prot_H-canaliculatus_F_contig1200.1756.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1200.1756.1
Unique Nameprot_H-canaliculatus_F_contig1200.1756.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length106
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1200.1756.1 vs. uniprot
Match: A0A6H5L2H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H7_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 5.790e-11
Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:    1 MKKRLKDAKMLKRKMMGEHSGSIS--DKKKVKKKIKKLSTKTKSMKMD----ASSWRVHGSGGDSSDSCS 64
            +K  LKDAK LK K+M E  GS S  +KKKVK KIKKLSTKTKSM +D    +SSWR+H SGG+SSD CS
Sbjct:   10 LKXTLKDAKALK-KIMDESVGSTSSPEKKKVKXKIKKLSTKTKSMNLDGHAGSSSWRIHDSGGESSDPCS 78
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1200.1756.1 vs. uniprot
Match: D8LJ38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ38_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.540e-8
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:   29 VKKKIKKLSTKTKSMKMD----ASSWRVHGSGGDSSDSCS 64
            VKKKIKKLSTKTKSMK+D    +SSWR+HGSGG+SSDSCS
Sbjct:   53 VKKKIKKLSTKTKSMKLDGHASSSSWRIHGSGGESSDSCS 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1200.1756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2H7_9PHAE5.790e-1164.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ38_ECTSI1.540e-880.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1200contigH-canaliculatus_F_contig1200:1947..2847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1200.1756.1mRNA_H-canaliculatus_F_contig1200.1756.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1200 1931..3178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1200.1756.1 ID=prot_H-canaliculatus_F_contig1200.1756.1|Name=mRNA_H-canaliculatus_F_contig1200.1756.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=106bp
MKKRLKDAKMLKRKMMGEHSGSISDKKKVKKKIKKLSTKTKSMKMDASSW
RVHGSGGDSSDSCSSQSSDSDWGGSDWGSDSSSECGSDSGGSDSGGGDSD
GGGSD*
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