mRNA_H-canaliculatus_F_contig1211.1832.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1211.1832.1
Unique NamemRNA_H-canaliculatus_F_contig1211.1832.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: D7G6P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P7_ECTSI)

HSP 1 Score: 697 bits (1798), Expect = 2.760e-237
Identity = 380/505 (75.25%), Postives = 422/505 (83.56%), Query Frame = 3
Query:  123 QWSSITVAARRCHRSTTSATAAVATKIASRHSSTLVDIPRTRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSP-----------DDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            +W SI  AARRC   T +     ++   +  SS+ V  PRTR ELV +LPP+YPSDL E+IR+D  AVGR+LVVLDDDPTGTQ+VHSVPVLAEW VD+L KEL+SPG YRV+YLNTNARALPP EAS LF  IA NLREA RITGV+VSMVSRGDSTLRGHFPSDLV+LE GM V+HDAWIV PFFKAGGRITAGD+HFVEQQG+             D+  AL+PAG+TEFA+DKAFGYRSSNL+DWI EKA+  EA  EG   Q   PPAATER+VSVSL DLR+GGP  VRERL EA+GGCVVVNA+E+RDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLL A DF  LR KAG  GS+GGLTVVGSYV+KTTEQL+H+L A+DA GVELRA EVVGGG+EG AASRQEVERVRAEVSL LSRG +VILYTSRGVP+QGDGAGGL+FGERVG ALVACVSGLTERPRFLLSKGGITSSDVATQ L MKRA+V+
Sbjct:    5 EWKSI-AAARRCLLPTATTAWRRSSYSTAPPSSSSVIFPRTRSELVGSLPPVYPSDLAEAIRKDVAAVGRMLVVLDDDPTGTQSVHSVPVLAEWSVDILVKELRSPGQYRVMYLNTNARALPPTEASELFEEIAKNLREASRITGVEVSMVSRGDSTLRGHFPSDLVSLETGMRVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGLGTDSTDDAVALVPAGETEFARDKAFGYRSSNLIDWIREKASVAEA-DEGRWRQ---PPAATERVVSVSLRDLREGGPEVVRERLGEAKGGCVVVNAVEKRDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLAADDFDALRVKAGEAGSEGGLTVVGSYVAKTTEQLQHSLEAMDAEGVELRAAEVVGGGQEGIAASRQEVERVRAEVSLLLSRGTNVILYTSRGVPLQGDGAGGLVFGERVGAALVACVSGLTERPRFLLSKGGITSSDVATQALAMKRAEVM 504          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A2N2KFE7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15 TaxID=2013742 RepID=A0A2N2KFE7_9DELT)

HSP 1 Score: 355 bits (911), Expect = 2.030e-110
Identity = 208/457 (45.51%), Postives = 288/457 (63.02%), Query Frame = 3
Query:  237 PRTRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGC-VVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            P+++K+L+ +LPP +P DL   I+++  + GR +VVLDDDPTGTQTVHS+PVL  W  + L  EL++  P  V Y+ TN+R+LP  EA RL R I +NL +A + TG D  +VSR DSTLRGHFP ++ AL D +G   D WI+ PFF  GGR T  D+H+VE+ GS       L PAG TEFA+D  FGYRSSNL +W+ EK         GGR        +++ +VS+++ DLR+GGP  V ++L         VVNA   RD++VFV G+L  E +GKRFL+R+AA  V VRG ++ RPLL        R + G   S GGL +VGS+V +TT QL+  L   + TG+E++   ++   EE + +   E+ RV   V   L  G+DV++YTSR +    D  G LL G R+   L+  +  L+E+PR+LL+KGGIT+SDVAT+GL +KRA V+
Sbjct:    5 PQSKKDLLQSLPPEWPVDLRPEIQQEIRSSGRKVVVLDDDPTGTQTVHSIPVLTGWNREALETELQNESP--VFYILTNSRSLPLDEAQRLNREIGSNLSDAAKGTGRDYVVVSRSDSTLRGHFPGEVEALADSLGRDFDGWIINPFFLEGGRYTIDDVHYVEEGGS-------LTPAGQTEFARDSVFGYRSSNLREWVEEKT--------GGR-------ISSKGVVSITMEDLRKGGPDRVADKLKTLNRNAQCVVNAASYRDMEVFVLGLLAAEAQGKRFLYRTAASFVQVRGGIEPRPLLS-------REEIGPSPSGGGLVLVGSHVPRTTSQLQAVLAVHNVTGLEVKVESILL--EESKIS---ELGRVARLVDNALHAGKDVVVYTSRKLYTAEDSKGNLLIGRRISDGLITLLRMLSEKPRYLLAKGGITASDVATKGLNVKRAMVL 425          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A3M1JE11_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1JE11_9CHLR)

HSP 1 Score: 349 bits (896), Expect = 3.220e-108
Identity = 211/454 (46.48%), Postives = 270/454 (59.47%), Query Frame = 3
Query:  246 RKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQ-GGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            + EL+++LPP +P+ L   I+R   A GR LVVLDDDPTGTQTVH +PVL  WPV+ LA EL    P    YL TN+R+LP  +A  L   I  NL EA R TG + ++VSR DSTLRGHFP ++ AL   +  R D WI+ PFF  GGR T  DIH+V +          L PAG+TEFA+D AFGYR+SNL  W+ EK         GG+            +VS+++ D+R+GGPA V ++L   +    VVVNA   RDL+VFV G+L  E EG+RFL+R+AA  V VR  +  RPLL     Q L   A    S GGL VVGSYV +T  Q+       D   VEL    ++  G +      +E+ER   +V   L  G++V+LYTSR +    D A  L  G RV  +LVA V G+  RPRFLL+KGGITSSDVATQGL +K+A V+
Sbjct:   10 KNELINSLPPEWPTGLLPQIQRQVRAGGRKLVVLDDDPTGTQTVHGIPVLTHWPVEALAAELAGDSP--AFYLLTNSRSLPLPKAQALNAEIGRNLTEAARQTGTEFAVVSRSDSTLRGHFPGEVEALAHSLPTRFDGWIINPFFLEGGRYTINDIHYVAEGD-------VLTPAGETEFAKDAAFGYRASNLRRWVEEKT--------GGKISAGA-------VVSITIDDVRRGGPARVAKKLLGVEKDSVVVVNAAGYRDLEVFVLGLLAAEAEGRRFLYRTAASFVRVRAGISPRPLLTT---QELAPAA----SGGGLVVVGSYVPRTGTQINALFEQTDIQRVELNVKALLDSGRQA-----EEIERAAEQVESNLQAGQNVVLYTSRQLITGTDAAASLAIGRRVSASLVAVVRGIATRPRFLLAKGGITSSDVATQGLNIKKALVM 427          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A3M1H1M7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1H1M7_9CHLR)

HSP 1 Score: 347 bits (891), Expect = 1.460e-107
Identity = 209/456 (45.83%), Postives = 272/456 (59.65%), Query Frame = 3
Query:  237 PRTRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            P  R++L   LPP +P+DL  +I++   A  R +VVLDDDPTGTQTVH +PVL EW VD L +EL   GP+   YL TN+RALP  +A  L   I  NLR A   +G +  +VSR DSTLRGHFP ++ +L   +    D WI+ P F  GGR+T  DIH+  +          L+PAG TEFA+D  FGYRSS+L  W+ EK         GG         + ER+VS+SL DLR+GGP  V  +LA   GG  VVNA+  RDL+VFV G+L  E EGKRFL+R+AA  V VR  +  RPLL   +         +P + GGL VVGSYV ++T QL   L      G+E+    ++    + RA   +EV R+ A V  +L+ G DV++YT+R V    D +  L  GERV   L A V  +  RPR+LL+KGGITSSD+ATQGLG+KRA V+
Sbjct:    4 PVLREDLFKQLPPEWPADLLPAIQKQVAASRRKVVVLDDDPTGTQTVHHLPVLTEWSVDRLVEELT--GPFPAFYLLTNSRALPLAQAQALNAEIGHNLRSASARSGQNFVVVSRSDSTLRGHFPGEVESLARALAEPFDGWIILPCFPEGGRLTVNDIHYAAEGDR-------LVPAGQTEFARDPVFGYRSSDLRRWVVEKM--------GG---------SVERVVSISLDDLRRGGPEQVAGKLARLNGGVCVVNAVSYRDLEVFVYGLLMAEAEGKRFLYRTAASFVRVRAGLAPRPLLTPTELN-------LPSAGGGLVVVGSYVPRSTGQLHRLLSRPHLAGLEIDTPALL----DQRAG--EEVRRIAAAVEKRLAAGEDVVVYTARTVISGPDASASLAIGERVSAGLAAVVRSICVRPRYLLAKGGITSSDIATQGLGVKRAMVL 420          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A7C3F848_9CHLR (Uncharacterized protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3F848_9CHLR)

HSP 1 Score: 340 bits (873), Expect = 8.140e-105
Identity = 213/454 (46.92%), Postives = 268/454 (59.03%), Query Frame = 3
Query:  246 RKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCV-VVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            R +L+  LP  +P DL   I+R  +A GR +VVLDDDPTGTQTVH VPVL EW V  L  EL S       YL TN+R+LP  EA  L   I  NL +A R  G    +VSR DSTLRGHFP ++ AL + +G   DAW++ PF   GGR T  D+H+V +       D  L+PAG+TEFA+D AFGYR+SNL +W+ EK       TEG      R PA  E + SVS+ DLR+GGP  V E L   + G V +VNA   RDL+VFV G+L  E +GKRFL+R+AA  V VR  +  RPLL   D         +PGS G L VVGS+V +TT QL   L      GVE+  T ++   +  R     E+ERV       L  GRD +++TSR +    D    LL G R+   LVA V  +T RPR+LL+KGGITSSDVAT GLG+KR+ V+
Sbjct:    7 RDDLLAGLPDEWPDDLLPEIQRQVQASGRKVVVLDDDPTGTQTVHGVPVLTEWSVTALRHELSSE--LSAFYLLTNSRSLPLEEACALNMEIGRNLVKAGREVGRSFVVVSRSDSTLRGHFPGEVEALAEALGDGFDAWLIIPFLLEGGRYTIRDVHYVAE-------DEWLVPAGETEFARDAAFGYRASNLREWVEEK-------TEG------RIPA--EAVASVSIEDLRRGGPERVTEILMGLERGSVCIVNAASSRDLEVFVLGLLTAEAQGKRFLYRTAASFVRVRAGISPRPLLTWKDLD-------LPGSGGALIVVGSHVPRTTSQLNALLALPGVIGVEVDVTSLLDDDQRVR-----EIERVARLADQYLRDGRDAVVFTSRQLITGEDAKSSLLIGRRISDGLVAIVRAMTARPRYLLAKGGITSSDVATLGLGVKRSLVL 424          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A7C4MXH1_9DELT (Uncharacterized protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C4MXH1_9DELT)

HSP 1 Score: 337 bits (864), Expect = 1.230e-103
Identity = 204/449 (45.43%), Postives = 270/449 (60.13%), Query Frame = 3
Query:  267 LPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCV-VVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQ--EVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            LP  +P DL   IR   +   R +VVLDDDPTGTQT+H++PVL +W V+ LA EL++   +   ++ TN+R+L    A  L R I  NL EA R      ++VSR DSTLRGHFP ++ AL  G+G   D WIV PFF  GGR T GD H+VE+ G        L+PA +TEFA+D  FGYRSSNL DW+ EKA        GGR        +++ ++S+S+ D+R GGP A+ ERL   +G  V VVNA   RD++VFVKG+L+ E +G+RFL+RSAA  V VR  +  RPLL   D         MP   GGLT+VGSYV KTT QL+  L    A G+E+    V+ G       SR+  E+ERV  +    L +GRDV++YTSR +   G     L  G RV  ALV  +  +    RF+++KGGIT+SDVAT+GL ++RA V+
Sbjct:    5 LPSEWPEDLLPLIRAQVKESRRKIVVLDDDPTGTQTIHNLPVLTDWSVEALASELQND--FSAFFILTNSRSLTLPLARSLNREIGGNLVEAGRRADRSFAVVSRSDSTLRGHFPGEVDALASGLGENFDGWIVIPFFLEGGRYTLGDTHYVEEGGW-------LVPAAETEFARDNVFGYRSSNLRDWVEEKA--------GGR-------VSSKDVLSISIEDVRMGGPDAITERLMTLKGSSVCVVNAAGYRDVEVFVKGLLDAEAQGRRFLYRSAASFVRVRAGISPRPLLSPTDLD-------MPTQGGGLTLVGSYVPKTTRQLQKLLALTQAAGIEMEVEAVLDG-------SRRDGEIERVCRKAESLLQKGRDVVIYTSRRLVTAGQAERDLSIGNRVSGALVTTLHRINATLRFVIAKGGITASDVATKGLHVRRALVL 415          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A3A5A2Q2_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5A2Q2_9DELT)

HSP 1 Score: 337 bits (863), Expect = 2.490e-103
Identity = 202/455 (44.40%), Postives = 272/455 (59.78%), Query Frame = 3
Query:  243 TRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERL-AEAQGGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            ++ +L   LPP +P DL   I +   A GR +VVLDDDPTGTQTVHS+PVL EW  + L  EL++  P  V Y+ TN+R+LP  +A  L   I  NL +A +  G D  +VSR DSTLRGHFP ++ +L + +G  +D WI+ PFF  GGR T GDIH+VE+QG        L+PAG TEFA+D+ FGYRSSNL +W+ EK A        GR +       +  + S++L DLR+GGP  V + L A  +    +VNA   RD++VFV G+L  E EGKRFL+R+AA  V VR  +  RPLL        R +     S GGL +VGSYV +TT QLE  L   D   +E++   ++  G         E+ R+   V   L+ GRD ++YTSR +    D  G LL G RV   L+A +  +  +PR+LL+KGGIT+SDVAT+GL +KRA V+
Sbjct:    8 SKDDLFGTLPPEWPVDLRPEIHKMIRASGRKVVVLDDDPTGTQTVHSIPVLTEWNRESLEAELRNDSP--VFYILTNSRSLPISDARELNAEIGRNLSDAGKAAGRDYVVVSRSDSTLRGHFPGEVESLAEAVGREYDGWIINPFFLEGGRYTIGDIHYVEEQGR-------LVPAGQTEFARDRVFGYRSSNLREWVEEKTA--------GRIR-------SHEVASITLKDLRKGGPDRVTQILKALGRNAPCIVNAASYRDMEVFVHGLLNAEAEGKRFLYRTAASFVQVRAGIAPRPLLS-------REQISPCTSGGGLVLVGSYVPRTTSQLEAVLKIPDVVDLEVKVEAILDQGSRD-----SELGRIAHLVDGALNSGRDAVVYTSRKLYTTEDPQGNLLLGSRVSDGLIALLHKVNAKPRYLLAKGGITASDVATKGLNVKRAVVL 426          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A3M1HQ99_9CHLR (Uncharacterized protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HQ99_9CHLR)

HSP 1 Score: 333 bits (854), Expect = 4.920e-102
Identity = 207/454 (45.59%), Postives = 265/454 (58.37%), Query Frame = 3
Query:  246 RKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCV-VVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            R+ L+  LPP +P  L   I++     GR +VVLDDDPTGTQTVH VPVL EW    LA EL++  P    Y+ TN+R+LP  EA  + R IA NLR A R  G +  +VSR DSTLRGH+P +  AL +G+G R DA ++ PFF  GGR T GD+H+V +          LIPA +T FA D  FGYRSSNL +W+ EK+     A+E               + S++L DLR+GGP+ VRERL   + G V VVNA    DL+V V G+L  E EG+RFL+R+AA  V VR  +  R LL        R +    GS GGL VVGSYV KTT QL   L   + TG+EL    ++      R   RQ +E V   V+  L  G DV++YTSR +   GD    L  G +V  +L+  V  L   PRFL++KGGITSSDVAT GLG++RA V+
Sbjct:    6 RQALLSELPPPWPYPLLPEIQQAVRDGGRKVVVLDDDPTGTQTVHGVPVLTEWSAPALAAELRNDLP--CFYILTNSRSLPLPEAQAMNREIAVNLRAAGRQVGREFVVVSRSDSTLRGHYPGETDALAEGLGCRFDATLIVPFFLEGGRYTIGDVHYVAEGDR-------LIPAAETPFAADAVFGYRSSNLREWVEEKSQGRVRASE---------------VASITLEDLRRGGPSKVRERLLALRDGQVCVVNAAAYEDLEVLVAGLLAAEAEGRRFLYRTAASFVRVRAGIAPRRLLS-------REELVCAGSQGGLVVVGSYVPKTTAQLSSLLDHTEITGIELHVQTLL-----DRRRRRQHLEDVIGRVNRLLRLGSDVVVYTSRALVKAGDAQENLAIGRQVSESLIDIVRRLEVMPRFLIAKGGITSSDVATAGLGIRRAMVL 423          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A540VC83_9CHLR (Uncharacterized protein n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VC83_9CHLR)

HSP 1 Score: 332 bits (851), Expect = 1.320e-101
Identity = 210/459 (45.75%), Postives = 270/459 (58.82%), Query Frame = 3
Query:  237 PRTRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQGGCV-VVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATGVELRATEVVGGGEEGRAASRQEVERVRA--EVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQVI 1604
            P  R+EL   LP  +P  L   IRR   A GR LVVLDDDPTGTQTV+ VPVL  W V+ LA EL +  P  V Y+ TN+R+LP  +A  L + I  NLR+A      D ++VSR DSTLRGHFP ++ AL   +    DA ++ PFF  GGR T  D+H+V +          LIPA +T FA+D AFGYRSSNL  W+ EK         GGR        A +++ S+S+ DLR GGP  V+ERL    GG + VVNA   RDL+V V G+L+ E +GKRFL+R+AA  V VR  +  RPLL A D         +P   GGL VVGSYV KTT Q+E  L      G+E+    ++          RQ+VE  RA   V+  L +G DV+L+TSR +    D    L  G RV  +LV  V+GL+ RPR+L++KGGITSSD+ATQ LG++RA V+
Sbjct:    5 PIQRQELFQQLPAEWPEPLLPEIRRQVAAGGRKLVVLDDDPTGTQTVYDVPVLTSWEVEALAAELAADSP--VFYILTNSRSLPLAQAQALNQEIGRNLRQAGAEAQRDFAVVSRSDSTLRGHFPGEVEALAAALETDFDATLLIPFFLEGGRYTIHDVHYVAEG-------EHLIPAAETPFARDAAFGYRSSNLRAWVAEKT--------GGR-------VAADQVASISIEDLRIGGPGLVQERLMALAGGRICVVNAASLRDLEVLVAGLLQAEAQGKRFLYRTAASFVQVRAGLAPRPLLTASDLA-------LPEEGGGLFVVGSYVPKTTGQVEVLLRQSGIQGIEVDVAALLDD-------QRQKVEIARAVDRVNQALDQGADVVLFTSRALVTGPDAEASLAIGRRVSESLVRMVAGLSVRPRYLVAKGGITSSDIATQALGIRRAWVL 425          
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Match: A0A350F0N9_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A350F0N9_9BACT)

HSP 1 Score: 326 bits (836), Expect = 2.300e-99
Identity = 204/450 (45.33%), Postives = 276/450 (61.33%), Query Frame = 3
Query:  264 ALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQTVHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIATNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAPFFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNLVDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRERLAEAQ-GGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRGAVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAIDATG---VELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSRGVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQGLGMKRAQV 1601
            +LPP++ +DL  SIR    A GR +VVLDDDPTGTQTV+ +PVL EW    L  EL+   P  + ++ TN+R+LP   A++L R I  NL+ A   T  +V+++SR DSTLRGHFP ++ AL + +G      I+APFF+ GGR+T  D H+V   G        L+PA +T FA+D +FG+  SNL +W+ EK         GGR        A E + S++L DLR+GGP  V  +L+    GG  V+NA+  RD++VFV G+LE E  GK+F+ R+AA  V  R A+++RPLL+ G+   LR   G    +GGL VVGS+V KTT QL+  L A +A G   VEL   E++GG  + RA   + V RV    ++QLSRG DV L+TSR V    D    L  G ++ TALV  V  L +RP F+++KGGITSSDVAT GL +KRA V
Sbjct:   10 SLPPVWSADLLPSIREANAAAGRSIVVLDDDPTGTQTVYDIPVLTEWTAGALTAELERDTP--LFHVLTNSRSLPGPRAAQLAREIGGNLKRALAATQREVTVISRSDSTLRGHFPGEVDALVEELGQPQAVRIIAPFFEEGGRLTIDDTHYVADGGR-------LVPAAETPFARDASFGFTRSNLREWVAEKT--------GGR-------IAPESVRSITLNDLRKGGPGIVAGKLSVVPAGGVCVINAVAMRDMEVFVAGLLEAEKAGKQFIARTAASYVRARAALEKRPLLDGGE---LRCATG----NGGLIVVGSHVPKTTAQLKQLLAA-NAPGPQPVELAVEELIGG--KRRAVIDEAVRRV----NVQLSRGHDVALHTSREVVTGADAGASLEIGAQISTALVEIVQRLAQRPAFMIAKGGITSSDVATHGLAVKRAMV 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1211.1832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P7_ECTSI2.760e-23775.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2N2KFE7_9DELT2.030e-11045.51Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A3M1JE11_9CHLR3.220e-10846.48Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A3M1H1M7_9CHLR1.460e-10745.83Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A7C3F848_9CHLR8.140e-10546.92Uncharacterized protein n=1 Tax=Caldilineae bacter... [more]
A0A7C4MXH1_9DELT1.230e-10345.43Uncharacterized protein n=1 Tax=Desulfobacterales ... [more]
A0A3A5A2Q2_9DELT2.490e-10344.40Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]
A0A3M1HQ99_9CHLR4.920e-10245.59Uncharacterized protein n=1 Tax=Caldilineae bacter... [more]
A0A540VC83_9CHLR1.320e-10145.75Uncharacterized protein n=1 Tax=Litorilinea aeroph... [more]
A0A350F0N9_9BACT2.300e-9945.33Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1211contigH-canaliculatus_F_contig1211:19859..28662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score707.6
Seed ortholog evalue4.4e-201
Seed eggNOG ortholog2880.D7G6P7
KEGG rclassRC00438,RC00439,RC00553,RC00603,RC00604
KEGG koko:K01469,ko:K01624
KEGG ReactionR00251,R01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00480,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00480,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00003,M00165,M00167,M00344,M00345
EggNOG free text desc.fructose-bisphosphate aldolase activity
EggNOG OGsCOG0191@1,COG2084@1,KOG0409@2759,KOG4153@2759
EC3.5.2.9,4.1.2.13
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionKetose-bisphosphate aldolase, class-II
Ec32 orthologEc-26_000120.2
Exons8
Model size2507
Cds size1599
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1211.1832.1prot_H-canaliculatus_F_contig1211.1832.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1211 19933..27828 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928925.0368967-UTR-H-canaliculatus_F_contig1211:19858..199321622928925.0368967-UTR-H-canaliculatus_F_contig1211:19858..19932Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1211 19859..19932 +
1696845614.6238701-UTR-H-canaliculatus_F_contig1211:19858..199321696845614.6238701-UTR-H-canaliculatus_F_contig1211:19858..19932Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1211 19859..19932 +
1622928925.1879225-UTR-H-canaliculatus_F_contig1211:27828..286621622928925.1879225-UTR-H-canaliculatus_F_contig1211:27828..28662Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1211 27829..28662 +
1696845614.72215-UTR-H-canaliculatus_F_contig1211:27828..286621696845614.72215-UTR-H-canaliculatus_F_contig1211:27828..28662Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1211 27829..28662 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928925.0541732-CDS-H-canaliculatus_F_contig1211:19932..199831622928925.0541732-CDS-H-canaliculatus_F_contig1211:19932..19983Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 19933..19983 +
1696845614.6352885-CDS-H-canaliculatus_F_contig1211:19932..199831696845614.6352885-CDS-H-canaliculatus_F_contig1211:19932..19983Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 19933..19983 +
1622928925.0687604-CDS-H-canaliculatus_F_contig1211:21008..213111622928925.0687604-CDS-H-canaliculatus_F_contig1211:21008..21311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 21009..21311 +
1696845614.6518633-CDS-H-canaliculatus_F_contig1211:21008..213111696845614.6518633-CDS-H-canaliculatus_F_contig1211:21008..21311Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 21009..21311 +
1622928925.085179-CDS-H-canaliculatus_F_contig1211:23434..235601622928925.085179-CDS-H-canaliculatus_F_contig1211:23434..23560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 23435..23560 +
1696845614.6624348-CDS-H-canaliculatus_F_contig1211:23434..235601696845614.6624348-CDS-H-canaliculatus_F_contig1211:23434..23560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 23435..23560 +
1622928925.1093085-CDS-H-canaliculatus_F_contig1211:24075..241661622928925.1093085-CDS-H-canaliculatus_F_contig1211:24075..24166Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 24076..24166 +
1696845614.6713588-CDS-H-canaliculatus_F_contig1211:24075..241661696845614.6713588-CDS-H-canaliculatus_F_contig1211:24075..24166Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 24076..24166 +
1622928925.1218078-CDS-H-canaliculatus_F_contig1211:24750..251421622928925.1218078-CDS-H-canaliculatus_F_contig1211:24750..25142Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 24751..25142 +
1696845614.6838932-CDS-H-canaliculatus_F_contig1211:24750..251421696845614.6838932-CDS-H-canaliculatus_F_contig1211:24750..25142Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 24751..25142 +
1622928925.1360974-CDS-H-canaliculatus_F_contig1211:25656..258411622928925.1360974-CDS-H-canaliculatus_F_contig1211:25656..25841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 25657..25841 +
1696845614.6922743-CDS-H-canaliculatus_F_contig1211:25656..258411696845614.6922743-CDS-H-canaliculatus_F_contig1211:25656..25841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 25657..25841 +
1622928925.1505876-CDS-H-canaliculatus_F_contig1211:26643..267941622928925.1505876-CDS-H-canaliculatus_F_contig1211:26643..26794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 26644..26794 +
1696845614.7021966-CDS-H-canaliculatus_F_contig1211:26643..267941696845614.7021966-CDS-H-canaliculatus_F_contig1211:26643..26794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 26644..26794 +
1622928925.1682901-CDS-H-canaliculatus_F_contig1211:27528..278281622928925.1682901-CDS-H-canaliculatus_F_contig1211:27528..27828Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 27529..27828 +
1696845614.7122107-CDS-H-canaliculatus_F_contig1211:27528..278281696845614.7122107-CDS-H-canaliculatus_F_contig1211:27528..27828Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1211 27529..27828 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1211.1832.1

>prot_H-canaliculatus_F_contig1211.1832.1 ID=prot_H-canaliculatus_F_contig1211.1832.1|Name=mRNA_H-canaliculatus_F_contig1211.1832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=533bp
MLSRLHLRQPVVQKTRQWSSITVAARRCHRSTTSATAAVATKIASRHSST
LVDIPRTRKELVDALPPIYPSDLCESIRRDEEAVGRVLVVLDDDPTGTQT
VHSVPVLAEWPVDVLAKELKSPGPYRVIYLNTNARALPPIEASRLFRTIA
TNLREACRITGVDVSMVSRGDSTLRGHFPSDLVALEDGMGVRHDAWIVAP
FFKAGGRITAGDIHFVEQQGSPDDNDAALIPAGDTEFAQDKAFGYRSSNL
VDWIHEKAAAGEAATEGGREQRSRPPAATERIVSVSLTDLRQGGPAAVRE
RLAEAQGGCVVVNAIEERDLQVFVKGMLEEELEGKRFLFRSAADLVAVRG
AVDRRPLLEAGDFQHLRAKAGMPGSDGGLTVVGSYVSKTTEQLEHALGAI
DATGVELRATEVVGGGEEGRAASRQEVERVRAEVSLQLSRGRDVILYTSR
GVPVQGDGAGGLLFGERVGTALVACVSGLTERPRFLLSKGGITSSDVATQ
GLGMKRAQVISASSHSFARCTYKCQIRNGVIR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1211:19859..28662+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1211.1832.1 ID=mRNA_H-canaliculatus_F_contig1211.1832.1|Name=mRNA_H-canaliculatus_F_contig1211.1832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8804bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1211:19859..28662+ (Hapterophycus canaliculatus Oshoro5f female)
GTCTGCTACACCACTGCACTGCTGGTGTCTGTGTGCTGTTTGCTTGCCTC GAACAGACTGCTGTAATTAAGGATATGCTCTCCCGCCTACATCTACGCCA ACCTGTGGTCCAGAAAACCCGTCAGGTGTGTGGATATGCAAATATGCCGC TTCCACCTCTTGTTCCGGGCCGAGTACAAGTAGTGATCATGACAAACTTG AATAGGCAATGTCTTCATATGACAAACTTGAATAAGCAGTGTCTTCTGTC ATTCCTGCGATGGACGAATCAATTAGCTCTCAGAATTACAACGCAGTTGA TGCTCTCGGGTGTACGAGCTGGTTGGTTGCAAGCTTGAACGTTTTTGCCA CCGATTCATTCGAGGCAATAGTGCATATCTAAGCCCATATCTCATTCCCA TGTGGAAATCGACGGAGGGGCACGGTGCGCCTCCCGCAGTTGAAGTTGCG TTTCTGCCTTGAATGACCCCCTTCAGCCTTTGGGTCCCGCGACGGTGCGC CTTCGACCGCGGCTTTTTTTCTTACGTCGGCTCTATGGAAGGCGTATGAG GCAGGAGCGGTCGTGCCCCGCACATGAGTTGCAGCCTGCAGGATACCTGC ACACGGCACACAAAAATGATCCATGCTGTTTGTTTTCAGGGCTTTCCACG GGTCATGACCTGACCTGCGGGTCAAATCAAACCTAATCGTAATACGAGTA TCGCAGGTCAGAAATCAAATCTCGGGTCACACCGTGAAGTACGCCTCATC TCGAAATGTGACCGCTTGTATGCGTCACCTCGCGTCTTCATGCCCATCGT GTAAAACATGACAAGCATTTCGCGTAGGATGCTGTTGCGCGGTTTGAAAG TAGGGTTCGCGTGCGCACCATCTTCCGGCGAGTGCATGCTCCCTGGAGAC AACTGCGATAGAGCTTTTGATAAGGGTCCTGTTGGAGCAAGGGTCCTGTT GGAGAATTCCTCGCTATTGCTTCGCTTGGGGGATCAGATGCCTCCTCACG TTGCACGTGCGAGTTCGGATGTCACATGCGAACACGATCTGTGCACGCGA AGAAATATTTGCACGCACCATCTTCTCTGACGCCCTCTCTTCTCTGACGC CCTCTCTACCGCCTTTTTCGCTTGCTCTGCTCGCTTCGTTGTCCAAACAG TGGTCATCGATCACAGTAGCTGCACGCCGATGCCATCGCTCCACCACTAG TGCCACTGCTGCCGTCGCAACCAAGATTGCCTCACGACATTCTTCAACAT TGGTGGACATACCGCGAACTCGAAAGGAGCTAGTGGATGCTTTGCCTCCA ATATATCCGTCGGATCTTTGCGAGAGTATTCGAAGAGATGAAGAGGCCGT GGGTCGAGTGCTGGTTGTGCTGGACGACGACCCTACTGGGACGCAAACTG TTCACAGCGTGCCTGTGCTCGCGGAGTGGCCTGTGGACGTCCTCGCCAAA GAGGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCG GATACTTGTTCCCGCCCACGTTATCACATGTTCTTTCAACATCTAAGTGA TACAGCGGTGTTTATGGTCAGCTTGACGGTTTGGTTCGAAGAGCTTTCTT CCACGTCGTTCAGCTGTCTGCCTTAGTGTTGGATTCCAGCGTTCAAGTCA GATTGTGTTTGAGCACAAAAGCAAACCATTGTAATCTTGGTGAGCATATG ATACTTTCCTTGTAATAGCCTTGGAGGTGGCCAATCGAATGCTGTCGGGT CCGCTTGGGTAGCCTCCGGCTCACACCCCGATAAGCAACATGGTTTTCTC GGTAATGTAACGACTACGCTCCCTGTCGCTTGAGGCCACGACAGCCACTG GGACCTTTTGATCCACGTGTATCGAGCCGGAGCGAAAATTGCCACACATA CTCTTGATCCTCCCGCTCTGAACACGGTCTGGTGTCTCCGCTTCATGCGC ATGAATTAAAAATCGTATCCGTCTGGTGACGTATGACGTTGGATATAAAT ATGTGGTGACGTGCGCGTGAAGGCGAACGGAGTCGGTGGGCTTCCACACA GGAAACCCAATTGCGGCTCCGTGAAATAATTTGTATGATTATCTCCTCCT CCTTTTCCATGCGGGGTGCAGATGACGGGAGCTGAGTGCCGTGTAGAGTT AGATTTTGCAGGGCTGTAGACCCACAGCATGCGGTGTGGCAAAACACTCA AAATTTCACACCCTGTACAACTACAGTAGTTGGTAGTTATCTGGCAGACA ACTGCTTCTTGAAGAATTTGCGCAACTATTTGTCTGTAGGCATCTACATG TCGAAGAAGCTGCGCAGCTCTTTGTCTCCAGGCAACTACTTGTCGAAGAA GCTGCGCATCTATTTGTCTGCAGGCAACTCTTGTTGTGAGAAGCTGCGCA ACTATTTGTCTGCAGGCAACTGCTGTTGTGAGAAGCTGCGCAACTATGTG TCCACAGGCAACCAATGTTGTAAGAAGCTTCGCAACTATTTGTCTGCAGC TGACTACACTCTTGAGATGATGCGCAACTATTTCTCTGCGGACACCTACT CTTTCGCGATTCTGCGCAACTAGTTGTCTGCAGACGACTGCTCTTTTGAA AAGCTGCGCAACAATTTTTCTGCGGACAACTGTTCTTATGAAATTCTGCG CAATTCTTAGTTGTTTTTGTCCTGACAACCATGCTTTTGGACAAAGCCGC GCCATTCATCCGTTTGCGCATACTCCGGAGTATTATGGTTGTCTGACACC TTTCAGACCGCGAAACGTGGGCGATTACGATGCAACAAAGTAAACGTGTA CTGAGTGACTGTTAGTTGCCGCCCCACCGCTGTTCCGCCCGTGGTTGAAA GAGAGGGAGTGGGGGGTCGGAGGGATCCTGGTATTGTATCATGCGATGGC TACTTGGTATCGAAAACGCACAGACTTAAATGAGTGAATGTGTGCCGCTG ACATGTTGAGACGGGACCCACGTGTGGGTGTTGTTCGTGCTTCACTGTGG CGCTGGTGGTGGCTATGTGCAGCACCGCTGTATTTTTGTCGCAACTGGTC CCAGCTGCCGTCGGCTGAAGAGGTCAAGCTCGACGGTCTCCTCTAAATAT CTCCGCATCTACGTGTCTCCGGATCTCTCGCAAGTTGTTCACAGTTGTCT GGACAACTTTTGTTTTGAAAACCTGCGCAAATATTTGTCGGCAGACAACT ACTGCTTGAACAAGCTGCGCAACTATTTGTCTCCATGCAACCACCGTTGT GAGAAACTGCGCAACTATTTGTTTGCAGACAACTACTCTGTTGAGATGCT GTACAACTAATTGTTTGTGGACACCTACTCTGTTGAGATGCTGTGCAACT AGTTGTCTACAGACGAGAGTTGTCCTGGACCGCTGCACGCAACTACTACT ATTTGTTAGCTGTAGTTGTACAGGATGTGAAATATTAAAAGCACCAATGA ACGAAGCGGGGATACCAACGTAATTTGATCATCTACAAAAAACACCCGGA CGGTACTGAGTGATGTAGACCTCTTTTTTACCGTTACCCTCTTTGTCGCA TGGTTCCCGCAACCTAAATGTGACAGCTCAAGTCTCCCGGGCCGTACCGT GTGATTTATCTGAACACCAACGCGAGAGCACTGCCGCCAATCGAGGCCTC CAGGCTGTTCAGAACAATCGCCACAAACCTCAGAGAGGCGTGCCGCATCA CGGTGAGATATGTCGCATCTTGCACGTTCCTGCTAGGGTTCTCTGCTGAA GAACAGGTTGCAGTAATTTCAGCTGTCTCAGCTATCTGGCGCTGTCACTT CTCCTGTCGTGTGGCAGGGAGTTAGGCAAACCACCGTCGAGGTCGCTTAG TTGGAGTAAAACATCTTTATGCACTCGACAAAGGCCGTAGATCGCGAGTG TTGAGCTAGAGTTTTTTTCGTCTCGTTCGATGGGAATGGTGAAGCGGCGA TAGGTCATGTGCGTGATCTGAAACCATCGCACCTCGACTTGTTGCGAAAC TGTGGCGGACAATACCCAAGATGCTGTCATAATGCTGTGTCACGTTGCGA TGATCGGTCCAGGTATCGCTGTTTACTCGTAGATTTATGAGGTTCGTAAA AGGCTGATTCCTTTAGGCTTCGCTCTGTACGCCGTGCTCCTCTAGCATTG ATGCGTTGATGCATATTGCACTCATCCCATTGTCGATGTTCCACGCCCAC CATATATGTTCCGCCAGGGTGTGGATGTGTCGATGGTGTCCAGAGGAGAT TCCACCTTGAGGGGCCATTTTCCCAGCGATCTGGTTGCATTGGAGGATGG GATGGGAGGTGAGTGATGACCTTGTTACAAACACTTCTTGGGGCCGGACT TTTCACACCAAGGTACCGCTCGAGACACTGCTTTACTCCACCATGCTATC GCTCGCGCGACGCTGTACATGCTGGATAGAGGAAGTGGCGAGCTTCCAAA CATGGCGTTATAAATTGTTGTATGTGCTGGCGTTGTTCACAACCACATCG CGAATATGTTTCCGATCGCACATTAGCTTCATGTCGTCAACAAATGAAAG GGCAGCGTAATGTTGTTGGAATCCGTCAGAGGCCGATATTGCAATTCCCA TACGATGACGTGCCTCACATGCTTATGCTCTCACGTAACCTTGCCCAAGT GTATGTAGGCGGTCTTCACAGGAGATGTTGGCAGTTGGCACGCGACCAAG CATTCTTTCGGGTGCTGCACCGCAAGCGAATCCAAGCTGCATACCCAGTA CTCCGCGCCTCGCGGCACCTGAAGCGTCCTTTTCGGCGTTTCGATCGGCA TTCGGCGTCCAAATCACGAAGTCTAACATCGTCACCGTGAGCATCATGAC GTCACCGCCGCCAAAAAAACACCACCGCTAAACCGTTTTCAGTTCGGCAC GACGCTTGGATTGTGGCCCCCTTTTTCAAGGCCGGTGGTAGGATCACCGC CGGTGACATCCATTTCGTCGAGCAGCAAGGATCACCAGACGACAACGACG CCGCTCTTATCCCCGCGGGAGACACCGAATTTGCCCAAGACAAAGCTTTC GGTTACCGCTCTTCCAACCTTGTCGACTGGATTCACGAGAAGGCGGCGGC GGGAGAAGCAGCGACGGAGGGTGGTCGCGAGCAGAGGAGCCGCCCCCCCG CTGCAACGGAACGCATCGTCTCCGTATCCCTTACCGATTTACGCCAAGGC GGACCCGCGGCCGTGAGAGAGCGGCTTGCCGAAGCGCAGGGAGGCTGCGT GGTGGTCAATGCCATCGAGGAACGAGATCTACAGGTGGGCTGAGCTAAGC TGGGACCGATTGAGCGTAGTCGAGCTGGCGTGAGCTCGCCTGATGTTCCC TGTATTTTGCGTTTGTTTTCCCAATGCTCTTCTCGTTGCAGCGGACAAGG GTCGTTCGAAAGTCGTCATCGAGGTCGGCCTTCACCCGACTCGAAAGCTC TATAGGTTGCCATAGGGGAGATTTGTGTGGGGCTGTTGTCAGGAACCCAG GAGCTGGAGCAGCGAAGAACTGGGGATGGCAAGGGCTTCAGAAACGTAGG GATAGGGGCTGTTCAGCACAAATTCATCCATCACGCGATCCCATACCCGC TGCTGTCGTGGGCACGCAGTACTTCCACGAACAGCACTTGTCAGGACCTA CCAGGTACATGTCAGACGCCCATCTGATCATCGCGTAAGGTGAAGGCTCG GCTACGTATACTTTTTGTCATGCTTTGATGCCCATGTGGCAAGTCTAGAT CCATCATAACGTTGAAACATACTCTTTCCTTCTCCATTGGTGAAAAAGGT CTTCGTCAAAGGGATGCTTGAAGAGGAGCTAGAGGGGAAGAGGTTTTTGT TTCGGAGCGCTGCCGACCTTGTTGCAGTTCGGGGTGCTGTCGACCGGCGG CCTCTACTTGAGGCCGGGGACTTCCAGCACTTGAGAGCGAAAGCAGGCAT GCCTGGAAGCGATGGTGGGCTTACGGTTGTGGGGTAAGATATCGGTGCAT ACGAAATGAACCATTGACCACGCCAATGGTTTGTGTTGATTTTGCGAAAT CCTGGTTTCGAACCACTCCTATCTTCGTGGGATGATTGAGGCGGAAGGAA AGCAAACCTCGAAGAGTCGAAGACTCGAAGAGCGAAGCGAGCCCGAGAGC CTCTTCTTGTTTCATCTGAGCAGGACAGGACTTCGGTTGCGCACTCGAAA GAGAGTGAGATATTCCCTTAGGTCGCCTTCGAACCTTAAGTGGTCTGCCA GATTCCAAGAAGGGGTCGCACTTATCGTACTGGAGGCAAGACACCGCCGC ACGCCCCTTACCCACAACTGTGCGAGCCGCGGTGCGAGGTGTGCTCTGCT GCTGACTCTCGACTGGGCGACTGTAGGCCACAGACGGTACAATGACTGCA AATGGTCTTTGTGCCATCTTGCCTCCGCCTGGTGGGGACAGCGCTGTTCT TCGAAGAAATAGGATCGAACGCGAGGAAGCGTAGTGGACGAAGAAGGCTT CCTGGAATTGGCACAGCGCTTTCGTTTTACACCAACAGGAACACGAAACT GCATCTGGAACACCGCATGTCGGGGCGGGTAATCGTTGAATCTGGGTCTA ATTTCGCCCTCCACGTAAATAGGCGCGGAAGGTTGTCGACGTGTCAGAAA GTTGGCCTGTAAATCCTGAAGCAACTGCCTCTGCAGCAACAACCAAAGCT AATACAGTACAGCTAACCCTCAGCAGTTTCATATCCCAGTGACTCTTCCT GTGACCGCCCCTTCGACACATTCACCGACCACGAGGTCTTACGTTTCGAA AACGACGGAACAGCTAGAACATGCGTTGGGTGCCATCGACGCGACCGGGG TAGAGCTTCGTGCGACCGAGGTGGTGGGTGGAGGCGAGGAGGGGAGAGCG GCGTCACGCCAGGAAGTGGAGAGAGTTCGCGCAGAAGTGAGTGATCGCGC CAGAGCGTCGTTTGCACGAGCTCCTCCTTTGTGTATGGGACGGTGGCGTC GTTGATCTTCCCATCTTTGCCGTGGGATTTGTTATTGCGAAACGGCAACG GAATTCCTGGGCTCACGTTGTTTCTCGCGATCTTGTTCATAAAAAGAGTC GCCCGCGAACTATCGGAGACAGTCCTAACTGTGTGGTGATTTGTCGGTTG AGCTTTTGTGTGGTGGCTGCCATATGTTTCCAAGATGAATGCCCATCACC CCGTACTCACGGGCCCATCTTGTTCAGGGATTTCTTTCGGCGCCCGTGGA ACACATCATTTGCAGCGCTGGACATCTTGCGGCGCCCTGCCTTTGGTCTG GTTGAGTTGCTTCCAAGGTGGAGGGCTGCGCTGCACCTTTCGCGTTGATT GCGGAGTTTTCTTTTCGGATGCAAACCTATTGCCCCTGTTAAGACCCCCC CACGGGTGATAAGGCGCTATCAACGTAATTACGCCGTGTTCTGCTTGTTC GGAGGTGCCGACTGTTTTCTTCTTGTTATCCTTTGAAAGAACGGCCGCCA CCTTGTGAAGCTCATACAGCGTCCTACTGCTGCTGCCCGTGCGTACACTG TAAGCTCTTCCAGTCACTTTCGAGTTTCGTGCTCTTCGCGGAAATCATCG CAATGATTTGCTCTGACATCCCTCCGAACTGCGCCTCCCGCCGTTCACCT GGTACCCTCTTCCTTGCAAGGTAAGTCTCCAACTTTCGCGTGGGCGTGAC GTCATCCTCTACACCAGTCGAGGAGTGCCCGTGCAGGGAGACGGAGCCGG AGGTCTCTTGTTTGGCGAGCGTGTGGGGACCGCCTTGGTGGCATGCGTGT CTGGACTCACTGAACGACCCCGCTTTCTCCTCTCCAAGGGAGGCATCACA TCAAGCGACGTAGCCACGCAGGGGCTGGGCATGAAAAGGGCGCAGGTGAT TTCTGCTTCATCGCATTCGTTTGCTCGCTGCACTTACAAATGCCAGATTC GAAACGGTGTGATTCGATGAAAAAAGTATGTGGTGCGCGCGTTCTTGCCT AGAGCACTGAACGTCCTGTCTCAGTCTGTGCTCCATCAAACAACCCCAGT TGTATTTGACCATCGTAAACAAGACAGGCTTGTGAAGCACCCTAGACATG TAAGTCAGCTACAGGACAGAAATGTGGGTCCTTTACTACTCCGCGAGTTT CACCCATGCACTTTCCCCTGCAATGTTCAAATTGCTTAGAGAAAAAGAGC GAATAACACGGAAGAAATGGCTTCTGAGACACGGCTCAGCAGGAGTGTCA GCTTGTATCGGATTCCACACAGTGAGGGTAGGCTTCACTGGACAGGAAAA AAAAGTGACGCGAGCAGAGGGCTGCGCGGGTCCAAAGGGTGGAATACACA TAGATTCTGATGAGATGGTTGTGGTTGAAATGACATGTGTGATGCATTTC TCCTGGCTCATGTACTTCATGAGTCGCCAAGTGAATGAGTTTGCTGTCCA GGCAATTGTTTATCCGCGTCTCGAAAGTATGTCAGTCGTGGAGCTGGTGG GAGGAAGTAGGTGGTAGCCATGAAGAGAAGAATCAGCGTGCAGATGACTA TCCTTGCTTGCCGTCCGAGTGGTGAATTTGACGAATTTGACTCGAATTTA TTCACACCTGCGAGCACGCATGAGTATTTCGAAGCAGGCTTGTAGCAAGA GATAATGTAGGGAGAGAGACAACACGCTTTCAACCGTTTTCACAAAGCCT CCATTCTCGAGCCAGAGAGCAGCGTAGTACACATCGGCGAGATACAAAAG CCGACTGCGCCGAACATGAATAGGAGGGCGTGCGGGGAGCTATTGCGGAA TGGC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1211:19859..28662+

>mRNA_H-canaliculatus_F_contig1211.1832.1 ID=mRNA_H-canaliculatus_F_contig1211.1832.1|Name=mRNA_H-canaliculatus_F_contig1211.1832.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3198bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1211:19859..28662+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCTCTCCCGCCTACATCTACGCCAACCTGTGGTCCAGAAAACCCGTCA
GATGCTCTCCCGCCTACATCTACGCCAACCTGTGGTCCAGAAAACCCGTC
AGTGGTCATCGATCACAGTAGCTGCACGCCGATGCCATCGCTCCACCACT
AGTGCCACTGCTGCCGTCGCAACCAAGATTGCCTCACGACATTCTTCAAC
ATTGGTGGACATACCGCGAACTCGAAAGGAGCTAGTGGATGCTTTGCCTC
CAATATATCCGTCGGATCTTTGCGAGAGTATTCGAAGAGATGAAGAGGCC
GTGGGTCGAGTGCTGGTTGTGCTGGACGACGACCCTACTGGGACGCAAAC
TGTTCACAGCGTGCCTGTGCTCGCGGAGTGGCCTGTGGACGTCCTCGCCA
AAGAGTGGTCATCGATCACAGTAGCTGCACGCCGATGCCATCGCTCCACC
ACTAGTGCCACTGCTGCCGTCGCAACCAAGATTGCCTCACGACATTCTTC
AACATTGGTGGACATACCGCGAACTCGAAAGGAGCTAGTGGATGCTTTGC
CTCCAATATATCCGTCGGATCTTTGCGAGAGTATTCGAAGAGATGAAGAG
GCCGTGGGTCGAGTGCTGGTTGTGCTGGACGACGACCCTACTGGGACGCA
AACTGTTCACAGCGTGCCTGTGCTCGCGGAGTGGCCTGTGGACGTCCTCG
CCAAAGAGCTCAAGTCTCCCGGGCCGTACCGTGTGATTTATCTGAACACC
AACGCGAGAGCACTGCCGCCAATCGAGGCCTCCAGGCTGTTCAGAACAAT
CGCCACAAACCTCAGAGAGGCGTGCCGCATCACGCTCAAGTCTCCCGGGC
CGTACCGTGTGATTTATCTGAACACCAACGCGAGAGCACTGCCGCCAATC
GAGGCCTCCAGGCTGTTCAGAACAATCGCCACAAACCTCAGAGAGGCGTG
CCGCATCACGGGTGTGGATGTGTCGATGGTGTCCAGAGGAGATTCCACCT
TGAGGGGCCATTTTCCCAGCGATCTGGTTGCATTGGAGGATGGGATGGGA
GGGTGTGGATGTGTCGATGGTGTCCAGAGGAGATTCCACCTTGAGGGGCC
ATTTTCCCAGCGATCTGGTTGCATTGGAGGATGGGATGGGAGTTCGGCAC
GACGCTTGGATTGTGGCCCCCTTTTTCAAGGCCGGTGGTAGGATCACCGC
CGGTGACATCCATTTCGTCGAGCAGCAAGGATCACCAGACGACAACGACG
CCGCTCTTATCCCCGCGGGAGACACCGAATTTGCCCAAGACAAAGCTTTC
GGTTACCGCTCTTCCAACCTTGTCGACTGGATTCACGAGAAGGCGGCGGC
GGGAGAAGCAGCGACGGAGGGTGGTCGCGAGCAGAGGAGCCGCCCCCCCG
CTGCAACGGAACGCATCGTCTCCGTATCCCTTACCGATTTACGCCAAGGC
GGACCCGCGGCCGTGAGAGAGCGGCTTGCCGAAGCGCAGGGAGGCTGCGT
GGTGGTCAATGCCATCGAGGAACGAGATCTACAGTTCGGCACGACGCTTG
GATTGTGGCCCCCTTTTTCAAGGCCGGTGGTAGGATCACCGCCGGTGACA
TCCATTTCGTCGAGCAGCAAGGATCACCAGACGACAACGACGCCGCTCTT
ATCCCCGCGGGAGACACCGAATTTGCCCAAGACAAAGCTTTCGGTTACCG
CTCTTCCAACCTTGTCGACTGGATTCACGAGAAGGCGGCGGCGGGAGAAG
CAGCGACGGAGGGTGGTCGCGAGCAGAGGAGCCGCCCCCCCGCTGCAACG
GAACGCATCGTCTCCGTATCCCTTACCGATTTACGCCAAGGCGGACCCGC
GGCCGTGAGAGAGCGGCTTGCCGAAGCGCAGGGAGGCTGCGTGGTGGTCA
ATGCCATCGAGGAACGAGATCTACAGGTCTTCGTCAAAGGGATGCTTGAA
GAGGAGCTAGAGGGGAAGAGGTTTTTGTTTCGGAGCGCTGCCGACCTTGT
TGCAGTTCGGGGTGCTGTCGACCGGCGGCCTCTACTTGAGGCCGGGGACT
TCCAGCACTTGAGAGCGAAAGCAGGCATGCCTGGAAGCGATGGTGGGCTT
ACGGTTGTGGGGTCTTCGTCAAAGGGATGCTTGAAGAGGAGCTAGAGGGG
AAGAGGTTTTTGTTTCGGAGCGCTGCCGACCTTGTTGCAGTTCGGGGTGC
TGTCGACCGGCGGCCTCTACTTGAGGCCGGGGACTTCCAGCACTTGAGAG
CGAAAGCAGGCATGCCTGGAAGCGATGGTGGGCTTACGGTTGTGGGGTCT
TACGTTTCGAAAACGACGGAACAGCTAGAACATGCGTTGGGTGCCATCGA
CGCGACCGGGGTAGAGCTTCGTGCGACCGAGGTGGTGGGTGGAGGCGAGG
AGGGGAGAGCGGCGTCACGCCAGGAAGTGGAGAGAGTTCGCGCAGAAGTC
TTACGTTTCGAAAACGACGGAACAGCTAGAACATGCGTTGGGTGCCATCG
ACGCGACCGGGGTAGAGCTTCGTGCGACCGAGGTGGTGGGTGGAGGCGAG
GAGGGGAGAGCGGCGTCACGCCAGGAAGTGGAGAGAGTTCGCGCAGAAGT
AAGTCTCCAACTTTCGCGTGGGCGTGACGTCATCCTCTACACCAGTCGAG
GAGTGCCCGTGCAGGGAGACGGAGCCGGAGGTCTCTTGTTTGGCGAGCGT
GTGGGGACCGCCTTGGTGGCATGCGTGTCTGGACTCACTGAACGACCCCG
CTTTCTCCTCTCCAAGGGAGGCATCACATCAAGCGACGTAGCCACGCAGG
GGCTGGGCATGAAAAGGGCGCAGGTGATTTCTGCTTCATCGCATTCGTTT
GCTCGCTGCACTTACAAATGCCAGATTCGAAACGGTGTGATTCGATGAGT
AAGTCTCCAACTTTCGCGTGGGCGTGACGTCATCCTCTACACCAGTCGAG
GAGTGCCCGTGCAGGGAGACGGAGCCGGAGGTCTCTTGTTTGGCGAGCGT
GTGGGGACCGCCTTGGTGGCATGCGTGTCTGGACTCACTGAACGACCCCG
CTTTCTCCTCTCCAAGGGAGGCATCACATCAAGCGACGTAGCCACGCAGG
GGCTGGGCATGAAAAGGGCGCAGGTGATTTCTGCTTCATCGCATTCGTTT
GCTCGCTGCACTTACAAATGCCAGATTCGAAACGGTGTGATTCGATGA
back to top