mRNA_H-canaliculatus_F_contig12041.1784.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12041.1784.1
Unique NamemRNA_H-canaliculatus_F_contig12041.1784.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.600e-59
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGG-LSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            QVWTV+KRCVAQR E+LKDRHLHHV+LCSTYSVCKVN V PEVTFKRIIEQYKQLAGAGGG LSGGVGTPRLSV+KDILL+RG +        + AG E  GEP+QE+RGDIIKFYN VYIPAMKQ+VLEFK
Sbjct:  898 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLKRGHD--------EEAGGEGAGEPQQEERGDIIKFYNKVYIPAMKQFVLEFK 1021
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 3.160e-58
Identity = 106/133 (79.70%), Postives = 112/133 (84.21%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGG-LSGGVGTPRLSVIKDILLERG-TEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            QVWTV+KRCVAQR E+LKDRHLHHV+LCSTYSVCKVN V PEVTFKRIIEQYKQLAGAGGG LSGGVGTPRLSV+KDILL RG  EG GG   G        GEP QE+RGDIIKFYN VYIPAMKQ+VLEFK
Sbjct: 1050 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLRRGHDEGAGGGEGG--------GEPLQEERGDIIKFYNMVYIPAMKQFVLEFK 1174
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A5D6XSA8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSA8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.610e-26
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS---GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            QVWT VK C++    +LKDRHL  V+LCS Y VCKVN+VRPEVTFKR+I+ YK+L     G S   GG  TP       + L RG+              +L+ +   + RGDIIKFYN  YIP MK ++L+F+
Sbjct:  817 QVWTAVKECISSHHALLKDRHLDQVILCSLYGVCKVNNVRPEVTFKRVIDAYKKLHSQPAGTSSLHGGSATP-------VSLARGSSND------VIRNIKLDAD---DARGDIIKFYNRCYIPTMKVFMLQFQ 934
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A024GK70_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GK70_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.870e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 1 
Query:    1 LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS--GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            +  QVWT VK C+    E++KDRH+ H++LCS Y VCKVN ++PEVTF+R+I+ YK+L      +   G +G+    +I+ I L   +      A+  ++ A  E  PR    GDIIKFYN  +I AMK ++L+F+
Sbjct:  817 ILNQVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIDVYKKLQTPHWAIHRPGTIGSTASDIIRHIRLVDAS------ASSNSSAAPRESVPR----GDIIKFYNKCFITAMKVFLLQFQ 942
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: F0WHE8_9STRA (Uncharacterized protein AlNc14C100G6011 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHE8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.070e-24
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 
Query:    1 LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLS--GGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            +  QVWT VK C+    E++KDRH+ H++LCS Y VCKVN ++PEVTF+R+IE YK+L      +   G  G+    +I+ I L   +       + K++ A  E  PR    GDIIKFYN  +I AMK ++L+F+
Sbjct:  813 ILNQVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIEVYKKLQTPHWAIHRPGTTGSTASDIIRHIRLVDAS------TSSKSSTAPRESVPR----GDIIKFYNKCFIAAMKVFLLQFQ 938
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A2D4CF97_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF97_PYTIN)

HSP 1 Score: 105 bits (263), Expect = 7.110e-24
Identity = 58/142 (40.85%), Postives = 77/142 (54.23%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQL-----------AGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            QVWT +K C++   ++LKDRHL  V+LCS Y VCKVN V+PEVTFKRII+ YK+L           A +   L+         VI+DILL+                        +  RGDIIKFYN  +IP MK ++L+F+
Sbjct: 1238 QVWTAIKECISTHHDLLKDRHLDQVILCSIYGVCKVNHVKPEVTFKRIIDAYKKLQTPHWSSNTNSAFSSASLARPSSQHNRDVIRDILLDD-----------------------RRSRGDIIKFYNRCFIPTMKVFLLQFQ 1356
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: K3WCJ4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCJ4_GLOUD)

HSP 1 Score: 103 bits (258), Expect = 3.270e-23
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGG-GLSGGVGTPRL------SVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            QVWT +K C++ +  +LKDRHL  V+LCS Y VCKVN VRPEVTFKR+I+ YK+L       ++ G  TP         +I++I L+                         + RGDIIKFYN  YIP MK ++L+F+
Sbjct:  894 QVWTAIKECLSSQHALLKDRHLDQVILCSLYGVCKVNHVRPEVTFKRVIDCYKKLQHPQSTAINHGNSTPTSLVRNSNEIIRNIKLD------------------------DDSRGDIIKFYNRCYIPTMKVFMLQFQ 1007
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A8K1CKQ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ6_PYTOL)

HSP 1 Score: 103 bits (257), Expect = 4.440e-23
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEK------------RGDIIKFYNNVYIPAMKQYVLEFK 402
            Q WT +K C++ + ++L+DRHL HVVLCS Y VCKVN V+PEVTFKRII+ YK+L            TP+  +        G+   G  AA  AA A                      RGDIIKFYN  +IP MK ++L+F+
Sbjct:  796 QAWTAIKECLSSQHQLLRDRHLDHVVLCSLYGVCKVNHVKPEVTFKRIIDCYKKLQ-----------TPQWGI-------HGSSAHGNNAAAHAAFASASISRNSHDIIREIKLDDHNTRGDIIKFYNRCFIPTMKVFLLQFQ 920
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A7S2GB36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GB36_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.590e-20
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGAELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK 402
            Q+WT +K C+AQ  E++++RH+HH+VLC+TY +CK+  + PEV F  II +YK+L     GL           +  I+L   +E                       RGDIIKFYN VYIP MK  + +F+
Sbjct:   40 QIWTALKLCLAQCYELMRNRHVHHLVLCTTYGICKMKRLVPEVKFTTIIAKYKELRPCAKGL-----------VHHIVLHSESE-----------------------RGDIIKFYNKVYIPTMKIVLTQFQ 136
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BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Match: A0A1V9YMN7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMN7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.230e-16
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:   10 QVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKRIIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEG 264
            QVWT VK C++   E+L++RHL H++LCS Y VCKVN V PEVTFKR+ + YK+   A           + S+I++I L+ G +G
Sbjct:  642 QVWTCVKECISNHQELLRNRHLDHLILCSFYGVCKVNRVVPEVTFKRVTDAYKRTYPAAA---------KSSIIREIPLDHGVKG 717
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12041.1784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8E5_ECTSI2.600e-5978.79Putative retinoblastoma n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHA1_9PHAE3.160e-5879.70RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A5D6XSA8_9STRA6.610e-2646.27Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024GK70_9STRA7.870e-2541.18Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
F0WHE8_9STRA1.070e-2441.91Uncharacterized protein AlNc14C100G6011 n=1 Tax=Al... [more]
A0A2D4CF97_PYTIN7.110e-2440.85Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WCJ4_GLOUD3.270e-2341.30Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CKQ6_PYTOL4.440e-2341.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2GB36_9STRA3.590e-2037.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9YMN7_9STRA3.230e-1645.88Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12041contigH-canaliculatus_F_contig12041:360..1666 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue8e-51
Seed eggNOG ortholog2880.D7G8E5
Preferred nameRB1
KEGG koko:K04681,ko:K06618
KEGG Pathwayko01522,ko04110,ko04218,ko04350,ko04934,ko05161,ko05165,ko05166,ko05167,ko05169,ko05200,ko05203,ko05212,ko05214,ko05215,ko05218,ko05219,ko05220,ko05222,ko05223,ko05224,ko05225,ko05226,map01522,map04110,map04218,map04350,map04934,map05161,map05165,map05166,map05167,map05169,map05200,map05203,map05212,map05214,map05215,map05218,map05219,map05220,map05222,map05223,map05224,map05225,map05226
KEGG ModuleM00692
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000082,GO:0000083,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000819,GO:0000902,GO:0000904,GO:0000976,GO:0000987,GO:0001047,GO:0001067,GO:0001085,GO:0001102,GO:0001558,GO:0001708,GO:0001894,GO:0001932,GO:0001933,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002761,GO:0002763,GO:0003170,GO:0003176,GO:0003179,GO:0003180,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006275,GO:0006325,GO:0006338,GO:0006349,GO:0006355,GO:0006357,GO:0006469,GO:0006725,GO:0006807,GO:0006915,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007062,GO:0007063,GO:0007064,GO:0007088,GO:0007093,GO:0007127,GO:0007129,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007507,GO:0007517,GO:0007519,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008285,GO:0008356,GO:0008589,GO:0008608,GO:0009410,GO:0009553,GO:0009555,GO:0009566,GO:0009567,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010016,GO:0010026,GO:0010033,GO:0010052,GO:0010090,GO:0010103,GO:0010374,GO:0010377,GO:0010389,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010965,GO:0012501,GO:0014070,GO:0014706,GO:0015630,GO:0016043,GO:0016514,GO:0016604,GO:0016605,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022414,GO:0022619,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030071,GO:0030097,GO:0030099,GO:0030154,GO:0030182,GO:0030218,GO:0030518,GO:0030521,GO:0030522,GO:0031134,GO:0031156,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031331,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0031625,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032102,GO:0032103,GO:0032268,GO:0032269,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032875,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033365,GO:0033613,GO:0033673,GO:0033993,GO:0034086,GO:0034088,GO:0034101,GO:0034349,GO:0034502,GO:0034613,GO:0034641,GO:0035189,GO:0035257,GO:0035258,GO:0035295,GO:0035556,GO:0035914,GO:0040008,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042551,GO:0042592,GO:0042692,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043353,GO:0043388,GO:0043393,GO:0043401,GO:0043433,GO:0043549,GO:0043550,GO:0043565,GO:0043900,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044798,GO:0044843,GO:0045132,GO:0045143,GO:0045165,GO:0045445,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045639,GO:0045649,GO:0045651,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045859,GO:0045862,GO:0045879,GO:0045892,GO:0045893,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048366,GO:0048367,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048565,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0048871,GO:0048872,GO:0050678,GO:0050680,GO:0050681,GO:0050727,GO:0050728,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051052,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051321,GO:0051338,GO:0051348,GO:0051402,GO:0051427,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055046,GO:0055123,GO:0060249,GO:0060255,GO:0060341,GO:0060537,GO:0060538,GO:0060548,GO:0061061,GO:0061676,GO:0061982,GO:0062033,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070603,GO:0070727,GO:0070887,GO:0070997,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071459,GO:0071466,GO:0071495,GO:0071514,GO:0071695,GO:0071704,GO:0071840,GO:0071922,GO:0071930,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090230,GO:0090329,GO:0090558,GO:0090575,GO:0090626,GO:0090627,GO:0090698,GO:0097159,GO:0097284,GO:0097718,GO:0098813,GO:0099402,GO:0120036,GO:0140013,GO:0140014,GO:0140110,GO:1900120,GO:1900122,GO:1901360,GO:1901363,GO:1901800,GO:1901970,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902099,GO:1902101,GO:1902105,GO:1902107,GO:1902494,GO:1902679,GO:1902680,GO:1902749,GO:1902806,GO:1902807,GO:1902903,GO:1902905,GO:1903046,GO:1903047,GO:1903052,GO:1903053,GO:1903055,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1903706,GO:1903708,GO:1903827,GO:1903866,GO:1903943,GO:1903944,GO:1904019,GO:1904026,GO:1904028,GO:1904035,GO:1904036,GO:1904760,GO:1904761,GO:1904949,GO:1905314,GO:1905634,GO:1905818,GO:1905820,GO:1990837,GO:2000026,GO:2000036,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000653,GO:2000677,GO:2000679,GO:2001141,GO:2001252
EggNOG free text desc.regulation of cell cycle
EggNOG OGsKOG1010@1,KOG1010@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03000
Hectar predicted targeting categorymitochondrion
Exons3
Model size402
Cds size402
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12041.1784.1prot_H-canaliculatus_F_contig12041.1784.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12041 360..1666 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928915.4245899-CDS-H-canaliculatus_F_contig12041:359..4011622928915.4245899-CDS-H-canaliculatus_F_contig12041:359..401Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 360..401 -
1696845611.4377477-CDS-H-canaliculatus_F_contig12041:359..4011696845611.4377477-CDS-H-canaliculatus_F_contig12041:359..401Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 360..401 -
1622928915.4446692-CDS-H-canaliculatus_F_contig12041:800..10651622928915.4446692-CDS-H-canaliculatus_F_contig12041:800..1065Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 801..1065 -
1696845611.4504387-CDS-H-canaliculatus_F_contig12041:800..10651696845611.4504387-CDS-H-canaliculatus_F_contig12041:800..1065Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 801..1065 -
1622928915.464643-CDS-H-canaliculatus_F_contig12041:1571..16661622928915.464643-CDS-H-canaliculatus_F_contig12041:1571..1666Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 1572..1666 -
1696845611.459165-CDS-H-canaliculatus_F_contig12041:1571..16661696845611.459165-CDS-H-canaliculatus_F_contig12041:1571..1666Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12041 1572..1666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12041.1784.1

>prot_H-canaliculatus_F_contig12041.1784.1 ID=prot_H-canaliculatus_F_contig12041.1784.1|Name=mRNA_H-canaliculatus_F_contig12041.1784.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=134bp
LFRQVWTVVKRCVAQRIEMLKDRHLHHVVLCSTYSVCKVNSVRPEVTFKR
IIEQYKQLAGAGGGLSGGVGTPRLSVIKDILLERGTEGRGGVAAGKAAGA
ELEGEPRQEKRGDIIKFYNNVYIPAMKQYVLEFK
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mRNA from alignment at H-canaliculatus_F_contig12041:360..1666-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12041.1784.1 ID=mRNA_H-canaliculatus_F_contig12041.1784.1|Name=mRNA_H-canaliculatus_F_contig12041.1784.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1307bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12041:360..1666- (Hapterophycus canaliculatus Oshoro5f female)
CTGTTTCGCCAGGTGTGGACGGTGGTCAAGCGGTGTGTGGCCCAACGGAT
AGAGATGCTCAAGGATAGACACCTTCATCACGTCGTGCTCTGCAGGTAAT
GAAACAAGACGTGGACGGATCAGTCGCGAAGGAACGGGTCTCTCGCCTGC
TCCCCCGATTGGAGCCCCCCAAATCCTGTCTACGCCCACGAAAGCCGGCT
GCATTCCCTCTGCTTTTCGTCCGTCCAGCGATGGGATTGATTGACCGCCA
AACTTTGTGCATGCGGCCAAGCTTCGTCTGAAAACGGACGGAGTGCCCAG
GGCGCTTTGGCCCTTCTCGCACCTGTGCGTGTTCGTTCCCTCCGCTCTGT
TCGGAGACCGTTTGGTGCCGACGAGGGAGGCGCCGTACATTTGTCTGGAG
CAACAAGCACAACAACGGTAGCCAGGAAACCATCGCCACCACTACCAACA
GCAACGCTTTACGAGCTTTCGAAATACCTGGTCCCCCTTCTCCTTACCCC
CCGCTGGGGCATCCTGTATTTTCCGTCGTCCCCCCGCGCCCGTCCATTTG
CCGCCGCCCTCCAACTGACCCCGAAAATCCACCGTCGGCTCTCGCCCACA
GCACGTACAGCGTGTGCAAGGTCAACAGCGTCAGGCCCGAAGTTACCTTC
AAGCGCATCATAGAGCAGTACAAGCAGCTCGCCGGGGCGGGCGGAGGTCT
GAGCGGCGGCGTGGGCACCCCCCGCCTCAGCGTTATCAAGGACATCCTCC
TCGAGAGGGGCACGGAGGGGCGGGGCGGGGTCGCGGCGGGGAAGGCTGCC
GGGGCGGAGCTGGAGGGAGAGCCCCGGCAAGAGAAAAGGGGAGACATCAT
CAAGTTTTACAACAATGTGGGTTGGGTCTTCGGGGAGGGGGAGGGGCGGG
GCAAAGCGCGAGCTAGTTGCCGCTTCGAGGATAGTCGTGTAGCGGCAGGG
TCCACGCCAGAGAAGAAGGTTCAAACAGGCCGGGATTAAAAGTGACGAGT
GTTTTCTTTTTCAATTGCACCTTCAGCAGCAACAAGAAGAAAGCCGGGCG
AGGGCCGACGAAAACAACAAGGCTCTTGTTTTTTCGTGTTGATTTATAGG
CAGGATTCCCAATATTTTTTTGCCTTTTTTACAAGTTGTTGCTTGGCGAC
TAAATCGTTGCGGCGTTATCTCCATGGCGTCTCTCGGCGTTGCCGACCGA
TCTTGTTTTTCCGTCTCCTGCCTCTCCGTCCGTCCCCCTGCCTGTCCGTG
GGACACCGTGTGCAGGTTTACATCCCCGCGATGAAGCAATACGTGCTCGA
GTTCAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12041:360..1666-

>mRNA_H-canaliculatus_F_contig12041.1784.1 ID=mRNA_H-canaliculatus_F_contig12041.1784.1|Name=mRNA_H-canaliculatus_F_contig12041.1784.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=804bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12041:360..1666- (Hapterophycus canaliculatus Oshoro5f female)
CTGTTTCGCCAGGTGTGGACGGTGGTCAAGCGGTGTGTGGCCCAACGGAT
AGAGATGCTCAAGGATAGACACCTTCATCACGTCGTGCTCTGCAGCTGTT
TCGCCAGGTGTGGACGGTGGTCAAGCGGTGTGTGGCCCAACGGATAGAGA
TGCTCAAGGATAGACACCTTCATCACGTCGTGCTCTGCAGCACGTACAGC
GTGTGCAAGGTCAACAGCGTCAGGCCCGAAGTTACCTTCAAGCGCATCAT
AGAGCAGTACAAGCAGCTCGCCGGGGCGGGCGGAGGTCTGAGCGGCGGCG
TGGGCACCCCCCGCCTCAGCGTTATCAAGGACATCCTCCTCGAGAGGGGC
ACGGAGGGGCGGGGCGGGGTCGCGGCGGGGAAGGCTGCCGGGGCGGAGCT
GGAGGGAGAGCCCCGGCAAGAGAAAAGGGGAGACATCATCAAGTTTTACA
ACAATCACGTACAGCGTGTGCAAGGTCAACAGCGTCAGGCCCGAAGTTAC
CTTCAAGCGCATCATAGAGCAGTACAAGCAGCTCGCCGGGGCGGGCGGAG
GTCTGAGCGGCGGCGTGGGCACCCCCCGCCTCAGCGTTATCAAGGACATC
CTCCTCGAGAGGGGCACGGAGGGGCGGGGCGGGGTCGCGGCGGGGAAGGC
TGCCGGGGCGGAGCTGGAGGGAGAGCCCCGGCAAGAGAAAAGGGGAGACA
TCATCAAGTTTTACAACAATGTTTACATCCCCGCGATGAAGCAATACGTG
CTCGAGTTCAAGGTTTACATCCCCGCGATGAAGCAATACGTGCTCGAGTT
CAAG
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