQREAASLQKEAAAVEAELQRTQILVREQE
EALARSRRSLTEAAAAASAVKARLGPAAPSNPSKGRKGAKAAKNGGRVRK
QGRA
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