prot_H-canaliculatus_F_contig12097.1812.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12097.1812.1
Unique Nameprot_H-canaliculatus_F_contig12097.1812.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length103
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12097.1812.1 vs. uniprot
Match: A0A6H5KWA2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWA2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.920e-7
Identity = 26/86 (30.23%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:   14 LLHEHPERVVQDHARAYSLISSSVAGTDLDERLQSCSTEAEAWRVLHEWVLPSTLAQKHLLKEQFNSVPFPVGGHPNAFSAKLDRL 99
            L  ++  ++V +H R +S I  +  G  L+ ++ SC + AEAWR++ +W LPS  A   LL  + ++V      +P  F +++ +L
Sbjct:  149 LTRQYGAQLVVEHKRTWSFILEAAVGGPLENKMYSCHSVAEAWRMMADWFLPSHPADCQLLVAELDTVTMNNDENPKLFCSRVAQL 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12097.1812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWA2_9PHAE4.920e-730.23Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12097contigH-canaliculatus_F_contig12097:155..463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12097.1812.1mRNA_H-canaliculatus_F_contig12097.1812.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12097 155..622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12097.1812.1 ID=prot_H-canaliculatus_F_contig12097.1812.1|Name=mRNA_H-canaliculatus_F_contig12097.1812.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=103bp
IGPVRVISSSRDTLLHEHPERVVQDHARAYSLISSSVAGTDLDERLQSCS
TEAEAWRVLHEWVLPSTLAQKHLLKEQFNSVPFPVGGHPNAFSAKLDRLG
NM*
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