prot_H-canaliculatus_F_contig12041.1784.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12041.1784.1
Unique Nameprot_H-canaliculatus_F_contig12041.1784.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length134
Homology
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.600e-59
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGG-LSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            QVWTV+KRCVAQR E+LKDRHLHHV+LCSTYSVCKVN V PEVTFKRIIEQYKQLAGAGGG LSGGVGTPRLSV+KDILL+RG +        + AG E  GEP+QE+RGDIIKFYN VYIPAMKQ+VLEFK
Sbjct:  898 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLKRGHD--------EEAGGEGAGEPQQEERGDIIKFYNKVYIPAMKQFVLEFK 1021          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 3.160e-58
Identity = 106/133 (79.70%), Postives = 112/133 (84.21%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGG-LSGGVGTPRLSVIKDILLERG-TEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            QVWTV+KRCVAQR E+LKDRHLHHV+LCSTYSVCKVN V PEVTFKRIIEQYKQLAGAGGG LSGGVGTPRLSV+KDILL RG  EG GG   G        GEP QE+RGDIIKFYN VYIPAMKQ+VLEFK
Sbjct: 1050 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLRRGHDEGAGGGEGG--------GEPLQEERGDIIKFYNMVYIPAMKQFVLEFK 1174          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A5D6XSA8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSA8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.610e-26
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS---GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            QVWT VK C++    +LKDRHL  V+LCS Y VCKVN+VRPEVTFKR+I+ YK+L     G S   GG  TP       + L RG+              +L+ +   + RGDIIKFYN  YIP MK ++L+F+
Sbjct:  817 QVWTAVKECISSHHALLKDRHLDQVILCSLYGVCKVNNVRPEVTFKRVIDAYKKLHSQPAGTSSLHGGSATP-------VSLARGSSND------VIRNIKLDAD---DARGDIIKFYNRCYIPTMKVFMLQFQ 934          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A024GK70_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GK70_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.870e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 0
Query:    1 LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS--GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            +  QVWT VK C+    E++KDRH+ H++LCS Y VCKVN ++PEVTF+R+I+ YK+L      +   G +G+    +I+ I L   +      A+  ++ A  E  PR    GDIIKFYN  +I AMK ++L+F+
Sbjct:  817 ILNQVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIDVYKKLQTPHWAIHRPGTIGSTASDIIRHIRLVDAS------ASSNSSAAPRESVPR----GDIIKFYNKCFITAMKVFLLQFQ 942          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: F0WHE8_9STRA (Uncharacterized protein AlNc14C100G6011 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHE8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.070e-24
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0
Query:    1 LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS--GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            +  QVWT VK C+    E++KDRH+ H++LCS Y VCKVN ++PEVTF+R+IE YK+L      +   G  G+    +I+ I L   +       + K++ A  E  PR    GDIIKFYN  +I AMK ++L+F+
Sbjct:  813 ILNQVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIEVYKKLQTPHWAIHRPGTTGSTASDIIRHIRLVDAS------TSSKSSTAPRESVPR----GDIIKFYNKCFIAAMKVFLLQFQ 938          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A2D4CF97_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF97_PYTIN)

HSP 1 Score: 105 bits (263), Expect = 7.110e-24
Identity = 58/142 (40.85%), Postives = 77/142 (54.23%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQL-----------AGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            QVWT +K C++   ++LKDRHL  V+LCS Y VCKVN V+PEVTFKRII+ YK+L           A +   L+         VI+DILL+                        +  RGDIIKFYN  +IP MK ++L+F+
Sbjct: 1238 QVWTAIKECISTHHDLLKDRHLDQVILCSIYGVCKVNHVKPEVTFKRIIDAYKKLQTPHWSSNTNSAFSSASLARPSSQHNRDVIRDILLDD-----------------------RRSRGDIIKFYNRCFIPTMKVFLLQFQ 1356          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: K3WCJ4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCJ4_GLOUD)

HSP 1 Score: 103 bits (258), Expect = 3.270e-23
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGG-GLSGGVGTPRL------SVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            QVWT +K C++ +  +LKDRHL  V+LCS Y VCKVN VRPEVTFKR+I+ YK+L       ++ G  TP         +I++I L+                         + RGDIIKFYN  YIP MK ++L+F+
Sbjct:  894 QVWTAIKECLSSQHALLKDRHLDQVILCSLYGVCKVNHVRPEVTFKRVIDCYKKLQHPQSTAINHGNSTPTSLVRNSNEIIRNIKLD------------------------DDSRGDIIKFYNRCYIPTMKVFMLQFQ 1007          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A8K1CKQ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ6_PYTOL)

HSP 1 Score: 103 bits (257), Expect = 4.440e-23
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEK------------RGDIIKFYNNVYIPAMKQYVLEFK 134
            Q WT +K C++ + ++L+DRHL HVVLCS Y VCKVN V+PEVTFKRII+ YK+L            TP+  +        G+   G  AA  AA A                      RGDIIKFYN  +IP MK ++L+F+
Sbjct:  796 QAWTAIKECLSSQHQLLRDRHLDHVVLCSLYGVCKVNHVKPEVTFKRIIDCYKKLQ-----------TPQWGI-------HGSSAHGNNAAAHAAFASASISRNSHDIIREIKLDDHNTRGDIIKFYNRCFIPTMKVFLLQFQ 920          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A7S2GB36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GB36_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.590e-20
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 134
            Q+WT +K C+AQ  E++++RH+HH+VLC+TY +CK+  + PEV F  II +YK+L     GL           +  I+L   +E                       RGDIIKFYN VYIP MK  + +F+
Sbjct:   40 QIWTALKLCLAQCYELMRNRHVHHLVLCTTYGICKMKRLVPEVKFTTIIAKYKELRPCAKGL-----------VHHIVLHSESE-----------------------RGDIIKFYNKVYIPTMKIVLTQFQ 136          
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A1V9YMN7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMN7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.230e-16
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    4 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEG 88
            QVWT VK C++   E+L++RHL H++LCS Y VCKVN V PEVTFKR+ + YK+   A           + S+I++I L+ G +G
Sbjct:  642 QVWTCVKECISNHQELLRNRHLDHLILCSFYGVCKVNRVVPEVTFKRVTDAYKRTYPAAA---------KSSIIREIPLDHGVKG 717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8E5_ECTSI2.600e-5978.79Putative retinoblastoma n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHA1_9PHAE3.160e-5879.70RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A5D6XSA8_9STRA6.610e-2646.27Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024GK70_9STRA7.870e-2541.18Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
F0WHE8_9STRA1.070e-2441.91Uncharacterized protein AlNc14C100G6011 n=1 Tax=Al... [more]
A0A2D4CF97_PYTIN7.110e-2440.85Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WCJ4_GLOUD3.270e-2341.30Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CKQ6_PYTOL4.440e-2341.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2GB36_9STRA3.590e-2037.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9YMN7_9STRA3.230e-1645.88Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..134
e-value: 2.3E-29
score: 104.2
IPR002719Retinoblastoma-associated protein, B-boxPFAMPF01857RB_Bcoord: 3..127
e-value: 1.4E-26
score: 93.0
IPR028309Retinoblastoma protein familyPANTHERPTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDcoord: 3..133
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12041contigH-canaliculatus_F_contig12041:360..1666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12041.1784.1mRNA_H-canaliculatus_F_contig12041.1784.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12041 360..1666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12041.1784.1 ID=prot_H-canaliculatus_F_contig12041.1784.1|Name=mRNA_H-canaliculatus_F_contig12041.1784.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=134bp
LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKR
IIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGA
ELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR028309RB_fam
IPR002719RB_B