prot_H-canaliculatus_F_contig12090.1810.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12090.1810.1
Unique Nameprot_H-canaliculatus_F_contig12090.1810.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length105
Homology
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.620e-31
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 0
Query:    1 RSIDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAVLLKAARLKE 105
             SI+TL+ F+WL  VFDE H YKNP T K +A +KLV+AEVFIGLTGTL+QNNLDE+W ++N +Q GC+  ++ F  HFT PILRG +  A+   VLL   R+ E
Sbjct:  423 NSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDE 527          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI00117BE181 (DNA excision repair protein ERCC-6-like 2 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117BE181)

HSP 1 Score: 84.7 bits (208), Expect = 6.190e-17
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            +D     +W  VV DE H  KNP +   QA ++L   +V IGLTGT++QNNL+E WC+M+  Q+GCL    +F   F+ PI +G ++ A   AV
Sbjct:  246 LDQFNSIDWSAVVVDEAHKIKNPNSQITQAMKEL-RCQVRIGLTGTILQNNLEELWCVMDWAQSGCLGSLGHFKNKFSDPIEQGQRHSATKRAV 338          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI0009A3C3F5 (DNA excision repair protein ERCC-6-like 2 isoform X1 n=3 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3C3F5)

HSP 1 Score: 82.8 bits (203), Expect = 2.930e-16
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEA 91
            +D +  FEW  V  DE H  KNPK    QA  K +  ++ IGLTGT++QNN+DE WC+M+    GCL +R  F E F  PI  G ++ A
Sbjct:  257 LDDINCFEWSAVFVDEAHKIKNPKAQITQAL-KALKCKIRIGLTGTILQNNMDELWCVMDWAIPGCLGNRARFKEEFCNPIEFGQRHTA 344          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI00148C7EBF (DNA excision repair protein ERCC-6-like 2 n=3 Tax=Hippoglossus TaxID=8266 RepID=UPI00148C7EBF)

HSP 1 Score: 81.6 bits (200), Expect = 7.460e-16
Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    2 SIDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            S+D     +W  VV DE H  KNPK+   QA +++   +V IGLTGT++QNNL+E WC+M+    GCL +  +F   F+ PI +G ++     A+
Sbjct:  258 SLDQFNNIDWSAVVVDEAHKIKNPKSQITQAMKEM-KCKVRIGLTGTILQNNLEELWCVMDWAIPGCLGNLGHFKNKFSDPIEQGQRHSVTKRAL 351          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI001BD49BEA (DNA excision repair protein ERCC-6-like 2 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD49BEA)

HSP 1 Score: 81.3 bits (199), Expect = 1.020e-15
Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    2 SIDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            S+D     +W  V+ DE H  KNP +   QA ++L   +V IGLTGT++QNNL+E WC+M+    GCL +  +F   F+ PI +G ++ A   A+
Sbjct:  246 SLDQFNNIDWSAVIVDEAHKIKNPNSQITQAMKEL-RCKVRIGLTGTILQNNLEELWCVMDWAIPGCLGNLGHFKNKFSDPIEQGQKHSATKRAL 339          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI001CD8C6F0 (DNA excision repair protein ERCC-6-like 2 isoform X1 n=2 Tax=Solea senegalensis TaxID=28829 RepID=UPI001CD8C6F0)

HSP 1 Score: 81.3 bits (199), Expect = 1.020e-15
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            +D     +W  VV DE H  KNP +   QA ++L+  ++ IGLTGT++QNNL+E WC+M+  + GCL    +F   F+ P+  G ++ A   A+
Sbjct:  254 LDQFNNIDWSAVVVDEAHKIKNPNSQITQAMKELI-CKIRIGLTGTILQNNLEELWCVMDWARPGCLGSLGHFKNKFSDPVEHGQRHSATKRAL 346          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: A0A8J6FFJ7_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FFJ7_ELECQ)

HSP 1 Score: 80.9 bits (198), Expect = 1.370e-15
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEA 91
            +D L   EW  V+ DEVH  KNPK  +     K +  ++ IGLTGT++QNN++E WC+M+    GCL  R  F E ++ PI  G ++ A
Sbjct:  278 LDDLNSIEWSAVIVDEVHKIKNPKA-RVTEVMKALRCKIRIGLTGTILQNNMEELWCVMDWAVPGCLGGRTQFIEEYSHPIELGQRHNA 365          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: A0A667XQU1_9TELE (ERCC excision repair 6 like 2 n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XQU1_9TELE)

HSP 1 Score: 80.9 bits (198), Expect = 1.390e-15
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            +D     +W  V+ DE H  KNP +   QA + L   +V IGLTGT++QNNL+E WC+M+    GCL    +F   F+ PI +G +Y A   A+
Sbjct:  252 LDQFNSVDWSAVIVDEAHKIKNPNSQITQAMKDL-KCQVRIGLTGTILQNNLEELWCVMDWAIPGCLGSLGHFKSRFSDPIEKGQRYSATKRAL 344          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: UPI001CF17D00 (DNA excision repair protein ERCC-6-like 2 isoform X4 n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF17D00)

HSP 1 Score: 80.5 bits (197), Expect = 1.830e-15
Identity = 36/89 (40.45%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEA 91
            +D L   EW  V+ DEVH  KNPK  +   A K +  ++ IGLTGT++QNN++E WC+++    GCL  ++ F E ++ PI  G ++ A
Sbjct:  264 LDDLNSVEWSAVIVDEVHKIKNPKA-RVTGAMKALRCKIRIGLTGTILQNNMEELWCVVDWAVPGCLGGKKQFIEEYSHPIELGQRHNA 351          
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Match: A0A672GEA1_SALFA (Excision repair cross-complementation group 6-like 2 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GEA1_SALFA)

HSP 1 Score: 80.5 bits (197), Expect = 1.860e-15
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    3 IDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLIQNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAV 96
            ++     EW  VV DE H  KNP +L  QA ++L + +V IGLTGT++QNNL+E WC+M+    GCL    +F   F+ PI +G ++ A   ++
Sbjct:  250 LEQFNKIEWCAVVVDEAHKIKNPNSLITQAMKEL-ECKVRIGLTGTILQNNLEELWCVMDWAIPGCLGTLGHFKTQFSDPIEQGQRHSATKRSL 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12090.1810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIQ3_ECTSI1.620e-3156.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00117BE1816.190e-1742.55DNA excision repair protein ERCC-6-like 2 n=1 Tax=... [more]
UPI0009A3C3F52.930e-1644.94DNA excision repair protein ERCC-6-like 2 isoform ... [more]
UPI00148C7EBF7.460e-1640.00DNA excision repair protein ERCC-6-like 2 n=3 Tax=... [more]
UPI001BD49BEA1.020e-1540.00DNA excision repair protein ERCC-6-like 2 n=1 Tax=... [more]
UPI001CD8C6F01.020e-1538.30DNA excision repair protein ERCC-6-like 2 isoform ... [more]
A0A8J6FFJ7_ELECQ1.370e-1541.57Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
A0A667XQU1_9TELE1.390e-1540.43ERCC excision repair 6 like 2 n=1 Tax=Myripristis ... [more]
UPI001CF17D001.830e-1540.45DNA excision repair protein ERCC-6-like 2 isoform ... [more]
A0A672GEA1_SALFA1.860e-1540.43Excision repair cross-complementation group 6-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 3..93
e-value: 7.3E-13
score: 48.0
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..105
e-value: 1.7E-23
score: 84.7
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 3..99
NoneNo IPR availablePANTHERPTHR45629:SF1DNA EXCISION REPAIR PROTEIN ERCC-6-LIKE 2coord: 3..99
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12090contigH-canaliculatus_F_contig12090:2092..3505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12090.1810.1mRNA_H-canaliculatus_F_contig12090.1810.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12090 2092..3505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12090.1810.1 ID=prot_H-canaliculatus_F_contig12090.1810.1|Name=mRNA_H-canaliculatus_F_contig12090.1810.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=105bp
RSIDTLAGFEWLIVVFDEVHLYKNPKTLKAQAAEKLVDAEVFIGLTGTLI
QNNLDEFWCIMNMIQNGCLNHREYFTEHFTTPILRGMQYEANAEAVLLKA
ARLKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR038718SNF2-like_sf
IPR000330SNF2_N