prot_H-canaliculatus_F_contig12099.1813.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12099.1813.1
Unique Nameprot_H-canaliculatus_F_contig12099.1813.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length40
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12099.1813.1 vs. uniprot
Match: A0A6H5KIY4_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.130e-18
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 
Query:    1 MGAAWIHGTTKNPITALCEKFSLSLFNTGSPTLMVDHDGR 40
            MGAAWIHGTTKNPITALCEKFSL LFNTGSPT+MVDHDGR
Sbjct: 1016 MGAAWIHGTTKNPITALCEKFSLGLFNTGSPTVMVDHDGR 1055
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BLAST of mRNA_H-canaliculatus_F_contig12099.1813.1 vs. uniprot
Match: D8LQQ1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ1_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.130e-18
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0 
Query:    1 MGAAWIHGTTKNPITALCEKFSLSLFNTGSPTLMVDHDGR 40
            MGAAWIHGTTKNPITALCEKFSL LFNTGSPT+MVDHDGR
Sbjct:  805 MGAAWIHGTTKNPITALCEKFSLGLFNTGSPTVMVDHDGR 844
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12099.1813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIY4_9PHAE2.130e-1895.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LQQ1_ECTSI2.130e-1895.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12099contigH-canaliculatus_F_contig12099:131..250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12099.1813.1mRNA_H-canaliculatus_F_contig12099.1813.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12099 131..274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12099.1813.1 ID=prot_H-canaliculatus_F_contig12099.1813.1|Name=mRNA_H-canaliculatus_F_contig12099.1813.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=40bp
MGAAWIHGTTKNPITALCEKFSLSLFNTGSPTLMVDHDGR
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