prot_H-canaliculatus_F_contig1202.1772.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1202.1772.1
Unique Nameprot_H-canaliculatus_F_contig1202.1772.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length576
Homology
BLAST of mRNA_H-canaliculatus_F_contig1202.1772.1 vs. uniprot
Match: D7FR62_ECTSI (Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR62_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.150e-37
Identity = 147/337 (43.62%), Postives = 173/337 (51.34%), Query Frame = 0
Query:    1 MQEKCNLTVPPALEAPPSVTRVESTSLQVAFLPLRFEAGGSGHRLPVARYKVKVERDGDASGGT---PDPAVGRPANGTDTGSXXXXXXXXXXXXXXXXXXAAETTSPNDNQADSSGAFASPTLAVIVLVP--GPTPGAKEARPHQRILVRVGGLEPAVRYRVKVAAVNAVGFGPYGPASPVVVTLEKVEEDAGFEGSSEKKTINSTTTEEESRVKKGKGRQVLAMERRRRMAAQAARLQEQQQREAEERNARLEQTRGQR-----SSGQVSSRRLYATPESSN--GGHNDRKGKGRDGASGCDDLTESTDHPYQPDRQRHDPRSRRRHYSVASAAR 325
            MQEK    VPPA E PP+VTRVE TSLQVA+LP   EA G   +LPV RYKVKVE  G++S      PD A            XXX                A   +  D   D S +FA+PTL+ +VLVP  G T  A E    +R LV V GL PA RYRVKVAA+NA+GFGPYGP S  VV  EK+E +         +   S+   E  R KKGKGRQVLA E+RR MAAQA RLQEQQ  EA                   S+ +VS R+  A     +  G HN   G G DG      LTES+D P+      H  RS+ +H     AAR
Sbjct:  133 MQEKGGFEVPPAPEVPPTVTRVEPTSLQVAYLPFP-EASG---QLPVTRYKVKVEHPGESSNQAAQAPDIAXXXXXXXXXXXXXXXNIPLDVDGVEGAENARAPPAADPDAGGDDS-SFANPTLSKVVLVPSAGETNSASEGGRQKRTLVAVRGLRPATRYRVKVAAINALGFGPYGPPSDAVVLPEKIEGEXXXXXXXXTRENGSSVGAE--RAKKGKGRQVLAREKRRSMAAQAVRLQEQQLLEAXXXXXXXXXXXXXXXPQGSSTAKVSGRQRLAATVGGDYCGRHNGGVGAGGDGREPL--LTESSDVPHH-----HRSRSQPKHGGAGLAAR 455          
BLAST of mRNA_H-canaliculatus_F_contig1202.1772.1 vs. uniprot
Match: A0A6H5KBJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.160e-31
Identity = 122/287 (42.51%), Postives = 144/287 (50.17%), Query Frame = 0
Query:    1 MQEKCNLTVPPALEAPPSVTRVESTSLQ---------------------------------VAFLPLRFEAGGSGHRLPVARYKVKVERDGDASGGTPD-PAVGRPANGTD---TGSXXXXXXXXXXXXXXXXXXAAETTSPNDNQADSSGAFASPTLAVIVLVP--GPTPGAKEARPHQRILVRVGGLEPAVRYRVKVAAVNAVGFGPYGPASPVVVTLEKVEEDAGFEGSSEKKTINSTTTEEESRVKKGKGRQVLAMERRRRMAAQAARLQEQQQREAEERNAR 248
            MQEK    VPPA E PP+VTRVES SLQ                                 VA+LP   EA G   +LPV  YKVKVE   D+S      P +   AN  +   T S                  A+    P+    DSS  FA+PTL+ +VLVP  G T  A E    +R LV V GL PA RYRVKVAA+NA+GFGPYGP S  VV  E+ E        +  +   S+   E  R KKGKGRQVLA E+RR MAAQAARL++QQ  EA+ER  R
Sbjct:  261 MQEKGGFEVPPAPEVPPTVTRVESASLQAVQRAPQPTASARDRPLFLLLHTFFPSSTNRSKVAYLPFP-EASG---QLPVTHYKVKVEHPADSSNQAAQAPDITEAANTYNVHNTTSTSNIPLNVDGTEGAGNARASPAADPDAGGDDSS--FANPTLSKVVLVPSVGDTNSASEGGRQKRTLVTVRGLRPATRYRVKVAAINALGFGPYGPPSEAVVLPEETEGXXXXXXXTTTRENGSSVGAE--RAKKGKGRQVLAREKRRSMAAQAARLEKQQLLEAKERQQR 539          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1202.1772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR62_ECTSI1.150e-3743.62Chain D, Drug Export Pathway Of Multidrug Exporter... [more]
A0A6H5KBJ1_9PHAE1.160e-3142.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..255
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 10..169
e-value: 1.7E-6
score: 37.5
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 10..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1202contigH-canaliculatus_F_contig1202:7989..11476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1202.1772.1mRNA_H-canaliculatus_F_contig1202.1772.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1202 6589..11691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1202.1772.1 ID=prot_H-canaliculatus_F_contig1202.1772.1|Name=mRNA_H-canaliculatus_F_contig1202.1772.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=576bp
MQEKCNLTVPPALEAPPSVTRVESTSLQVAFLPLRFEAGGSGHRLPVARY
KVKVERDGDASGGTPDPAVGRPANGTDTGSGDNTHDGNGNAAAAAKREAA
ETTSPNDNQADSSGAFASPTLAVIVLVPGPTPGAKEARPHQRILVRVGGL
EPAVRYRVKVAAVNAVGFGPYGPASPVVVTLEKVEEDAGFEGSSEKKTIN
STTTEEESRVKKGKGRQVLAMERRRRMAAQAARLQEQQQREAEERNARLE
QTRGQRSSGQVSSRRLYATPESSNGGHNDRKGKGRDGASGCDDLTESTDH
PYQPDRQRHDPRSRRRHYSVASAARGTSTIRTPQQRTAPSPSSAAPAPAT
RRDWARHHEQQRQKSARKGGRPATTGASNEQKRGHADEEGDGGVGDKNTS
ARSGLRRLVATAPESVAAAEPRYLAATTAGRMSARAYRNLNDEQASYDNT
ENRRISTSTSICKAHGKEGLFRGRSSLLPAAHDESKSKPCATVLRPRRLS
SKEGGSGGGDGGGGGKSVMSEAAGSPRQLRQRRSRSRVGGRKGDLHSQSD
VSVSSCGDMTISSEEQEGYDLAYAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf
IPR003961FN3_dom