prot_H-canaliculatus_F_contig12001.1761.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12001.1761.1
Unique Nameprot_H-canaliculatus_F_contig12001.1761.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length223
Homology
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 2.770e-96
Identity = 161/223 (72.20%), Postives = 180/223 (80.72%), Query Frame = 0
Query:    1 RINDGLVEKANAHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFWVTLNAARTVTALLGGSADEVQETPGPVQASGVAGGGVGPLEVDGGDKTKPFVQSAVTVQDTEDGSGAAARRAAPAAAPDGAAPSGGSDGGL 223
            RINDGLVEKA+ HGD+++EAKP+L  LL  SGVLY GSLCAIGAMFHYF GCAENELV+SLTLIL++ +TALQL+GGEGNLLASAVVT+YATFLCFSAVSKTPT  CNPFVGESN  V LIGI LTVLSLFWVTLNAARTVTALLGG A+EV+E PGPVQA G  GGG          KT+PFVQ AVT QD + G+GA+ R A PA+A  G   +  SDGGL
Sbjct:  178 RINDGLVEKASEHGDDSEEAKPYLCALLTASGVLYTGSLCAIGAMFHYFQGCAENELVMSLTLILAVAITALQLLGGEGNLLASAVVTSYATFLCFSAVSKTPTSSCNPFVGESNTTVVLIGIALTVLSLFWVTLNAARTVTALLGGQANEVEEAPGPVQAPGGDGGGXXXXXXXX--KTRPFVQGAVTAQDQDVGAGASPRPATPASA--GTPSAAQSDGGL 396          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.870e-33
Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 0
Query:    3 NDGLVEKANAHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGES-NIGVTLIGIGLTVLSLFWVTLNAARTVTALLGGSA 149
            ND  V+KA   G++  E +  L  L+  S +L+A ++  +G +F YF GC  N++++SLTLI+ + +T LQL G EGNLL SA+V+ Y TFL FSAVSK P   CNPF+G S N+   ++G+ LT LSL W+  ++  ++T LLGG A
Sbjct:  178 NDACVKKAQDLGED-GEGRKVLVALVCTSLLLFAVAISGVGVLFGYFKGCQSNDIILSLTLIMIVAMTVLQLSGPEGNLLTSALVSVYMTFLGFSAVSKNPDASCNPFIGSSQNLTSIIVGLVLTFLSLLWICASSGTSITKLLGGEA 324          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.260e-29
Identity = 61/132 (46.21%), Postives = 91/132 (68.94%), Query Frame = 0
Query:    3 NDGLVEKAN-AHGDE-TDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFW 132
            N+  VEKA+ A  +E  D+ K +LA +L    + Y GS+  I  M+ YF GCA NE  +S+TL +S+ VTA+QL G E +LL SA++ AY+T+LC++AVS+ P ++CNP +G+ +I   ++GIGL +LSL W
Sbjct:  198 NESWVEKADKAELEEGVDQGKKWLAAILVSCAIFYIGSIVVISLMYVYFSGCASNEAFISVTLAMSVIVTAVQLSGEESSLLTSAIIVAYSTYLCYTAVSRNPNDECNPQLGDEDILGIVLGIGLCLLSLTW 329          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7R9WZ09_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ09_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.630e-27
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    3 NDGLVEKAN-AHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSL 130
            ND  VE++N A  +E    + +L  ++  + +++  S    G M HYF GC +N   +++T++L + +T  QL GGEG+LLAS+++T YAT LC+SAVSK P  DCNPF+GE +     IG+G TV++L
Sbjct:  252 NDSWVERSNKAEAEEVGSGRNWLIAIVVSAAMMFITSFVGWGLMIHYFAGCPDNNAFIAITIVLCVIITGAQLSGGEGSLLASSLITLYATSLCYSAVSKNPDRDCNPFLGEDDFLGIFIGVGFTVVAL 380          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7R9WUP5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WUP5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.380e-26
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    3 NDGLVEKAN-AHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFW 132
            ND  VE+AN A      E   +L  ++A     Y+ ++  IG ++ +FD C EN  V++LTL+  I +TALQL G EG+LL S+V++ YAT+LCFS VSK P   CNP +G +++   +IG+ LTVLSL W
Sbjct:   20 NDDWVERANEADRISFGEGSGWLQAVIATCVACYSAAIIMIGFLYKWFDDCPENTWVITLTLLGIIAMTALQLSGTEGSLLTSSVISLYATYLCFSIVSKNPNGTCNPRLGHNDVWGIIIGLFLTVLSLIW 150          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A1E7F563_9STRA (Serinc-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F563_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.150e-26
Identity = 60/152 (39.47%), Postives = 100/152 (65.79%), Query Frame = 0
Query:    3 NDGLVEKAN-AHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVG-ESNIGVTLIGIGLTVLSLFWVTLNAARTVTALLGGSADEV 152
            NDG V+++  A  +E+   + +L  ++  +  L+  S+     +F++F GCA N   +SLT+ILS+ VT  QL G EG+LLAS+++TAYAT LC++AV++ P  DCNP +G + N+ + +IG+GLT++SL +V    + T  + LGG  +++
Sbjct:  187 NDGWVDRSEKADAEESGSGQKWLIAIVISAAFLFLVSIVGWVLLFYFFSGCATNTAFISLTIILSLLVTGTQLSGSEGSLLASSLITAYATMLCYNAVTRNPNSDCNPQLGGDDNLSI-IIGLGLTIVSLSYV--GWSTTADSALGGENNDI 335          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7S3QC27_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC27_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.900e-25
Identity = 60/155 (38.71%), Postives = 93/155 (60.00%), Query Frame = 0
Query:    2 INDGLVEKAN-AHGDETDEA-KPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFWVTLNAARTVTALLGGSADEVQE 154
            +N+  V K + A  DE + A K +   LLA   +LY  S  AIG M+++F GC  N   +++TLI+ I  T +QL G E +L ASA + AY+TFL ++AVSK P ++CNP +GE N+   ++G+GLT++ + W     ++T    +G   D V +
Sbjct:  200 VNESWVAKGDQAELDEGEGAGKKWFGALLATCALLYLASFVAIGLMYYFFSGCGTNTAFITITLIVGIVSTGIQLTGEEASLFASAAIFAYSTFLLYTAVSKNPNDECNPQLGEENVLGIVLGVGLTMIGVLWT--GYSKTAYRAVGEEDDAVND 352          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7S4AMX4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMX4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.580e-25
Identity = 57/141 (40.43%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    3 NDGLVEKAN-AHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFWVTLNAARTVT 142
            NDG VE++N A  +E    K +L  +L  +  L   S+   G +F++F GC  N   +++T+ILS+ V   QL G EG+LLAS+++TAYAT LC+SAV++ P   CNP +   ++    IG GLT++SL +V  +A    T
Sbjct:  187 NDGWVERSNDAENEENGSGKKWLIAILVSAAFLLLASIVGWGLLFYFFGGCGTNIAFIAITIILSLSVIVAQLSGNEGSLLASSLITAYATMLCYSAVARNPNAACNPQLNTDDVLSICIGAGLTIVSLGYVGWSATADST 327          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7S2PAW5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAW5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.890e-25
Identity = 56/145 (38.62%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    3 NDGLVEKANAHGDETD--EAKPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFWV--TLNAARTVTA 143
            ND  V  AN    E        +LA +L ++ + +  S+ +IG M+HY+ GC  NE  +S+TLI+ + +T +QL G +G+LL SA+++AYA +L F+++SK P  DCNP +GE+N    +IG+G T++SL W   +L A + +++
Sbjct:  201 NDAWVINANTADRENGVGAGNKWLAAILGMAVLTFIFSITSIGLMYHYYGGCDINEAFISITLIMIVAITGVQLSGEDGSLLTSAIISAYAAYLAFTSMSKNPDGDCNPRLGENNALGIVIGVGFTLISLTWAGFSLTAEKRLSS 345          
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Match: A0A7S4QFA3_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFA3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.070e-24
Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 0
Query:    3 NDGLVEKANAHGDETDEA------KPFLAVLLAISGVLYAGSLCAIGAMFHYFDGCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVSKTPTEDCNPFVGESNIGVTLIGIGLTVLSLFW 132
            N+  VEK+N    E D        K +L  ++A+  + Y  S   +G M+H++ GCA N  ++S+TL+  I VTA+QL G EG+LL S++++ YAT+L FSA+SK P   CNP +G +++G  ++G+ LT +SL W
Sbjct:  259 NESWVEKSN----ECDRVEFYGAGKKWLRAIIAMCALFYIMSFTGVGLMYHFYLGCALNNAIISITLVGIIAVTAIQLTGTEGSLLTSSILSLYATYLAFSAISKNPDATCNPHLGSNDVGGIILGLLLTFMSLAW 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12001.1761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C2_ECTSI2.770e-9672.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA1.870e-3345.95Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A7S2I2C9_9STRA6.260e-2946.21Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9WZ09_9STRA3.630e-2742.64Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7R9WUP5_9STRA3.380e-2645.04Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1E7F563_9STRA7.150e-2639.47Serinc-domain-containing protein n=1 Tax=Fragilari... [more]
A0A7S3QC27_9STRA1.900e-2538.71Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S4AMX4_9STRA3.580e-2540.43Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2PAW5_9STRA3.890e-2538.62Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4QFA3_9STRA2.070e-2440.44Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 3..153
e-value: 1.4E-27
score: 96.7
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 9..145
IPR029559Membrane protein Tms1-likePANTHERPTHR10383:SF9SERINE INCORPORATOR 3coord: 9..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 57..76
NoneNo IPR availableTMHMMTMhelixcoord: 81..100
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12001contigH-canaliculatus_F_contig12001:306..3297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12001.1761.1mRNA_H-canaliculatus_F_contig12001.1761.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12001 306..3297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12001.1761.1 ID=prot_H-canaliculatus_F_contig12001.1761.1|Name=mRNA_H-canaliculatus_F_contig12001.1761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=223bp
RINDGLVEKANAHGDETDEAKPFLAVLLAISGVLYAGSLCAIGAMFHYFD
GCAENELVVSLTLILSIGVTALQLMGGEGNLLASAVVTAYATFLCFSAVS
KTPTEDCNPFVGESNIGVTLIGIGLTVLSLFWVTLNAARTVTALLGGSAD
EVQETPGPVQASGVAGGGVGPLEVDGGDKTKPFVQSAVTVQDTEDGSGAA
ARRAAPAAAPDGAAPSGGSDGGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029559Tms1-like
IPR005016TDE1/TMS