mRNA_H-canaliculatus_F_contig12.1748.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12.1748.1
Unique NamemRNA_H-canaliculatus_F_contig12.1748.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A6H5K396_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K396_9PHAE)

HSP 1 Score: 558 bits (1437), Expect = 4.180e-192
Identity = 284/362 (78.45%), Postives = 306/362 (84.53%), Query Frame = 3
Query:   96 LLGRPSRNVRVIAYGRPLHSKASTSSF-GMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGASQTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKREARLGEE 1178
            LL +PS + R +A  R LHS  S  SF G+AFDIDGVLVRG  VLPGARESLKALEDA VP+VFVTNGGGCTEE KAR+LT KLGVQV RSMV LSHSPMRALA EYSGKRVMVLGSSAK+IAEEDLGL DTVTPEEFAGEWP IFHFTG+RYY+ R+F RRL EGE PR VSAVMVLHDPLDWALEAQVVVDVL GGDPPGSGGASQTPMYISNPDF+FA+ YQEPRFAAGAFADTVRMLYAKRF   EP IEVFGKPT STFDYAR LLE+R   I          +I+R+YMVGDNPSGDIRGAN  GPPW+SNLV+TGVF+D  G GNDAEDPAHFVH+DVR+CV FAM+REAR  EE
Sbjct:    4 LLRKPS-HPRAVACARLLHSSPSKKSFFGVAFDIDGVLVRGQEVLPGARESLKALEDARVPYVFVTNGGGCTEEAKARDLTSKLGVQVHRSMVALSHSPMRALASEYSGKRVMVLGSSAKKIAEEDLGLLDTVTPEEFAGEWPDIFHFTGDRYYIPRNFPRRLAEGERPRSVSAVMVLHDPLDWALEAQVVVDVLRGGDPPGSGGASQTPMYISNPDFVFASTYQEPRFAAGAFADTVRMLYAKRFATSEPTIEVFGKPTISTFDYARRLLEERDGVIR----PQEEHKIERIYMVGDNPSGDIRGANAAGPPWLSNLVKTGVFRDKGGRGNDAEDPAHFVHNDVRECVNFAMEREARRVEE 360          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A835YU48_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU48_9STRA)

HSP 1 Score: 339 bits (869), Expect = 3.140e-106
Identity = 180/352 (51.14%), Postives = 221/352 (62.78%), Query Frame = 3
Query:  234 ARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEG--EHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGAS--QTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEV-------------------------------------FGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKREAR 1166
            A E+L+ LE   VP +F+TNGGGCTE +KA EL KK G++V R MV+LSH+PMR LA  Y+ +RV+VLGS+  QIA +DLGL++  T EE A EWP ++ F G +YY+ R+F+   G    +   PV AVMVLHDPLDWALEAQVV DVL GG PPG+G A   QTP +ISNPDF FAA Y  PRFAAGAFAD V++LY KRFG      E                                      +GKPT +TF YA  +L+ R+  +G +AG        R+YMVGDNP+GDIRGAN  G  WVSNLVRTG+F    G  ND +DPA  VHDD R CV+F ++RE R
Sbjct:   60 AAETLRKLEQLRVPLIFLTNGGGCTEAQKAAELAKKFGIKVTRDMVLLSHTPMRDLAAAYARRRVLVLGSACTQIARKDLGLQNVTTVEEVAREWPTLYPFQGPKYYIPRNFSLPPGASAPKPGAPVEAVMVLHDPLDWALEAQVVTDVLRGGSPPGAGRADGGQTPWFISNPDFTFAAQYPHPRFAAGAFADVVKLLYKKRFGADAKVTETASAILMRGCRAARAPCTHALRCRLRFRRCLRSRCRRQYGKPTLATFRYAERMLDARAKAMGLAAGPH------RIYMVGDNPAGDIRGANAAGERWVSNLVRTGLF---TGAHNDPQDPADHVHDDARQCVDFVLQREGR 402          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: D7FVJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ2_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 2.300e-95
Identity = 146/187 (78.07%), Postives = 162/187 (86.63%), Query Frame = 3
Query:  618 MVLHDPLDWALEAQVVVDVLHGGDPPGSGGASQTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKREARLGEE 1178
            MVLHDPLDWALEAQVVVDVL GGDPPGSGGASQTPMYISNPDF+FA+MYQEPRFAAGAFADTVRMLYAKRF   EP IEVFGKPT STFDYAR LLE+R   I     +  + +I+R+YMVGDNPSGDIRGAN  GPPWVSNLV+TGVF+DT   GNDA+DPAHFVHDDV++CV FA++REAR G+E
Sbjct:    1 MVLHDPLDWALEAQVVVDVLRGGDPPGSGGASQTPMYISNPDFVFASMYQEPRFAAGAFADTVRMLYAKRFATSEPTIEVFGKPTISTFDYARRLLEERDGVI---RPQQATSKIERIYMVGDNPSGDIRGANAAGPPWVSNLVKTGVFRDTGNRGNDAKDPAHFVHDDVKECVNFAIEREARGGDE 184          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A8K1CB61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB61_PYTOL)

HSP 1 Score: 258 bits (660), Expect = 3.800e-76
Identity = 144/335 (42.99%), Postives = 197/335 (58.81%), Query Frame = 3
Query:  159 ASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGG--ASQTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVR-DCVEFAMK 1154
            AS  SFG+AFDIDGVLVRG   LP AR+ L +L +  VP +F+TNGGGC EEEKA+ L + L +++D   ++LSH+PMR L  +Y   RV+++GS        + G    V+ +E A   P  + F   +Y  K           H  P+ A++++HDP+DWA E Q+ VDVL GGDPPGSG    +QTP+++SN DF+F+  Y  PRFA GAF   +++LY    GK E  +  +GKP   T+ YA GLL          A  SPS ++  +Y +GDNP  DI+GAN  G  W S LVRTG++  T       +DP H  H DV  +CV  A++
Sbjct:   30 ASEPSFGIAFDIDGVLVRGGKELPRARQVLLSLRENNVPHIFLTNGGGCMEEEKAKNLGRALDLEIDPKQMILSHTPMRELVEKYKDARVLIMGSYDVYTVAREYGFSKVVSVKELAHHHPTQYPFN--KYDHKH-------APHHEEPIEAIIIMHDPIDWAPELQIAVDVLIGGDPPGSGRPCGTQTPLFVSNDDFVFSGAYPHPRFAQGAFTRCLKLLYETHTGK-ELEVTRYGKPHNVTYSYAEGLLNNL-------ARRSPSNRLKNIYGIGDNPLADIQGANNAGAHWSSVLVRTGIYDGT-------KDPEH--HPDVHAECVFGAIQ 338          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A0G4F8D8_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F8D8_VITBC)

HSP 1 Score: 255 bits (651), Expect = 9.930e-75
Identity = 142/327 (43.43%), Postives = 190/327 (58.10%), Query Frame = 3
Query:  180 MAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGASQTP-MYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKR 1157
            + FDIDGVLVRG   L GA+E+LK L D  +PF F+TNGGG TE  KA ELT  L  +V    V +SH+PMR +A  Y+ +RVMV+GS       +  G  D +TP++F  EWP ++ +       ++  TR  G    P P  AV++LHDP DWALEAQV+ D+L G     + G   +P +Y SNPDF+++A +  PRF  GAF   +  L+ K  G+  P +  +GKP    + YA  +LE     I  S   + +   DR+Y +GDNP  D+RGAN  G PW S LVRTGVF    G  ND +DPAH V  DV   V+  ++R
Sbjct:   41 VVFDIDGVLVRGKKALQGAKEALKLLRDGDLPFTFLTNGGGITESNKAEELTTLLDTEVSPDQVQMSHTPMREVAQRYTDRRVMVVGSKRFLDVAKSCGFSDIITPQDFLQEWPNLYPY-------RKVETRPKG----PLP-EAVVILHDPQDWALEAQVLCDILSGSL---AAGEEHSPHLYASNPDFLYSAAHHTPRFGQGAFTTALEHLFEKLHGRPLP-VTYYGKPNAVVYRYATRILEAEVRRIR-SLPAADNVTFDRIYAIGDNPKADVRGANRAGLPWTSVLVRTGVFS---GEDNDPDDPAHIVSHDVHAAVKMIVER 347          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A3F2RHX1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHX1_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.010e-74
Identity = 147/362 (40.61%), Postives = 207/362 (57.18%), Query Frame = 3
Query:   87 LRQLLGRPSRNVRVIAYGRPLHSKASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGAS--QTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEV--FGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKRE 1160
            LR L  R +R++  ++   P H   ST SFG+AFDIDGVL+RG   LP AR  L++L   GVP +F+TNGGGC EE+KA+ L+  LGV ++   ++LSH+PMR ++  Y   RV+++GS       ++ G +  V+ ++     P  + F   RY  K           H  P+ A++V+HDP+DWA E QV VDVL GGDPPGSG  S  QTP+++SN DF+F+  Y  PRFA GAF   +++LY    G+    +EV  +GKP   T++YA GLL   S   G          +  +Y +GDNP  DI+GAN  G  W S LVR+G++     G N+ E       D V + ++   KRE
Sbjct:    7 LRSLSARCTRSLSSVS--APSHG-LSTPSFGIAFDIDGVLIRGGHELPKARRVLESLRANGVPHIFLTNGGGCMEEDKAQNLSDVLGVPINPEHMILSHTPMREISKTYGDSRVLIMGSRDVWNVAKNYGFKKVVSVKDLVRHNPTEYPFL--RYEQKL-------APHHEEPIEAIIVMHDPIDWAPEIQVAVDVLIGGDPPGSGNPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYEDFTGR---TLEVTNYGKPHNVTYNYAEGLLNTISGRAG---------PLQHIYGIGDNPMSDIQGANNAGDGWTSVLVRSGIYD----GSNEPEHAPDVTVDGVYEAIKHIYKRE 340          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A8K1CC39_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC39_PYTOL)

HSP 1 Score: 253 bits (646), Expect = 2.410e-74
Identity = 142/341 (41.64%), Postives = 201/341 (58.94%), Query Frame = 3
Query:  153 SKASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSG--GASQTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVH---DDVRDCVEFAMKRE 1160
            S  S ++FG+AFDIDGVLVRG  V+P ARE LK+L++  +P VF+TN GG  E  KA  L K LGV+++   ++LSH+PMR LA ++   R+++LGSS       + G +   T E+ A   PG F F   + Y +++         H  P+ A++++HDP+DWA E Q+ VDVL GG+P GSG    +QTP++ISN DF+F++ Y  PRFA GAF   +R+LY K  GK +  +  +GKP   T+ YA  LL K        AG + S  +  +Y +GDNP  DI+GAN  G  W S LVRTG++  T       +DP H      D V + +++  K E
Sbjct:   10 STPSEATFGIAFDIDGVLVRGGHVIPRAREVLKSLQEKNIPHVFLTNNGGVLEAAKAGSLGKTLGVEIEPERMILSHTPMRGLAEKFRDSRILLLGSSDVNNVAREYGFKKITTVEDLARHSPGQFAF---KTYEQKNAPY------HDEPIEAIIIMHDPIDWAPELQITVDVLIGGNPLGSGRPDGTQTPLFISNEDFVFSSEYPFPRFAQGAFMSCLRLLYNKYTGK-DLEVTHYGKPHAVTYAYAEALLNK-------IAGRTASNPLKSIYGIGDNPHADIQGANNAGDHWSSILVRTGIYDGT-------KDPEHIPDVYADTVFEAIQYIYKNE 326          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: A0A225WSJ8_9STRA (HAD hydrolase protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSJ8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 8.670e-71
Identity = 141/353 (39.94%), Postives = 202/353 (57.22%), Query Frame = 3
Query:  111 SRNVRVIAYGRPLHSKASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGAS--QTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAE-DPAHFVHDDVRDCVEFAMKRE 1160
            +R  R  +     H+ AS  SFG+AFDIDGVL+RG   LP A+  L++L    VP +F+TNGGGC EE+KA+ L+K L + ++   ++LSH+PMR +A  Y  KRV+++GS       +  G    V+ E+    +P  + F    +Y       +     H  P+ A++V+HDP++WA E QV VDVL GGDPPGSG  S  QTP+++SN DF F+  Y  PRFA GAF   +++LY    G+ +  +  +GKP + T++YA+ LL   SA            ++  +Y +GDNP  DI+GAN  G  W S LVRTG++     G  D E DP   VH  V + ++   KRE
Sbjct:   12 TRYSRAFSVASASHATASAPSFGIAFDIDGVLIRGGHELPKAKRVLESLRSNNVPHIFLTNGGGCMEEDKAKNLSKVLDLTINPEHMILSHTPMREIAEAYGDKRVLIMGSYDVWNVAKRYGFNKVVSVEDLLHHYPMQYPFN---HY------EQTMAPHHEEPIGAIIVMHDPINWAPEIQVAVDVLIGGDPPGSGRPSGKQTPLFVSNDDFTFSGAYPFPRFAQGAFTRCLKLLYEDLTGR-KLEVTNYGKPHEVTYNYAKRLLNTISAH---------PDRLRHMYGIGDNPLSDIQGANNAGDEWTSILVRTGIYD----GTKDPEHDPDVIVHG-VYEAIKHIYKRE 340          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: W2QA70_PHYPN (TIGR01456 family HAD hydrolase n=7 Tax=Phytophthora TaxID=4783 RepID=W2QA70_PHYPN)

HSP 1 Score: 244 bits (622), Expect = 1.250e-70
Identity = 142/361 (39.34%), Postives = 203/361 (56.23%), Query Frame = 3
Query:   84 MLRQLLGRPSRNVRVIAYGRPLHSKASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGAS--QTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKRE 1160
            ++R L  R SR   V++     +S  ST SFG+AFDIDGVL+RG   LP A+  L++L    VP +F+TNGGGC EE+KA  L+  L + ++   ++LSH+PMR +A  Y  KRV+++GS       +  G +  V+ E+     P  + F    +Y +R          H  P+ A++V+HDP++WA + QV VDVL GGDPPGSG  S  QTP+++SN DF+F+  Y  PRFA GAF   +++LY    G+ +  +  +GKP   T++YA  LL   S           S  +  +Y +GDNP  DI+GAN  G  W S LVRTG++     G  D E       DDV + ++   KRE
Sbjct:    6 LVRSLSRRYSRAFSVVSSSS--NSVVSTPSFGIAFDIDGVLIRGGHKLPKAKRVLQSLRANNVPHIFLTNGGGCMEEKKAENLSNILDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFI---HYEQRPAPH------HEEPIDAIIVMHDPINWAPDIQVAVDVLIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYEDLTGR-KLEVTNYGKPHIITYNYAERLLNTISGQ---------SEPLKHMYGIGDNPLSDIQGANNAGDEWTSILVRTGIYD----GSKDPEHEPDVTVDDVYEAIKHIYKRE 341          
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Match: W2GZD0_PHYPR (TIGR01456 family HAD hydrolase n=7 Tax=Phytophthora TaxID=4783 RepID=W2GZD0_PHYPR)

HSP 1 Score: 244 bits (622), Expect = 1.250e-70
Identity = 142/361 (39.34%), Postives = 203/361 (56.23%), Query Frame = 3
Query:   84 MLRQLLGRPSRNVRVIAYGRPLHSKASTSSFGMAFDIDGVLVRGPGVLPGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVLSHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGIFHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVLHGGDPPGSGGAS--QTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKRFGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYMVGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDVRDCVEFAMKRE 1160
            ++R L  R SR   V++     +S  ST SFG+AFDIDGVL+RG   LP A+  L++L    VP +F+TNGGGC EE+KA  L+  L + ++   ++LSH+PMR +A  Y  KRV+++GS       +  G +  V+ E+     P  + F    +Y +R          H  P+ A++V+HDP++WA + QV VDVL GGDPPGSG  S  QTP+++SN DF+F+  Y  PRFA GAF   +++LY    G+ +  +  +GKP   T++YA  LL   S           S  +  +Y +GDNP  DI+GAN  G  W S LVRTG++     G  D E       DDV + ++   KRE
Sbjct:    6 LVRSLSRRYSRAFSVVSSSS--NSVVSTPSFGIAFDIDGVLIRGGHELPKAKRVLQSLRANNVPHIFLTNGGGCMEEKKAENLSNILDLPINPEHMILSHTPMREIAKTYGDKRVLIMGSHDVWHVAKCYGFKKVVSVEDLLHHHPTQYPFI---HYEQRPAPH------HEEPIDAIIVMHDPINWAPDIQVAVDVLIGGDPPGSGRPSGKQTPLFVSNDDFVFSGAYPFPRFAQGAFTRCLKLLYEDLTGR-KLEVTNYGKPHIITYNYAERLLNTISGQ---------SEPLKHMYGIGDNPLSDIQGANNAGDEWTSILVRTGIYD----GSKDPEHEPDVTVDDVYEAIKHIYKRE 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12.1748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K396_9PHAE4.180e-19278.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU48_9STRA3.140e-10651.14HAD-like domain-containing protein n=1 Tax=Tribone... [more]
D7FVJ2_ECTSI2.300e-9578.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1CB61_PYTOL3.800e-7642.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0G4F8D8_VITBC9.930e-7543.43Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A3F2RHX1_9STRA2.010e-7440.61Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8K1CC39_PYTOL2.410e-7441.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225WSJ8_9STRA8.670e-7139.94HAD hydrolase protein n=1 Tax=Phytophthora megakar... [more]
W2QA70_PHYPN1.250e-7039.34TIGR01456 family HAD hydrolase n=7 Tax=Phytophthor... [more]
W2GZD0_PHYPR1.250e-7039.34TIGR01456 family HAD hydrolase n=7 Tax=Phytophthor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12contigH-canaliculatus_F_contig12:37224..44621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score304.7
Seed ortholog evalue5.9e-80
Seed eggNOG ortholog2880.D7FVJ2
Preferred nameCECR5
KEGG rclassRC00055,RC00523
KEGG koko:K22503
KEGG ReactionR05577
KEGG Pathwayko00970,map00970
KEGG ModuleM00359
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0006996,GO:0007005,GO:0007006,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0016787,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0061024,GO:0071704,GO:0071840,GO:0090407,GO:1901576
EggNOG free text desc.glycerophospholipid biosynthetic process
EggNOG OGsCOG0647@1,KOG1618@2759
EC6.1.1.12
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01007,ko03016
Hectar predicted targeting categorymitochondrion
Exons8
Model size2210
Cds size1104
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12.1748.1prot_H-canaliculatus_F_contig12.1748.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12 38253..44544 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928908.9703746-UTR-H-canaliculatus_F_contig12:37223..382521622928908.9703746-UTR-H-canaliculatus_F_contig12:37223..38252Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12 37224..38252 -
1696845608.2781596-UTR-H-canaliculatus_F_contig12:37223..382521696845608.2781596-UTR-H-canaliculatus_F_contig12:37223..38252Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12 37224..38252 -
1622928909.2128682-UTR-H-canaliculatus_F_contig12:44544..446211622928909.2128682-UTR-H-canaliculatus_F_contig12:44544..44621Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12 44545..44621 -
1696845608.3867488-UTR-H-canaliculatus_F_contig12:44544..446211696845608.3867488-UTR-H-canaliculatus_F_contig12:44544..44621Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig12 44545..44621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928909.0265987-CDS-H-canaliculatus_F_contig12:38252..384491622928909.0265987-CDS-H-canaliculatus_F_contig12:38252..38449Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 38253..38449 -
1696845608.2910573-CDS-H-canaliculatus_F_contig12:38252..384491696845608.2910573-CDS-H-canaliculatus_F_contig12:38252..38449Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 38253..38449 -
1622928909.0466294-CDS-H-canaliculatus_F_contig12:38698..388971622928909.0466294-CDS-H-canaliculatus_F_contig12:38698..38897Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 38699..38897 -
1696845608.3001637-CDS-H-canaliculatus_F_contig12:38698..388971696845608.3001637-CDS-H-canaliculatus_F_contig12:38698..38897Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 38699..38897 -
1622928909.0588598-CDS-H-canaliculatus_F_contig12:39221..393221622928909.0588598-CDS-H-canaliculatus_F_contig12:39221..39322Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 39222..39322 -
1696845608.3217843-CDS-H-canaliculatus_F_contig12:39221..393221696845608.3217843-CDS-H-canaliculatus_F_contig12:39221..39322Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 39222..39322 -
1622928909.0732703-CDS-H-canaliculatus_F_contig12:39687..397941622928909.0732703-CDS-H-canaliculatus_F_contig12:39687..39794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 39688..39794 -
1696845608.3352427-CDS-H-canaliculatus_F_contig12:39687..397941696845608.3352427-CDS-H-canaliculatus_F_contig12:39687..39794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 39688..39794 -
1622928909.1138487-CDS-H-canaliculatus_F_contig12:40350..404391622928909.1138487-CDS-H-canaliculatus_F_contig12:40350..40439Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 40351..40439 -
1696845608.3468442-CDS-H-canaliculatus_F_contig12:40350..404391696845608.3468442-CDS-H-canaliculatus_F_contig12:40350..40439Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 40351..40439 -
1622928909.1269088-CDS-H-canaliculatus_F_contig12:40888..410761622928909.1269088-CDS-H-canaliculatus_F_contig12:40888..41076Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 40889..41076 -
1696845608.3582625-CDS-H-canaliculatus_F_contig12:40888..410761696845608.3582625-CDS-H-canaliculatus_F_contig12:40888..41076Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 40889..41076 -
1622928909.1426654-CDS-H-canaliculatus_F_contig12:41470..415881622928909.1426654-CDS-H-canaliculatus_F_contig12:41470..41588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 41471..41588 -
1696845608.3670092-CDS-H-canaliculatus_F_contig12:41470..415881696845608.3670092-CDS-H-canaliculatus_F_contig12:41470..41588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 41471..41588 -
1622928909.1875439-CDS-H-canaliculatus_F_contig12:44439..445441622928909.1875439-CDS-H-canaliculatus_F_contig12:44439..44544Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 44440..44544 -
1696845608.3766732-CDS-H-canaliculatus_F_contig12:44439..445441696845608.3766732-CDS-H-canaliculatus_F_contig12:44439..44544Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12 44440..44544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12.1748.1

>prot_H-canaliculatus_F_contig12.1748.1 ID=prot_H-canaliculatus_F_contig12.1748.1|Name=mRNA_H-canaliculatus_F_contig12.1748.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=368bp
MAMLRQLLGRPSRNVRVIAYGRPLHSKASTSSFGMAFDIDGVLVRGPGVL
PGARESLKALEDAGVPFVFVTNGGGCTEEEKARELTKKLGVQVDRSMVVL
SHSPMRALAPEYSGKRVMVLGSSAKQIAEEDLGLRDTVTPEEFAGEWPGI
FHFTGERYYVKRDFTRRLGEGEHPRPVSAVMVLHDPLDWALEAQVVVDVL
HGGDPPGSGGASQTPMYISNPDFIFAAMYQEPRFAAGAFADTVRMLYAKR
FGKGEPAIEVFGKPTKSTFDYARGLLEKRSATIGFSAGESPSPQIDRVYM
VGDNPSGDIRGANEVGPPWVSNLVRTGVFQDTIGGGNDAEDPAHFVHDDV
RDCVEFAMKREARLGEE*
back to top

mRNA from alignment at H-canaliculatus_F_contig12:37224..44621-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12.1748.1 ID=mRNA_H-canaliculatus_F_contig12.1748.1|Name=mRNA_H-canaliculatus_F_contig12.1748.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12:37224..44621- (Hapterophycus canaliculatus Oshoro5f female)
TCGCGGAGCCCCTTTCCGAATTGAACTGATGCTGGCAATGACAGAAGCAG CATAGTCACTAGCTTTACCTGGGCTCTATGGCAATGCTCCGGCAACTTCT CGGACGCCCTTCCCGCAATGTTCGTGTTATAGCTTATGGGAGACCCCTGC ACTCCAAGGCGTCGACATCTTCGTTCGGAATGGTGGGTCATTCTAGGTCT TGTGGACCCGTTGCATGCGACAAGGCGGCGTAGGCAGACTATCGGCGTGG TGAAGCTGACGAGCTCTACGGCAGTACAGGCGCTCCATGCGGCAACCGTA GACGAAACACAACAACAGCTATAGTTGCTGATAGGAGCTAAGAAGGCCAG CGTGGCAATTTTCTGAAGGCTTCTTCCGCAATGGTGCACAGGCACTGCAG ACTGCCAGTCCAATGTTTGGGAGAACACGAACCGGTCCTGAAGTTGAGGA ATGCATTACTTCGTACAACCCAAATCAGGTGTACAACACTGCACACATAA CGGAAACGACAACCTGTACCTACGGCAGTGTTTCCATGCCATTTTTTTCG TGGAGCGGTATACACCTTTGCGGTATGTATTGTCTCGCCCGAAGTCACCT GCAGTATCTACAGTACAAACGGAAAATTGTGAGTTTACTCCGACCGTTCT CGACCTGAGAAACATCCCTGCCTTCACCTGTAGTCTAGTCCTGCTGTGGG CGCTTTCCTATTATCCCGACAATTCAGTTCGTACCTGGTATTCTACAACA AGCGCAAGACTTCGAGGGACCTCCGACTGCTTCATGTGCCGAAAGGAATC CAACGTCTTCCACGTTTTTGTCCACAACTTACAGCAATTTCTTGTGATAT CATGAGGAGATAGGCCATGTGTTAATCTAGAATCTTGAAAAATGCTTCCT GTGATAAGACACCAAGCAAGTGAGTCCAGGTACGTACTTGGGAAGACCAT CCCAAAAGCATGTCAGTGGTGGATTGATTTAAAGACTGCAAGTCCTTTCG GGATCACCATACTCTGCGTACTTCGCAGACTCTCGAGTCTTTCGGACATG ATACTCAAGCATTTCTCGGACTCCGAAGTTTTCTGGGGGGCTCAGACGCT CAGATACGTTAGACTCTAAGGAATCTGAAGACTCCTGGTGCATGGGATTC CAAGACTCTGAGGACTCGAAGGAAGACTCTCAAGACTATGAGGGCTAGGG TTAAATTGTGGTGCATTCGTTCGAAGCGTGAGACGTACTTGAAAGCTTCA ACCAACCATGGGATCGTACTTTTATTTTCTAAGTTCAAACAAGTAACGAA ATACTGTCCTCATTTAAATGCCAACTCTCTCATCCTACTGGTGCTAAAAG GGGCACCCATGTGAGGCAAACCTCATACTGATAGAATCTAGATAGTCACA AACCTGCGGGGTGGACCCTTGAAGAGAATGCCGCCAGTAAAGCACCCAGA AGCAGGAACCTAGTCCGGACATAAAGGTTTTGCTCAGAAGCATGTGGCAC AGTCCTACAATCAAATACCACCGCCATGTCCGAAAGCTTTCAGGCATGTT TTTGTTGGCCTGCCGTCACACATGACCGTGGACATTCATGCAGCGTTCCC CTTTGCCTCCACCGTCACCAACGTTAGACGGAAACCCACACAACCCTGGC TGTAGTCTTGGAACTTTCGGATTGATTCAAGGGACCAATTTGGCAAGGAC CCAGGCATAGTTAAACCAACACCATATGCTCCGCTCTCCTCTGCGTCCGC CCGCCCACGCTCCTCCATGACCCTTCCCTCCTTGCTCGTCACGGTGGGAG AAATCTGGGAGCTGTCCAAAGTCGGACGTGTGTCGAATGTTCAGAATCTT TTGGGATCCGAAGCTCTGACGTGCTTGAAACTACTGAGTCTTTCAAAGGC TTAGACTTTTAATACTTCCGGACTCGAGATTCTTTGGAGGACCAAGACTC TCAAGACTTTCCAGACTAAGGGTCTTGAGGGATTCCAGGCAAAAAACACT CTGCAGTCTACTAGTCTCAAGCGGTTCAGACTCTCCCGACTCCGAGGTTT GAGTGATTCAGACTTTGATTACTTTTGAGACTCAGAGTATTTCGAAGCTC GGAGTTTATGGAATCTTCCGACCCTGAGTCTTTCTGGAGTTGAGACTTTG GTGGACTCCAAACCTCGAGTTTATCACAAGTATATGTGAGACTCAAGCAC TTTCCAGACTCCTCGTCTTTTGGGGTCCAAGACTCTTGGGTACTTTCCAG ATACTCAGTCTTTCGGGGTTCAGACGTAGGGTACTTCCAGACTCCGCGTA GTTCGAGTCCTGCCGAGGACTATGAGGACTCGGAGTAAGACTCTTGAAGT CTCAGAGCCAAGACTATACTCTGAGCATCTGTGCCATTCAAGTATATCTC CGACGCTGTTCCGTCCCATGTATTTTTCTTTAGAAAGTCAACGTCGAAGA AAGACCGTTGCCCAAAATAATACTGAAGGGGTAGGACCGTTCTCTTCCTT TATATGTTGCAGTTGATCCGCCCCCACAACGGGTCAGCTCATACGACAAA TCCCAGTAAAGCGAAGATCGATCTGCCTGCAAATCATGCGTTCGCTGTGG CTAACCCTCTTTGAACAAGCGATGTATGCCTGAAAAGGCTCGGGACAGCG GTAGTTAGATCCTTATGTCTCCATTTTTGTCTGCCAATACTTGCAAATTC TCTAGATTAGTAGTTTTAATATTATTCTACAATGTTAACTTTTTTTCTCA GCCTCATCGGCGCATTCGAGCGTGCCAACCGACACCTTTGATACGGTTGC CCTCCGTTCTTGCCTTGACTGTCACTAGGATTCCGCGAGCGAATAGAGGG CTTGCTGTGAATCACATCGATGTCTCTCGAGTTCAATATCGCTAGAGGAA ATAGCCAGTGCCGAATGGATATCGTCTCCAGCTAGCCACTTCGAGCTTCC GTCTCAACGCCACTAACCTAGGCTAACTACAAACGTTGTAATACCCCCTC TCACCCCCCTCGCACCTCACCAAAACGTGAAAGGCTTTCGACATCGACGG GGTGCTTGTGCGGGGACCGGGTGTGCTACCCGGAGCGAGAGAGAGCCTGA AAGCGCTAGAAGACGCCGGCGTCCCGTTTGTGTTCGTCACCAATGGTGGT GGTAAGCAAGTGATCCACCGCTTACTGGCTGCCTCAAACAACAATAATTT GCCGCAGTTTCACCCCGGTTTCAACGTAAATGGTGGCGCTTTGCTATTGT TCATCTTCGCCCTATCGAAGTCGCGTGGCGTGCGGTTCGTTCCAACACGT TTTGCTATCAGTTTGGATTCCAAGCACCTGATCGCGCTCGTTTATTGTGT ATGGTCCGTGTGCCTAGGTGTGTGGCGTGCCACACCGCCCCTTGCCGAAT GGATGTGATGGGCGAGCAAACGGGCGACCGCACGTCTACGGTCACTCATG ATGCGCAAGCCCAAGCTTGGATCTGCGTTCCATCTCACAAGTATGCGTGT GTCTTTGTTTTCGTGTTCGCTGGCACTCTGGCACTCCGAACCAAGGCTGC ACGGAGGAGGAGAAAGCGAGAGAGCTGACGAAGAAGCTGGGCGTGCAGGT CGATCGCTCGATGGTGGTCCTTTCCCATTCTCCTATGAGAGCACTCGCTC CGGAGTACTCCGGGAAGAGGGTGATGGTGCTGGGGTCATCGGCAAAGCAA ATAGCCGAGGAAGATCTAGGCCTGCGAGACACGGTTGAGTTCATACTTTA CTGAGTTTTGACCTGATGACTTCTTGCCTGGGTGAACCCTGAAAAACATG GCATGTGTGAGTAGCTTCGCTCTGCGGTCAGTTCACAAGTTCGAACACGA TTATTGACGCAGCATCGCAATCTTCACCGGTTGTCCACGACACGCTATGG CACTGAATTTTGCAATCTAACACCGTTTGCGCGCCCTCGCGGAATCCCGG GGGTGGCCGATGTTATGCATTTCTTTCTGGTTGTCTCATCCACGATGTCG GGGGATCAAGTCAACGACACGCACGTTTACGGTTTGGATATGGCCCGCTT CTTGCTGCCCCTCCGAGATTGTGATAGACCAACCAGTGAAACTCGAGTAA TAGCAGCAATGCTGTAACTGAGTGTCGCTTTCCCTCCCTTGAGCATTGTT TTGTTTCGAAATCGGGATGACGTTTGCCGCAGGTGACACCGGAGGAGTTT GCCGGCGAGTGGCCAGGCATTTTTCACTTCACCGGGGAGCGTTACTACGT GAAGAGAGATTTCACACGTAGGTAGGTTTCCTTGACCGACGGGAACGTAG TCATTTGTAGACAACTCCTTATTCTCATCTTCCTGAAGAGTCATTTTTCC CCGGCGGGTAATTTGCTGCTCTTGTCATCTGTGCTACACGAACTTTTGCT GCATGCGTTCGCTCGTAGAATACTGACTCGAAATGAGCGACATTACGGCT GTCTACTTGCCTACCTCTACTTTCGTGCGAGATTGTACCGCAGCCAACTA AGGGACGATCCCAGGCATTTCCGCGAGTGTATAACTAAGCGACCACCACT TGAGTGGAGAAAGTTCGCGCTCATTCCCTCCTCGGCATTTTTGCTGCGGG ACACGTCTTCGCTTCGGTTCCTCAGTCATGATGATATATCTCGTGAAAGC GCGTGGCGCATATCGCGTGCGGGCAAGTGAATCAAGAGGCGAACCATAGA TTCGAAATGGTGCGCGCTTGGTGGGAAGGAAGTCCAAATCCTACATCCAA AAGCTGTTATCCGGTCGGGCGACACACTGCTCTCTTCTTGTTGTTGCATG TTGCCACGTTATTTTTTCACGGTCAAGGCTGGGCGAGGGTGAACACCCCC GTCCCGTGTCTGCCGTGATGGTGCTGCACGACCCACTGGACTGGGCCCTC GAGGCTCAAGTCGTCGTCGACGTCCTGCATGGAGGTGCGTCCGATCGCAA AGCATGCTCATAAGGGCTTGTTCTTGGCCGAGTACGGCGGTTTCCTGAGG GACACAGGAAAGCAGCTGATTTTGTAGAGGTACGTCCAGTCGACAATCCT CTGACTCAACTTGGAGAACAATGTTGAATTATTCTTTTTCGTCGGGACGT CGATTCTACGGTTCCGTCCTACTTATACGCGCGCTTCTCTCGGTCGCGAG CGAAAAGAACCTGTCACCCCATCCAACGCGACGAAATCCACTCGCACACT ACGTGGCAGCAGACGTCCCGCCTCTGCCGCCGCTTGAAGCCATGCTTGAC AATCATCAACTGCTTTGCTCCGCCTTGCCGATACCTCCCGCGTCTCCAGG AGACCCCCCCGGATCCGGTGGCGCCTCGCAAACCCCCATGTACATTTCCA ATCCGGACTTCATTTTCGCCGCCATGTACCAGGAACCAAGATTTGCCGCG GTTCGTGCCCGGCGGTAGATCTAGGAGACTGTCTTTAGGTTTCCCTAGTG CCGGTTTAGAAACTCTCGCATTGCGACAAAGCTCAAACCTCGGTGATTCA GTAGAATCGATCGAGCAACGACTAAGGTAATGCGGTGGCCCCACCGGCCA TGATTGACGCCTTTCGCCTTTCGTATCAAGCGCCGCTGCGCGTTGCCGAG GAGGGCGTGGCTGGAGTCCTTTTTGTTCATGGTCGCCCGGAGATTATTCC TCCCGAGCGAGTTGATCGTGATGGGGGAATCAACTCTTGTCCATGATTGG TACCTTGTTTCTCCCGGACTCCAGGGCGCCTTCGCCGACACCGTGCGAAT GTTGTACGCCAAGAGATTCGGAAAGGGCGAGCCGGCGATAGAGGTCTTCG GCAAGCCGACCAAGTCGACCTTCGACTACGCACGGGGTTTACTGGAGAAG CGCAGCGCGACCATCGGCTTCTCAGCGGGAGAATCCCCAAGCCCTCAGAT CGATCGAGTTTACATGGTTGGAGGTGAGCAGACCAGTTGGCGGACCTGAC CACGTGCTGGGGTTCGTTAGTCCACCTCCGCGGCAGCCTTCCGGATTGAG CGAGTTGTCACAGCGGAAGGCCAATCAACTGCCAGCGAGAAATATCCCGC TGCCTGGAATCCGGGTAATGCTTGAGCGCATTTCTTCAAGGTACTCCTCC ACGACGTGTGATCTGCGTTCCATACTTTTCAGCAACACCCCGGCCGTTAA ACCTCATTATTTGTATTCGCAGACAACCCAAGTGGAGATATCCGAGGAGC GAACGAAGTGGGACCTCCATGGGTTTCTAACCTTGTGAGGACAGGCGTCT TTCAAGACACCATTGGTGGAGGCAATGACGCCGAAGATCCGGCACACTTT GTCCACGACGACGTGAGAGACTGCGTAGAGTTCGCTATGAAACGAGAAGC CAGGCTTGGTGAAGAGTAATCGCGCGTTGCCGAAGAGGTTGGCGGGTGGT CATCCCCTCGCACGCCATGGGGGCATAAGGGGATTCGTCTCGGTCGAGAC GCAGCTTGACGTCGTCGTGGCGAACAACTAACGCGCAAATTTCCCAAACT ATTCCGAGATATTTTGACGCCTTCGAGTAACGGTGATTCCCGAGGGAGCT ACCAGTATTTGGGTAGGGAGGAACAGGCGTGTAACAAACTGCTTGAGCAA TAGCTGTGGAGCTTGCGAGGAAGGGACACTACTTCGGGCGGGTCGAAGAG GGAAACGATTCCAAGTCTGTTCTGGCCTTTGGCCTACCTTTCACGGTTTT GTCGTTTCTCAGGGGAGAAATGTGGTGTGGTCGTACTCTTTCCGACAAAA TGGAGGCTCGGCTCGTATTACGTACGAACCTCGAGACGGCCCGTGGAAAT GAAATCGTCGCTGTTTTCGATTGGTGTACCAGCCATCGAGGCAGGTCCCA AGGGGAAGGTGGATACAAGTGAGGTGGTCACTATTTTGATCGCAGTTGAC GCACCTCGCGAGCACAATTTCAAATTGCTCAGGGTCAAGTATATTTTGTG GACACATTTCCTTTTCAGGCCCCCTCGCCCGACATTGGTTGCTAGTGAAG ATGTGTCCCAAGTCAAAGGAGAATGTGTCGATGGGGTCGTCGTTTGTGTG TGACTGCTACTAAGAATTTGCCGGGCACCTCGTACAGGAGCTACAGCCCT CCGCAAATGTTACACACGTTTGGCTCATAAGCTGCGGCGAATAGTGCATT GGGAACCTCGATGACGGGGTACATTTAGAAGCTACACCCGGCAAAGTGCT CCGAGCACTGCGAGGGTGTCAAACGAGGGAATTGCTCGGGGATAATTGTC AGAGTGGCTTTATGGGGTGGCGTTCACGAAATTCAGGAACGCACAGCCCG GGAACGTTTGCCCTCAAGTTCCTACAAGTGTGTGTCATTATTTCACGGAT TTGACGCCGAAAACGAAACCCCAAGTGCGCACTCCGGTTGCGTTCGAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12:37224..44621-

>mRNA_H-canaliculatus_F_contig12.1748.1 ID=mRNA_H-canaliculatus_F_contig12.1748.1|Name=mRNA_H-canaliculatus_F_contig12.1748.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2208bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12:37224..44621- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCAATGCTCCGGCAACTTCTCGGACGCCCTTCCCGCAATGTTCGTGT
TATAGCTTATGGGAGACCCCTGCACTCCAAGGCGTCGACATCTTCGTTCG
GAATGATGGCAATGCTCCGGCAACTTCTCGGACGCCCTTCCCGCAATGTT
CGTGTTATAGCTTATGGGAGACCCCTGCACTCCAAGGCGTCGACATCTTC
GTTCGGAATGGCTTTCGACATCGACGGGGTGCTTGTGCGGGGACCGGGTG
TGCTACCCGGAGCGAGAGAGAGCCTGAAAGCGCTAGAAGACGCCGGCGTC
CCGTTTGTGTTCGTCACCAATGGTGGTGGCTTTCGACATCGACGGGGTGC
TTGTGCGGGGACCGGGTGTGCTACCCGGAGCGAGAGAGAGCCTGAAAGCG
CTAGAAGACGCCGGCGTCCCGTTTGTGTTCGTCACCAATGGTGGTGGCTG
CACGGAGGAGGAGAAAGCGAGAGAGCTGACGAAGAAGCTGGGCGTGCAGG
TCGATCGCTCGATGGTGGTCCTTTCCCATTCTCCTATGAGAGCACTCGCT
CCGGAGTACTCCGGGAAGAGGGTGATGGTGCTGGGGTCATCGGCAAAGCA
AATAGCCGAGGAAGATCTAGGCCTGCGAGACACGGCTGCACGGAGGAGGA
GAAAGCGAGAGAGCTGACGAAGAAGCTGGGCGTGCAGGTCGATCGCTCGA
TGGTGGTCCTTTCCCATTCTCCTATGAGAGCACTCGCTCCGGAGTACTCC
GGGAAGAGGGTGATGGTGCTGGGGTCATCGGCAAAGCAAATAGCCGAGGA
AGATCTAGGCCTGCGAGACACGGTGACACCGGAGGAGTTTGCCGGCGAGT
GGCCAGGCATTTTTCACTTCACCGGGGAGCGTTACTACGTGAAGAGAGAT
TTCACACGTAGGTGACACCGGAGGAGTTTGCCGGCGAGTGGCCAGGCATT
TTTCACTTCACCGGGGAGCGTTACTACGTGAAGAGAGATTTCACACGTAG
GCTGGGCGAGGGTGAACACCCCCGTCCCGTGTCTGCCGTGATGGTGCTGC
ACGACCCACTGGACTGGGCCCTCGAGGCTCAAGTCGTCGTCGACGTCCTG
CATGGAGGCTGGGCGAGGGTGAACACCCCCGTCCCGTGTCTGCCGTGATG
GTGCTGCACGACCCACTGGACTGGGCCCTCGAGGCTCAAGTCGTCGTCGA
CGTCCTGCATGGAGGAGACCCCCCCGGATCCGGTGGCGCCTCGCAAACCC
CCATGTACATTTCCAATCCGGACTTCATTTTCGCCGCCATGTACCAGGAA
CCAAGATTTGCCGCGGAGACCCCCCCGGATCCGGTGGCGCCTCGCAAACC
CCCATGTACATTTCCAATCCGGACTTCATTTTCGCCGCCATGTACCAGGA
ACCAAGATTTGCCGCGGGCGCCTTCGCCGACACCGTGCGAATGTTGTACG
CCAAGAGATTCGGAAAGGGCGAGCCGGCGATAGAGGTCTTCGGCAAGCCG
ACCAAGTCGACCTTCGACTACGCACGGGGTTTACTGGAGAAGCGCAGCGC
GACCATCGGCTTCTCAGCGGGAGAATCCCCAAGCCCTCAGATCGATCGAG
TTTACATGGTTGGAGGGCGCCTTCGCCGACACCGTGCGAATGTTGTACGC
CAAGAGATTCGGAAAGGGCGAGCCGGCGATAGAGGTCTTCGGCAAGCCGA
CCAAGTCGACCTTCGACTACGCACGGGGTTTACTGGAGAAGCGCAGCGCG
ACCATCGGCTTCTCAGCGGGAGAATCCCCAAGCCCTCAGATCGATCGAGT
TTACATGGTTGGAGACAACCCAAGTGGAGATATCCGAGGAGCGAACGAAG
TGGGACCTCCATGGGTTTCTAACCTTGTGAGGACAGGCGTCTTTCAAGAC
ACCATTGGTGGAGGCAATGACGCCGAAGATCCGGCACACTTTGTCCACGA
CGACGTGAGAGACTGCGTAGAGTTCGCTATGAAACGAGAAGCCAGGCTTG
GTGAAGAGTAAACAACCCAAGTGGAGATATCCGAGGAGCGAACGAAGTGG
GACCTCCATGGGTTTCTAACCTTGTGAGGACAGGCGTCTTTCAAGACACC
ATTGGTGGAGGCAATGACGCCGAAGATCCGGCACACTTTGTCCACGACGA
CGTGAGAGACTGCGTAGAGTTCGCTATGAAACGAGAAGCCAGGCTTGGTG
AAGAGTAA
back to top