prot_H-canaliculatus_F_contig1204.1782.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1204.1782.1
Unique Nameprot_H-canaliculatus_F_contig1204.1782.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length147
Homology
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.110e-52
Identity = 90/146 (61.64%), Postives = 112/146 (76.71%), Query Frame = 0
Query:    1 MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLINQYDSSTFSSSSGVPNEC 146
            M DAGIA++E+   DIHDN VDG EFGIR++LG+ NNKV+DN F +I NVG FTY G+D PW+G GRP DN+FY+N I  T  G+K+KESD+ISI NN FSGT EIEFN+A D   SGNS P+ TCL +  ++STF+ SSG+P EC
Sbjct:  302 MGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 6.140e-48
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 0
Query:    1 MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLIN-------QYDSSTFSSSSGVPNE 145
            M DAGIA++ESFNADIHDN +DG +FGIRM+LG+G N VYDN FND  + G +TY G+D P + +GRP  N F +N +T++A G+K K SD+I + NNEF+GT+E+EF DAQ T  SGNS PSG C+ N           STFSSSSGVP+E
Sbjct:  312 MPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSSGVPSE 463          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.080e-31
Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    1 MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIG--DGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLIN 129
            MQDAG+A++ES NADI++N     +FGIR++LG+  N V++N F D+   G +TY G+D P  G  DGRP DN F +N I +   G+K+KE D   I +N F+GT E+EF DAQ+T+  GN+ P G C+ N
Sbjct:  367 MQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKN 497          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.330e-29
Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    1 MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLINQYDSSTFSSSSGVP 143
            MQDAGIA++ESF+A I+ N+++GA++GIRM+LG+GNN+VY N+F DI   G +TY G+D P + DGRP  N    N++ D  +G+K+KE D      N F      EF ++ +T  SGN    G C+    +    S S  +P
Sbjct:  742 MQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIP 883          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 9.440e-23
Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    7 AIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIG--DGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLINQYDSSTFSSSSGVPN 144
            A+MESF A+I+DN ++  ++GIR++LG+ +N ++DNTF+     G +TY G+D P +   DGR  DN F  N I++T V +K+KE D  S  NN F   K  EF D+ DT  + N    G CL    D ST  +S  +P+
Sbjct:  710 ALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGG-CL----DESTDFASGSIPS 844          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.690e-22
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    7 AIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCL 127
            A +ESF+ADI+DN +   ++GIR++LG+G+N + +NTF++I   G +TY G+D P + +GRP  NKF  N +++T +G+  KE D     NN F+     EF  ++DT+ +GNS   G CL
Sbjct:  544 AFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGG-CL 663          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.290e-21
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 0
Query:    3 DAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGD-GRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGN 119
            DAG+A+MESFNAD+ +N  +  ++G+RM++G  +N    N  +D      +TY G+D PW+ D GR  DN F DN IT     IKL  +D    ++N F   K + F DAQDT +SGN
Sbjct:  180 DAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGN 297          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 8.210e-20
Identity = 55/136 (40.44%), Postives = 80/136 (58.82%), Query Frame = 0
Query:    1 MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWI--GDGRPYDNKFYDNIITDTA--VGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLINQYD 132
            MQDAG+A+MES++A+I+DN      +GIR++LG+G N + +N F+ I   G +TY G+D P +   +GRP DN F  N I      +G+ +KE DS   ++N F+G    EF D+ DT    N+   G CL    D
Sbjct:  490 MQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT--GGGCLDGSTD 623          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.600e-18
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 0
Query:    3 DAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGD-GRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGN 119
            DAG+A+MESFNAD+ +N  +  ++G+R+++G  +N    N  +D      +TY G+D PW+ D GR  DN F DN IT     IKL  +D    ++N F   K   F DA+ T +SGN
Sbjct:  357 DAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGN 474          
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.130e-18
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 0
Query:   13 NADIHDNVV-DGAE--FGIRMNLGAGNNKVYDNTFNDIHNVGFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEFSGTKEIEFNDAQDTKLSGNSFPSGTCLIN-------QYDSSTFSSSSGVPNE 145
            N  I++N V DG     GI ++  + N +VY          G       D P + +GRP  N F +N IT+TA G+K+K SD+I I NN+F+GT+E+EF DAQ T  S NS PSG C+ N           STFSSSSGVP+E
Sbjct:  233 NVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG---------GXXXXXXXDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSSGVPSE 366          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1204.1782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI1.110e-5261.64Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE6.140e-4857.24MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI3.080e-3148.09Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI8.330e-2942.66Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FWE8_ECTSI9.440e-2341.43Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRN0_ECTSI1.690e-2242.15Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
Q7XAJ9_9PHAE1.290e-2143.22Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7G8D9_ECTSI8.210e-2040.44Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
Q7XAK2_9PHAE1.600e-1840.68Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D7FIU4_ECTSI2.130e-1843.36Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 3..120
e-value: 1.7E-10
score: 41.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..144
e-value: 4.1E-9
score: 37.9
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1204contigH-canaliculatus_F_contig1204:15111..16510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1204.1782.1mRNA_H-canaliculatus_F_contig1204.1782.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1204 14054..17737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1204.1782.1 ID=prot_H-canaliculatus_F_contig1204.1782.1|Name=mRNA_H-canaliculatus_F_contig1204.1782.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=147bp
MQDAGIAIMESFNADIHDNVVDGAEFGIRMNLGAGNNKVYDNTFNDIHNV
GFFTYYGADPPWIGDGRPYDNKFYDNIITDTAVGIKLKESDSISIMNNEF
SGTKEIEFNDAQDTKLSGNSFPSGTCLINQYDSSTFSSSSGVPNEC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
IPR039448Beta_helix