mRNA_H-canaliculatus_F_contig12.1750.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12.1750.1 vs. uniprot
Match: D7FVI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI6_ECTSI) HSP 1 Score: 661 bits (1706), Expect = 2.640e-210 Identity = 566/1441 (39.28%), Postives = 730/1441 (50.66%), Query Frame = 1
Query: 16 QIQRARMIEGKRPLENLPHVEEPMTGIRPVTTVRRRPAEAMPFPIRWEEEGKMTPGDILVTVEHCTACARHRMSLHHNADAYIQRAAAVQGAVGRALSGAGRPPSASGRDAGQTTLKQS---SPNTSVLTKAVTERSASGGVGRVGAFEVQVTACLLAEQAQEGRSNVRLRLRTIQSPAPSTCKGV--VRSLTVSSKLSSGKWPSPDGVARKVVEILHDWGALRQPQLNPESDSRSACRDAPSTRGREESSMGVKECTAAAAHGMHVAGAQNRYLGKDSADLYQTDY-----QSEKPSDKPSTAAPSG----LVQLGMLNENTAVPSTAAGA----SQEGEQQAGTGM--SRDGLMGGVVVGRGAA---SPATSSVYVALLQGDDIINAAGELATGTAG---------VVPGTPATVPSVFALSVENAFAEGVEFAAEGSTADPCFLVKMGSHNSKKSDPVPDVRGGSGGECRWSSEVCSVAGLREVDLRSSGLEVEIWDDLGWIIAKGKMLPEDVRPVLEAGLASLPRAAAPTPCHSAAVTTTP-----TLVCALKSERSTANCPIGRVTFEIRI--------------SASDGAQSQPGRQENAIAPALLGSTEQDDESPALSSPGNTRNVRGESSHRAGLDVFRAKS-----RACAGRMIDEVDDLLRSSPRSNVSRSSMSSAGSKXXSTGDGSGGNCDSGGADELSGALGG-VFTMSRATTVDDPMEESWSSVESAGKESGPLVSSARNMARDVNIALVSAAGTAEEAEGLR-SDEEAFPFTAPERQAVSASTSTVVYE---ASGSSTTYSSYEEDDGGRYDEEVFDDGDDRGEQASAE-TFRFRKIFSFSSASSASSCFESLCPNAGPRESRDDG-EAAETRRVQQHARGEMVVXXXXXXXXXXXXXXXXXXXRASGGADKKEGVKHLFERLDKDQDGQLTAEDLENAF-PMNDRIVGLEQKGESILPRATVMAALVAGIDRVGKRSANAPEFESFILDYP-DGPQPKTAAAAEPEEGISLTPPMRVGVEMAALWLRLRRAALTQGMLHQPHSSGDNPTLLAAIAGK-------GARETCMRPKEGAKGVAGGACGASELDGVVDLSRMGMASFESGDPRDSGSVSESVFRDVIGGPGLRIEPSLNESEISALSSHFDSNFS------------DRAQRHGGRVEKGTTTRGS---LDLGAMISYRALMAWIDPVDVGRIAKRVSRFLRAVGDPSSKFGALLALRAAAGQEDRGQYSAAVAPSTLSRA-AATAQLVAGEKSCVGAVDNSSAMMDIPAAMKGDSIGLRDGADSIDDAPASVALATTPAAVGSAAASSDRSGGDRQNGRNGELGIDRGAIANLFRAVDTDGSGLISPEELLKAVNGLGLPVSAAEARLLVSEYGRTAGGCQGEGNIER---EGQLSLGDFDSMLRPQT 4065
QIQR R++EGK PL+ LP V EP TG+RPVT V+RR + MP P+RW EE M GD+LVTVEHC AC+RHRMSLHHNADAYI+RAAA++ + +AL GAGR P+A G+ G QS S TSV+TK TE SASGGVGRVGAFEVQVTACLL+ QA S V R ++ +P G +RS TVSSKL+SGKWP P+ VARK+V+ L WGAL Q + C SSM + H + +G NR LG + T + +++P++ T A SG L ++ E GA S GE + G G + DG G + G G +P ++ V L Q + N+ E + G T A F L VE+A AEGVEFAAEG+TADPC L+++G +KS PV DV GG GG+CRW S+ C V LRE ++RSSGLEVEIWDDLGW+IAKG + PE++ L LA+ RAA T + P T+ C LKS+R N GRVTF IR+ A+DGA S + L + + L T V+G+++ S R AGR+ DE++DLL + + S S +S++ S TG G+G + D S LGG + T+VDD + ESWSSVE GPL +SA++ R+ LV A + + SD P +R V + V A+ T S DG D+ DD D G E R +FS SSASS++S SL E + G +AE R QH R E+ V GG + LF RLD+DQ+GQL E+LE A P + E+ +LP + VMAALVAG+DRVGK+SAN EF++++LD P G T A PE R V+MAALWLRLRRAA+ H + + + AG GA + + P E A +G VD+S +G FE D SGSV FR+V+ GPG++IEP L+E+E+ +L HFDSNF + A GR E+ TR + + A +SYRAL+AWIDP+DVGR+AKRVSRFLRAVG+P SK G +A + G D+G T+ RA A T V G KS GA + A D+P A++ +GL G + A AS A G ++R AI LFRAVD D SG IS EELLKAVNGLGLPVS AEARLLV+EYG AGG + +G+ + EGQLSL DFD M+R Q+
Sbjct: 45 QIQRTRLMEGKEPLDGLPDVREPETGVRPVTVVQRRCIQGMPPPLRWSEEKHMVAGDVLVTVEHCAACSRHRMSLHHNADAYIRRAAAMKTSAEQALIGAGRHPTAGGQGRGPGAGAQSMRLSQTTSVVTKPTTEASASGGVGRVGAFEVQVTACLLSRQAPHAVSAVP-RSGQVRQTSPDVIAGAGHIRSATVSSKLASGKWPHPERVARKIVQTLQQWGALVPQQQEQQRAPVPRC-----------SSMSGTD------HPSNASGGNNR-LGNGESHASATGHVAQEPDTQEPNEGEETRASSGENGALTRVVASTERVQDKRHGNGAELSSSDGGEMKGGAGELGASDGWSEGGIAGAGRRMLENPDATTNRV-LSQAQGVRNSTSEGSASGIGSTARPHGGDTATSTVAPTLEAFDLIVEDACAEGVEFAAEGNTADPCLLLRVGKRKGRKSKPVADVPGGPGGQCRWPSQTCLVTSLREENIRSSGLEVEIWDDLGWVIAKGNVTPEEIGDALGVALAAA-RAAPATAVSGTEGSVPPPPPLPTVTCDLKSDRGPVNTSNGRVTFGIRLLRPETASFASRYGERATDGAASYNAEAGDDTKERLSQTVQNMKNGEVLRRVDTTTPVQGDTAEAQHASNATNSSGTKAVRGDAGRVFDEINDLLGLTSNGSASGSGISTSCSAASPTGGGTGSSGD------FSFVLGGGLLGSEHHTSVDDLVGESWSSVEE-----GPLATSAQSR-RESGGGLVGRARKLTPSPAISISDNGGAPV---DRNGVGGGVNRPVPPLTLAANEGGTADSSNPSDGVDADDYSDDDFDCDGASGGTEGPLDVRSLFSCSSASSSASL--SL-------EKEEHGLTSAEARGAPQHEREEIAVRAAARILRRRLRRAA----ERCGGGNLCAKAALLFNRLDEDQNGQLAVEELEKALAPTTGKRA--ERTESPVLPPSRVMAALVAGMDRVGKQSANLKEFQAYVLDLPGSGENTATDAPTSPELS-------RGNVDMAALWLRLRRAAIESSSRHDCNEDRVQRPIPESAAGTNGCGGEGGAEDQEVMPGERES------WSALTWEGPVDVSSLGRERFEECDTEGSGSVRCHTFREVLSGPGVQIEPPLSEAEMESLCRHFDSNFKSNRLPVGRDWCGEAASNPAGREEENEETRAAGWPTNADAPVSYRALLAWIDPIDVGRVAKRVSRFLRAVGNPGSKIGGPVAEQ---GGRDQG---------TIVRALAVTGSEVGGAKSG-GARNKVGAAADMPKAVEVTGVGLGGGTGATR-AAASDAHGXXXXXXXXXXXXXXXVSXXXXXXXXGVETVERRAIVKLFRAVDVDASGHISQEELLKAVNGLGLPVSVAEARLLVTEYGGVAGGGRADGSGGKGTGEGQLSLDDFDCMVRWQS 1407
BLAST of mRNA_H-canaliculatus_F_contig12.1750.1 vs. uniprot
Match: A0A6H5K0F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F6_9PHAE) HSP 1 Score: 472 bits (1215), Expect = 6.040e-141 Identity = 466/1308 (35.63%), Postives = 621/1308 (47.48%), Query Frame = 1
Query: 460 VTACLLAEQAQEGRSNVRLRLRTIQSPAPSTCKGV--VRSLTVSSKLSSGKWPSPDGVARKVVEILHDWGALRQPQLNPESDSRSACRDAPSTRGREESSMGVKECTAAAAHGMHVAGAQNRYLGKDSADLYQTDY-----QSEKPSDKPSTAAPSGLVQLGMLNENTAVPST--------AAGASQEGEQQAG----TGMSRDGLMGGVVVGRGAA---SPATSSVYVALLQGDDIINAAGEL---ATGTAGVVPG------TPATVPSVFALSVENAFAE--------------GVEFAAEGSTADPCFLVKMGSHNSKKSDPVPDVRGGSGGECRWSSEVCSVAGLREVDLRSSGLEVEIWDDLGWIIAKGKMLPEDVRPVLEAGLASLPRAAAPTPCHSAAV------TTTPTLVCALKSERSTANCPIGRVTFEIRI--------------SASDGAQSQPGRQENAIAPALLGSTEQDDESPALSSPGNTRNVRGES------SHRAGLDVFRAKSRACAGRMIDEVDDLLRSSPRSNVSRSSMSSAGSKXXSTGDGSGGNCDSGGADELSGALG-GVFTMSRATTVDDPMEESWSSVESAG---------KESGPLVSSARNMARDVNIALVSAAGTAEEAEGLRS--DEEAFPFT--APERQAVSASTSTVVYEASGSSTTYSSYEEDDGGRYDEEVFDDGDDRGEQASAETFRFRKIFSFSSASSASSCFESLCPNAGPRESRDDGEAAETRRVQQHARGEMVVXXXXXXXXXXXXXXXXXXXRASGGADKKEGVKHLFERLDKDQDGQLTAEDLENAFPMNDRIVGLEQKGESILPRATVMAALVAGIDRVGKRSANAPEFESFILDYP-DGPQPKTAAAAEPEEGISLTPPMRVGVEMAALWLRLRRAALTQGMLHQPHSSGDNPTLLAAIAGK--GARETCMRPKEGAKGVAGGACGASELDGVVDLSRMGMASFESGDPRDSGSVSESVFRDVIGGPGLRIEPSLNESEISALSSHFDSNFSDRAQRHG------------GRVEKGTTTRG---SLDLGAMISYRALMAWIDPVDVGRIAKRVSRFLRAVGDPSSKFGALLALRAAAGQEDRGQYSAAVAPSTLSRAAATAQLVAGEKSCVGAVDNSSAMMDIPAAMKGDSIGLRDGADSIDDAPASVALATTPAAVGSAAASSDRSGGDRQNGRNGELGIDRGAIANLFRAVDTDGSGLISPEELLKAVNGLGLPVSAAEARLLVSEYGRTAGGCQGEGNIER---EGQLSLGDFDSMLRPQT 4065
VTACLL+ QA + S V R ++ +P G +RS TVSSKL+SGKWP P+ VAR++V+ L WGAL Q + C S MG + H +++G +NR LGK + T + +++PS+ T A SG + G L AV A +S +GE G G+S DG G V G G SP ++ + L QG + N+ E+ TG+A G T A F LSVE+A+AE GVEFAAEGSTADPC L+++G +KS PV DV GG GG+CRW S+ C V GL E ++RSSGLEVEIWDDLGWIIAKG + P+++ L+ + + AAP SA T PT+ C LK++R GRVTF +R+ A+DGA S + + L + + ++ L T +V+G++ S+ L V +A R AGR+ DE++DLL + + S + ++ S STG G+GG+ D S LG G+ T+VDD ESWSSVE + G LV RN+ +++ + G+ + A P T A ER +S + +A Y +DD + DG G + + R +FS SSASS++S SL A S AE R QH R E+ V R GG + LF RLD+DQ+GQL E+LE A R E+ +LP + VMAALVAG+DRVGK+SAN EF++F+LD P G T A PE R V+MAALWLRLRRAA+ H + G + + AG G E +E G + A +G VD+S +G FE D SG V FR+V+ GPG++IEP L+E+E+ +L HFDSNF + G GR E+ TR + A +SYRAL+ WIDP+DVGR+AKRVSRFLRAVG+P SK G +A Q+ R Q A A + V G K GA +A D+P A++ +GL G E ++R AI LFRAVD D SG IS EELLKAVNGLGLPVS AEARLLV+EY AGG + +G+ + EGQLSL DFD M+R Q+
Sbjct: 26 VTACLLSRQAPQAVSAVP-RSGQVRQISPDVIAGASHIRSATVSSKLASGKWPHPEHVARRIVQTLQQWGALEPQQQEQQRAPLQRC-----------SGMGGTD------HPSNLSGGKNR-LGKGESHASATGHVAQEPDTQEPSEGDDTRASSG--ENGALGTTKAVERVHDERHGNGAEHSSSDGEGMKGGAGELGVS-DGRSEGGVAGAGRTLLESPDMTASNI-LPQGQGVNNSTSEVPVSGTGSAARPHGGETATSTVAPTMEAFDLSVEDAWAETITASWLSSLVVLKGVEFAAEGSTADPCLLLRVGKRKGRKSKPVADVPGGPGGQCRWPSQTCVVTGLGEENIRSSGLEVEIWDDLGWIIAKGNVSPDEIGNALDVAVTAA--RAAPATAVSATEGSVSPSTPLPTVTCDLKTDRGPVTTGNGRVTFGVRLLRPENASVDSRHGECATDGAVSYNAEEGDDAKERLSQTLQNMEDGKVLRRVDTTTHVQGDTTEAQHASNATNLTVKKAV-RGDAGRVFDEINDLLGLTSNGSAIGSGVPTSCSGAASTGSGTGGSGD------FSFNLGDGLLGNEHHTSVDDLAGESWSSVEEGPLATSGQCRRESGGGLVERPRNLTASPAVSISDNGRAPLDRNGVGGGVNPPAAPLTLAANERGTADSSNPSDGVDADD-------YSDDD-------FYYDGAIGGAEGPLDV---RSLFSCSSASSSASL--SLEKEAHGLTS------AEARGAPQHEREEIAVGAAAQILRRRLRRAAE---RCGGGGNLGAKAALLFNRLDEDQNGQLGVEELEKALAPT-RGKRAERTENPVLPPSRVMAALVAGMDRVGKQSANLKEFQAFVLDVPGSGGNTATDAPTSPELS-------RGNVDMAALWLRLRRAAIEPSSRHDCNKDGVQRPIPVSAAGTNGGGGEGRAEDQESMPGERE-SWSALTWEGPVDVSSLGRERFEERDTEGSGRVPCHTFREVLSGPGVQIEPPLSEAEMESLCRHFDSNFKSKRLPVGRDWNGEAVRYPAGREEENEETREVGWPVHADAPVSYRALLGWIDPIDVGRVAKRVSRFLRAVGNPGSKIGGPVAE-----QDCRDQGMPARALGVMG------PKVGGAKPG-GARIKVAASADMPKAVEVAGVGLGGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVET-VERRAIVKLFRAVDVDASGHISQEELLKAVNGLGLPVSEAEARLLVTEYAGVAGGGRADGSGGKGTGEGQLSLDDFDCMVRWQS 1251
BLAST of mRNA_H-canaliculatus_F_contig12.1750.1 vs. uniprot
Match: A0A835Z9M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.560e-8 Identity = 65/227 (28.63%), Postives = 89/227 (39.21%), Query Frame = 1
Query: 13 RQIQRARMIEGKRPLENLPHVEEPMT---------GIRPVTTVRRRPAEAMPFPIRWEEEGKMTPGDILVTVEHCTACARHRMSLHHNADAYIQRA-AAVQGAVGRALSGAGRPPSASGRDAGQTTLKQSSPNTSVLTKAVTERSASGGVGRVGAFEVQVTACLLAEQAQEGRSNVRLRLRTIQSPAPSTCKGVVRSLTVSSKLSSGKWPSPDGVARKVVEILHDWG 663
RQ+QRAR++EGKRP + LP VE+P G P R P P P W E + G+ +VTVEHC +C RH MS H+ +A+ A A + G A DA + P L S S E + R R R RT PA + ++ + SKL + +WP+P V + +WG
Sbjct: 249 RQVQRARVLEGKRPHDTLPEVEDPRPRSAAAAHAHGRPPAAGSRIAPRRVAPLP--WPEYAALARGEAVVTVEHCGSCWRHAMSFRHDPEAFAAHARTAAEEVDGLA-------------DANVSRHGHGIPPRDFLPHRAMALSTSP-----------------REALPQTRKRRRKRPRT---PAAYVPRAKPQARVLHSKLKTARWPAPAAAXXXXVAAMKEWG 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12.1750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12.1750.1 >prot_H-canaliculatus_F_contig12.1750.1 ID=prot_H-canaliculatus_F_contig12.1750.1|Name=mRNA_H-canaliculatus_F_contig12.1750.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1355bp MHLTRQIQRARMIEGKRPLENLPHVEEPMTGIRPVTTVRRRPAEAMPFPIback to top mRNA from alignment at H-canaliculatus_F_contig12:87747..96053- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12.1750.1 ID=mRNA_H-canaliculatus_F_contig12.1750.1|Name=mRNA_H-canaliculatus_F_contig12.1750.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8307bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12:87747..96053- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12:87747..96053- >mRNA_H-canaliculatus_F_contig12.1750.1 ID=mRNA_H-canaliculatus_F_contig12.1750.1|Name=mRNA_H-canaliculatus_F_contig12.1750.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=8130bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12:87747..96053- (Hapterophycus canaliculatus Oshoro5f female)back to top |