prot_H-canaliculatus_F_contig12050.1788.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12050.1788.1
Unique Nameprot_H-canaliculatus_F_contig12050.1788.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length568
Homology
BLAST of mRNA_H-canaliculatus_F_contig12050.1788.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 3.600e-11
Identity = 122/278 (43.88%), Postives = 133/278 (47.84%), Query Frame = 0
Query:  246 DSVVPRRSLSPLSLPTLQWPSPVMPVGVGGGGPMMDGVXXXXXXXDHIGRGGPGGGRSASPFGMLSGPPPGLGXXXXXXXXXXSRPLRGGTREPP-------------------------VEAGAGPGHIXXXXXXXFRAPPGQPPS-----------------KRYRMVRGGSERGVSRRGGWSCRSQDVGTGDFSHP--SSCACVSLPPRXXXXXXXXXRGNGAPFLGTTYLSQSAPASSLFPQGSSVGSFDSSNALGAMLDGRHRGS-NGFVRVG 478
            D+VVPRRSLSPLSLPTL WPSPVM     GGGP  D  XXXXXXX           RS SPFG+LS       XXXX      + P RGGTR                            V  G G G  XXXXXXX                           KRYRM R G +  +S     +      G G  + P  SS     LPP XXXXXXX        FLG +Y+S S+PA S  P   SVGSFDSSNALGA+LD RHRGS NGFVR G
Sbjct:  324 DAVVPRRSLSPLSLPTLPWPSPVM-----GGGPGPDSHXXXXXXXXXXXXXXXXX-RSTSPFGLLSX----XXXXXXGEGAGGTIPRRGGTRXXXXXXXXXXXGHLXXXXXXXXXXXXGGVGVGVGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRYRM-RSGDDYNLSPSMSNNILGYGAGAGSLASPERSSPYRQGLPPPXXXXXXXLPNEQRPHFLGRSYVSASSPAPSHAP---SVGSFDSSNALGAILDARHRGSSNGFVRGG 587          
BLAST of mRNA_H-canaliculatus_F_contig12050.1788.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.160e-8
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 RETCTRSVKRKSGPAKGTKYTTRRSRMEAGIAEPINPKSK 40
            RETCTRSVKRKSGPAKGTKYTTRR RMEAGIAEP +  SK
Sbjct:   61 RETCTRSVKRKSGPAKGTKYTTRRVRMEAGIAEPASSSSK 100          
BLAST of mRNA_H-canaliculatus_F_contig12050.1788.1 vs. uniprot
Match: A0A6H5L858_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L858_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.090e-6
Identity = 74/159 (46.54%), Postives = 82/159 (51.57%), Query Frame = 0
Query:  394 VGTGDFSHP--SSCACVSLPPRXXXXXXXXXRGNGAPFLGTTYLSQSAPASSLFPQGSSVGSFDSSNALGAMLDGRHRGS-NGFVRVGSRGQAGNNYGVG-----GXXXXXXXRADQDLS-----AGDTGEALGYRRPQHEQEQGWEYTHPGPGMRFLP 539
             G G  + P  SS     LPP XXXXXXX        FLG +YLS S+PA S    G SVGSFDSSNALGA+LD RHRGS NGFVR G         G+G      XXXX   R DQDLS      GD G           Q+ G  ++    G RFLP
Sbjct:   10 AGAGSLASPERSSPYRQGLPPPXXXXXXXLPNEQRPHFLGRSYLSASSPAPS---HGPSVGSFDSSNALGAILDARHRGSSNGFVRGGGXXXR---VGIGIAPHXXXXXXSRRRPDQDLSPQGDNTGDAGAGAASSAMHARQQYGKAFSDH-QGKRFLP 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12050.1788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPZ9_ECTSI3.600e-1143.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE2.160e-887.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L858_9PHAE2.090e-646.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12050contigH-canaliculatus_F_contig12050:237..2904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12050.1788.1mRNA_H-canaliculatus_F_contig12050.1788.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12050 237..2904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12050.1788.1 ID=prot_H-canaliculatus_F_contig12050.1788.1|Name=mRNA_H-canaliculatus_F_contig12050.1788.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=568bp
RETCTRSVKRKSGPAKGTKYTTRRSRMEAGIAEPINPKSKNSSKPKPPRL
GQVVGGGRGGGRGAGRGGGRGGGRGGCATTAAIAAAAEGTPVRRGQQHHT
STAMASTFPANAGGPGGRGGAKGKDGRAGGVVTGGGGGGGLGGGGQLGHG
VVVGVSSSGANGGGGGGEMHSGSTLSSAHPHHDGGSLLSLGDGMSSPFSP
GRGGGGGGGVRGGGRSAGGGVLNNHGSEAGGIHHHHDHHRRQSSTDSVVP
RRSLSPLSLPTLQWPSPVMPVGVGGGGPMMDGVGVGPGGPDHIGRGGPGG
GRSASPFGMLSGPPPGLGGGGGGGGGGGSRPLRGGTREPPVEAGAGPGHI
PGHMPGHFRAPPGQPPSKRYRMVRGGSERGVSRRGGWSCRSQDVGTGDFS
HPSSCACVSLPPRPPPPPPPPPRGNGAPFLGTTYLSQSAPASSLFPQGSS
VGSFDSSNALGAMLDGRHRGSNGFVRVGSRGQAGNNYGVGGGGGGGGGRA
DQDLSAGDTGEALGYRRPQHEQEQGWEYTHPGPGMRFLPPPASPGGSRAS
VDERYGGGGGGNAAARWR
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