|
|
Homology
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: D7FK88_ECTSI (SANT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK88_ECTSI) HSP 1 Score: 239 bits (611), Expect = 8.060e-65 Identity = 116/150 (77.33%), Postives = 128/150 (85.33%), Query Frame = 1
Query: 1543 RKGASLLEAYGASKGASTKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAEQSILQAQE 1992
RKGASLLE Y ASKG S K KE MRWRTHRMVEDY N CG I+Y V+ G FG+ EGRFPMERPTTLG++K MRR TVIE+WSPY VALFE AIS+HGKVFHKVAEE++GK+V +VVEFYYMWKKTNHYKQWKSMFRAEQ+ILQAQE
Sbjct: 373 RKGASLLEDYHASKGPSNKPKE-MRWRTHRMVEDYTNVCGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGMRRPTVIERWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMFRAEQAILQAQE 521
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A6H5KPS5_9PHAE (SANT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS5_9PHAE) HSP 1 Score: 236 bits (602), Expect = 2.000e-62 Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 1
Query: 1543 RKGASLLEAYGASKGASTKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAEQSILQAQE 1992
RKGASLLE Y ASKG S K KE MRWRTHRMVEDY N CG I+Y V+ G FG+ EGRFPMERPTTLG++K +RR TVIE+WSP+ VALFE AIS+HGKVFHKVAEE+DGK+V +VVEFYYMWKKTNHYKQWK+MFRAEQ+ILQAQE
Sbjct: 572 RKGASLLEDYHASKGPSNKPKE-MRWRTHRMVEDYTNICGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGIRRPTVIERWSPHDVALFEGAISVHGKVFHKVAEEIDGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQE 720
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A7S0KBC3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBC3_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.480e-39 Identity = 73/130 (56.15%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 1579 SKGASTKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAE 1968
SK +T+ KE RWR HR EDY++ G I+YP GAFG+ ++G +P+ERP TLG+L +P+RR TVIEKWSPY+VA FEAA++++GKVFH V + V KS E+VEFYY+WKKT+HYK+WK E
Sbjct: 232 SKRNNTQIKE-YRWRAHRAAEDYISLVGDIMYPGTYFGAFGYNSDKGNYPVERPNTLGLLTSPLRRPTVIEKWSPYEVASFEAALTLYGKVFHSVQKVVKTKSTKEIVEFYYVWKKTSHYKRWKQQHEPE 360
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A835Z5U6_9STRA (SANT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U6_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.360e-38 Identity = 64/131 (48.85%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 1597 KAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAEQSILQAQ 1989
+ KE RWRTHRMV+D VN CG +YPQV +G +G++PE G + +ER L +++ P+RR + +E+WSP +VA FE A+ I+GK FHK+A EV K+ + +EFYY+WK T HYKQWK +F + +A+
Sbjct: 12 RRKEPQRWRTHRMVDDLVNLCGNSMYPQVSMGPYGYRPEAGSYALERAAMLSMIQHPLRRPSAVEQWSPLEVAKFEGAMCIYGKQFHKIAAEVGTKTCQQAIEFYYVWKLTGHYKQWKKVFYGTAWVQRAE 142
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A7S3HK57_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK57_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.510e-35 Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 1594 TKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMF 1959
+ K RWR H + EDYVN G I+YP+ G +G+ E GRFP+E+ ++LG L P+R+ TVIEKWSP +VA+FEAA++++GK FH V + V KS EV+EFYY WKKTNHYK+WK +
Sbjct: 64 SSGKNNDRWRPHGITEDYVNIIGEIMYPKQTFGPYGYDAENGRFPVEKMSSLGWLLCPLRKPTVIEKWSPIEVAVFEAAMTLYGKNFHTVQKYVKTKSTQEVIEFYYDWKKTNHYKEWKKNY 185
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A6U0ZH30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZH30_9STRA) HSP 1 Score: 144 bits (364), Expect = 7.070e-35 Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 1594 TKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAE 1968
T+ + RWRT +M EDY+ ++YP +++G FG+ P +GRFP+ER LG + P+RR +VIE+WSPY++A FE AI++ GK FHKV V+ K+ EVVEFYY+WKKT HY WK ++ E
Sbjct: 59 TRGRHRKRWRTTQMAEDYMEMVSRLMYPPIQIGPFGYDPLKGRFPVERLHALGYITNPLRRPSVIERWSPYEIAKFEGAIALFGKHFHKVQRAVESKTTKEVVEFYYVWKKTAHYDHWKRIYEPE 183
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A7S4RT22_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RT22_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.020e-34 Identity = 57/118 (48.31%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1615 RWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAE 1968
RWR H+M +DY+ G I+YP +G + + G++P+ER TTLG+L P RR + IEKWSPY++A+FEA++S++GKVFHKV + V K+ E++EFYY+WKK++HY++WK + +
Sbjct: 117 RWRAHQMADDYITLAGNIMYPSTYLGPYAYTHTHGQYPIERLTTLGLLTNPCRRPSPIEKWSPYEIAMFEASLSLYGKVFHKVQKIVRSKTTKEIIEFYYIWKKSSHYRRWKGQYEVD 234
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A4D9CXF5_9STRA (SANT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXF5_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.070e-34 Identity = 64/129 (49.61%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 1573 GASKGASTKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMF 1959
GA G K K RWR RM EDYVN G ++YP+V G +G+ +G P+ERP TLG+L P RR TV+E WSP++VA FE AI + GK F+++++ + KS E +EFYY+WK T+HY+QWK F
Sbjct: 84 GAGSGGG-KGKPVERWRAQRMAEDYVNLVGDLMYPKVSFGPYGYDMAKGEIPLERPNTLGVLMCPARRRTVMEHWSPFEVACFEGAIVLVGKNFYEISKLLPSKSTKECIEFYYVWKMTSHYQQWKRSF 211
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A7S2R001_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R001_9STRA) HSP 1 Score: 136 bits (343), Expect = 6.150e-34 Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 1627 HRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMF 1959
HRM E+Y++ G ++ P +G FG+ P +G++P+ER T G+L +P+RR TV+EKWSPY++A FEAA++ GK FH+V + + KS E+VEFYY+WKKT+HYK WK +
Sbjct: 12 HRMAEEYISLAGELMLPGTHLGPFGYDPAQGKYPIERITAYGVLTSPLRRPTVVEKWSPYEIATFEAAVAFLGKQFHRVQKLIRTKSTKEIVEFYYIWKKTHHYKMWKKQY 122
BLAST of mRNA_H-canaliculatus_F_contig11993.1741.1 vs. uniprot
Match: A0A7S0UFW2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFW2_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.350e-32 Identity = 57/131 (43.51%), Postives = 93/131 (70.99%), Query Frame = 1
Query: 1588 ASTKAKETMRWRTHRMVEDYVNTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWSPYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWKSMFRAEQSIL 1980
AS K K RWR H+M EDY N G ++YP + ++G+ P+E +P+E+ + LG +K+P+RR TVIEKWSPY++ +FE ++ +GK F V++++ K+ EV++FYY+WKKT HYK+WK + +++ ++
Sbjct: 175 ASDKPKA--RWRVHQMAEDYTNLVGSMMYPATQFHSYGYNPQEREYPIEKISLLGFMKSPLRRPTVIEKWSPYEIGIFEGSMLHYGKDFRNVSKQIGTKTTQEVIDFYYIWKKTAHYKRWKEQYISDEELI 303
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 241.5 |
| Seed ortholog evalue | 1.3e-60 |
| Seed eggNOG ortholog | 2880.D7FK88 |
| Preferred name | RCOR3 |
| KEGG ko | ko:K11829 |
| KEGG Pathway | ko05016,map05016 |
| GOs | GO:0000122,GO:0000785,GO:0000981,GO:0000982,GO:0001067,GO:0001078,GO:0001227,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0007596,GO:0007599,GO:0008134,GO:0008150,GO:0008152,GO:0008593,GO:0009611,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033558,GO:0034101,GO:0035065,GO:0035067,GO:0035601,GO:0036211,GO:0042060,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045652,GO:0045654,GO:0045747,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050793,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0060968,GO:0061085,GO:0061086,GO:0065007,GO:0065008,GO:0070013,GO:0070933,GO:0071704,GO:0071840,GO:0080090,GO:0090239,GO:0090241,GO:0090308,GO:0090309,GO:0097159,GO:0098732,GO:0140096,GO:0140110,GO:1901363,GO:1901564,GO:1901983,GO:1901984,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903708,GO:1905268,GO:1905269,GO:1990391,GO:2000026,GO:2000112,GO:2000113,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001141,GO:2001251,GO:2001252 |
| EggNOG free text desc. | transcription corepressor activity |
| EggNOG OGs | KOG1194@1,KOG1194@2759 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | SANT/Myb domain transcription factor |
| Ec32 ortholog | Ec-17_003180.1 |
| Exons | 3 |
| Model size | 2352 |
| Cds size | 2352 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928907.6914668-CDS-H-canaliculatus_F_contig11993:13..517 | 1622928907.6914668-CDS-H-canaliculatus_F_contig11993:13..517 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 14..517 - |
| 1696845607.745491-CDS-H-canaliculatus_F_contig11993:13..517 | 1696845607.745491-CDS-H-canaliculatus_F_contig11993:13..517 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 14..517 - |
| 1622928907.8114002-CDS-H-canaliculatus_F_contig11993:2009..3392 | 1622928907.8114002-CDS-H-canaliculatus_F_contig11993:2009..3392 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 2010..3392 - |
| 1696845607.7563407-CDS-H-canaliculatus_F_contig11993:2009..3392 | 1696845607.7563407-CDS-H-canaliculatus_F_contig11993:2009..3392 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 2010..3392 - |
| 1622928907.8277442-CDS-H-canaliculatus_F_contig11993:3425..3890 | 1622928907.8277442-CDS-H-canaliculatus_F_contig11993:3425..3890 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 3426..3890 - |
| 1696845607.7670095-CDS-H-canaliculatus_F_contig11993:3425..3890 | 1696845607.7670095-CDS-H-canaliculatus_F_contig11993:3425..3890 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11993 3426..3890 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11993.1741.1 >prot_H-canaliculatus_F_contig11993.1741.1 ID=prot_H-canaliculatus_F_contig11993.1741.1|Name=mRNA_H-canaliculatus_F_contig11993.1741.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=784bp
MRGAGGNIRGGGPGGKLRRGANGLTPMECTLRIGPAKPPAPGIGDKDKTL
RVLGQGGSTNGAKEGFGSSNSKTASTGGGKSTLVTQENASGTKRKPIWTP
PAAAAAAAPGVTPTVNGKSSRSRSPPPTSSLVRDNAAAAAAAGAAAAAAA
AAAFAGFSGSSSLVGGLASKGDVAEKRVARRPAPETAALAGEVVVAGSSK
GSRPRATLATFGAAPVAIAGNANPGSRSSNSNSIGSSNSNSSTSRSTTPS
PITTQHQQPSKGRASPSASSSSSLSSTSSPRSAYDGEATSASAPMEEDSN
NESGGKAKRRRRSRVATTPLDHSDRTQQSSGEAFSTDPGSGRRSRRRTDS
GSNSEQPSAAAAAAAATAAAGMASLQRSGSLNGRPLVIPAIAGAATTISV
LPSSFLPPSSSSSSSSPTTASSSSASGAGGGMGGVGAQRVPPVVLKKRSR
PGAKYSNAGSTGLGVGGSNSSGNGSGSGSSVGGGTAAAVGGRGGGGRGVS
GRGRGRGRGRGRGRRKGASLLEAYGASKGASTKAKETMRWRTHRMVEDYV
NTCGGIVYPQVKVGAFGFKPEEGRFPMERPTTLGILKTPMRRATVIEKWS
PYQVALFEAAISIHGKVFHKVAEEVDGKSVPEVVEFYYMWKKTNHYKQWK
SMFRAEQSILQAQEEDSEEEEEDGAGGGRRKEEKEQEKRKTVAGRGGGGQ
PGKQVEIGRRSSSGNPASSSGGGAAGGKAGGSQPQGRGSAGGQPNHRGGS
GSQPNPRGGGGGGQPNPRAGGGSQPNPRGGGGGP back to topmRNA from alignment at H-canaliculatus_F_contig11993:14..3890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig11993.1741.1 ID=mRNA_H-canaliculatus_F_contig11993.1741.1|Name=mRNA_H-canaliculatus_F_contig11993.1741.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3877bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11993:14..3890- (Hapterophycus canaliculatus Oshoro5f female)
ATGAGGGGGGCGGGCGGCAACATCCGAGGGGGCGGGCCGGGGGGGAAGCT
GAGGAGGGGGGCGAATGGGTTGACACCGATGGAGTGCACCCTCCGTATCG
GCCCGGCCAAGCCGCCGGCGCCAGGAATAGGCGACAAGGACAAGACTTTG
AGAGTTCTGGGGCAGGGCGGGAGCACGAACGGGGCCAAAGAGGGCTTCGG
TAGCAGCAACTCCAAAACCGCCTCGACGGGGGGCGGCAAATCGACTCTCG
TGACACAGGAAAACGCCAGCGGGACCAAAAGAAAACCGATCTGGACCCCT
CCTGCTGCTGCTGCCGCTGCTGCTCCGGGCGTCACCCCCACTGTCAACGG
CAAGAGCAGCAGGAGCAGGTCGCCGCCACCGACGTCCTCACTCGTGCGGG
ACAATGCTGCTGCTGCTGCTGCTGCTGGTGCTGCTGCTGCTGCTGCTGCA
GCGGCAGCGTTTGCTGTCGATGTGGTGAGCGAAAAACTCTTGGCGAAGGG
TTTTTCTGGCTCTTCCAGCCTTGTGGGCGGCCTGGCGTCCAAGGGGGATG
TCGCGGAAAAGCGGGTAGCACGACGACCAGCGCCAGAAACGGCAGCTTTG
GCGGGAGAGGTGGTGGTGGCGGGCAGCTCAAAAGGCTCGAGGCCGAGGGC
TACCCTTGCCACCTTTGGCGCCGCACCCGTCGCCATCGCCGGCAACGCCA
ACCCGGGCAGCAGGAGCTCCAACAGCAACAGCATCGGCAGCAGCAACAGC
AACAGCAGCACCAGCAGGAGCACGACTCCATCGCCCATAACTACCCAGCA
CCAGCAGCCGTCGAAGGGGCGGGCTTCGCCATCCGCGAGCTCTTCCTCCT
CTCTGTCGTCGACATCCTCACCGAGATCGGCGTACGACGGCGAGGCAACC
TCCGCATCAGCTCCCATGGAAGAAGACAGCAACAACGAGAGCGGCGGCAA
GGCAAAGCGACGGCGGCGCTCGCGCGTCGCGACAACGCCCCTTGACCACA
GCGACCGCACCCAACAGTCTTCCGGGGAGGCGTTCTCAACCGATCCGGGC
AGCGGGCGGCGCTCTCGCCGCCGCACCGACAGCGGCAGCAACAGCGAGCA
ACCCTCGGCGGCGGCGGCGGCGGCGGCGGCGACAGCGGCGGCGGGAATGG
CGTCCTTGCAGAGATCAGGGTCGCTCAACGGCCGGCCGCTGGTCATTCCA
GCGATCGCAGGCGCAGCGACGACGATATCCGTTCTACCTTCTTCGTTCCT
TCCACCCTCCTCCTCCTCCTCCTCCTCCTCCCCTACTACGGCGTCCTCCT
CCTCTGCATCCGGCGCCGGCGGCGGCATGGGAGGAGTAGGGGCACAAAGA
GTACCACCGGTGGTGTTGAAAAAGCGAAGCCGGCCAGGCGCTAAGTACAG
CAACGCGGGATCCACAGGCCTGGGCGTCGGCGGTAGTAACAGCAGCGGTA
ACGGCAGTGGCTCGGGTAGTTCGGTAGGAGGGGGAACGGCGGCGGCCGTC
GGGGGACGCGGCGGCGGCGGGCGAGGCGTTTCCGGGAGGGGGAGAGGGAG
GGGGCGCGGAAGAGGCAGAGGGCGGCGAAAGGGGGCCTCTTTGCTGGAAG
CGTACGGCGCGTCCAAGGGGGCGAGCACAAAGGCGAAGGAGACCATGCGG
TGGCGCACTCACCGCATGGTGGAAGACTACGTCAACACGTGCGGGGGCAT
CGTGTATCCGCAGGTGAAGGTGGGGGCGTTCGGGTTCAAGCCGGAGGAGG
GGCGGTTCCCCATGGAGCGGCCCACCACGCTGGGAATACTCAAGACGCCG
ATGCGGCGGGCGACGGTGATCGAGAAGTGGAGCCCCTACCAGGTGGCGCT
CTTTGAGGCGGCGATCAGCATCCACGGCAAGGTACGATTCGGCACTGGCG
TATGCGGTTTCTTCCGGGGGGTTCTGCCAGGGCTTCCGCTTTGTTGGAAA
ATCGGAGCGGGGTAGGATTTAGGCCGGGCTGAATGGCCTTGATGGCGAGG
GGTAGGCGCTATCATCTGTCGTGGTTGGCTGTTTTGTGGTGTTGCGTTCG
GCGACTCTTCCAATCTTCCCCGTGTGCTTGGATTTCATAGTCTTTGGGAG
GCCTTTTCGTTGCCCATGAAGACACGATGATACACGTTGGGGAACAACGT
GTGTTAGAAGAACGGTTTTTCGTCTACAACGCTGTACAGCCTTTTTGATC
GATTTCTCTCCCCGCAGACCATACGCGGCTTTTCCCCTTTCGCAGGGTTT
TGGAGTTGTGCCTGATTTCGCGCCTCTCAACACGATGTCTTTCTACTCTC
GCCCCTCTTTGGAACTGCGCCTATCGCATCGTAGCATCGTTTGGCGGTCC
GTTGCGCGATTGACGTCGGTGCATGTCATACGTGTCGCCCTGCAGTTTCA
AAATGGAGTTAGGTTGCGTTTTCCAGTCGTCAGTAGGTCGTCTTCTCGCC
TTGTCTTTTCCCCAACTCCCTTTTGTTCATGGCAAATGGTCGATCATGAC
AGATCGTGAGATGAGGATAGATCGTGGGGTCATGACAGGTCGCGAGTCGC
ATGCATCTTGTCTTGTAGTGTGTCATCTCTGAATCGTGTCTTGTACGAGT
TGTGGTCGGTTGGATTTATGTGCCATATCTTCCTGGCCTGCTGTGTTTGA
GTGTTAGATGCACTGTGTCTCACGTGCGATTTCATCACACATCCCTCCAG
CGTCCTTATCGAAGTTAAGTCTTCAACGCCTACGGTAAAACACAACACAC
ACCGCACGAGGCAACTCGTCATCGCCACCTGCGTTGAAGAATCTAGTCCC
CATCTCTAGAGCTCTAGGTAATCGCTCCTCTATCATCGAGATGCATTCGG
GTTTAGCTATCACCTTTGTACGGGCGTGAGGCTTTTACATCATGTGCATC
ATTCGCACCAAGCCTCACCCTCCTCCCCCCCTACATTGCAATTTCTGTTT
CTCATGAGGAGACGCAGGATTTTTCTTCAACACACCAAAGAGTCCGACAC
GGCAAATCCTTCTGCTAGATGTCTCTGTCGCTGTCTTCCTTGTGCGGGAG
CTTGTGTTTCCCCTTTCATGCCATGTCATGTCATTTCATGTCATGGCGGG
CATGCCTTACGTGGTGGCCCTCCTTCTCTTGTCCTTGAAAGACTTTGCCT
GGCGATCAAGCGAGAGAGTACGCGGCTCGCTCGGCAGTGATGCAGAGGCG
CGGCGTGCTTGACCTGCGTGGATCCCGAACTTGAGCCATGCGCGGCGTGG
CGCAGAGCACCTAGAAGCTCCCGAAACGACGTTGAGAATGGAGTGCGCAT
CCGCTCACCTCGCCAACCACGACCTTGTTTTTGCAAACACGCCTCCGCGC
GGACCCTGGCCGTACCTGAGCAGGTGTTCCACAAGGTGGCGGAGGAGGTG
GACGGCAAGAGCGTGCCCGAGGTCGTTGAGTTCTATTACATGTGGAAAAA
GACGAACCACTACAAGCAGTGGAAATCCATGTTCCGAGCCGAGCAGTCCA
TACTGCAGGCTCAGGAAGAGGACAGCGAGGAGGAGGAGGAGGATGGGGCG
GGGGGGGGACGAAGGAAAGAAGAAAAGGAGCAAGAAAAGCGGAAGACTGT
GGCGGGGAGGGGGGGCGGCGGGCAACCCGGGAAACAGGTTGAAATAGGCC
GCCGATCCTCTTCGGGGAACCCTGCTTCCTCAAGCGGGGGGGGCGCCGCC
GGGGGCAAGGCAGGGGGCAGTCAGCCGCAAGGTCGTGGAAGCGCGGGGGG
TCAGCCAAACCATCGAGGGGGTAGTGGCAGTCAGCCGAACCCCCGTGGGG
GAGGGGGGGGGGGGCAGCCGAACCCACGCGCGGGGGGGGGCAGTCAGCCA
AACCCACGTGGCGGGGGGGGGGGTCCG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig11993:14..3890- >mRNA_H-canaliculatus_F_contig11993.1741.1 ID=mRNA_H-canaliculatus_F_contig11993.1741.1|Name=mRNA_H-canaliculatus_F_contig11993.1741.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4704bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11993:14..3890- (Hapterophycus canaliculatus Oshoro5f female)
ATGAGGGGGGCGGGCGGCAACATCCGAGGGGGCGGGCCGGGGGGGAAGCT
GAGGAGGGGGGCGAATGGGTTGACACCGATGGAGTGCACCCTCCGTATCG
GCCCGGCCAAGCCGCCGGCGCCAGGAATAGGCGACAAGGACAAGACTTTG
AGAGTTCTGGGGCAGGGCGGGAGCACGAACGGGGCCAAAGAGGGCTTCGG
TAGCAGCAACTCCAAAACCGCCTCGACGGGGGGCGGCAAATCGACTCTCG
TGACACAGGAAAACGCCAGCGGGACCAAAAGAAAACCGATCTGGACCCCT
CCTGCTGCTGCTGCCGCTGCTGCTCCGGGCGTCACCCCCACTGTCAACGG
CAAGAGCAGCAGGAGCAGGTCGCCGCCACCGACGTCCTCACTCGTGCGGG
ACAATGCTGCTGCTGCTGCTGCTGCTGGTGCTGCTGCTGCTGCTGCTGCA
GCGGCAGCGTTTGCTATGAGGGGGGCGGGCGGCAACATCCGAGGGGGCGG
GCCGGGGGGGAAGCTGAGGAGGGGGGCGAATGGGTTGACACCGATGGAGT
GCACCCTCCGTATCGGCCCGGCCAAGCCGCCGGCGCCAGGAATAGGCGAC
AAGGACAAGACTTTGAGAGTTCTGGGGCAGGGCGGGAGCACGAACGGGGC
CAAAGAGGGCTTCGGTAGCAGCAACTCCAAAACCGCCTCGACGGGGGGCG
GCAAATCGACTCTCGTGACACAGGAAAACGCCAGCGGGACCAAAAGAAAA
CCGATCTGGACCCCTCCTGCTGCTGCTGCCGCTGCTGCTCCGGGCGTCAC
CCCCACTGTCAACGGCAAGAGCAGCAGGAGCAGGTCGCCGCCACCGACGT
CCTCACTCGTGCGGGACAATGCTGCTGCTGCTGCTGCTGCTGGTGCTGCT
GCTGCTGCTGCTGCAGCGGCAGCGTTTGCTGGTTTTTCTGGCTCTTCCAG
CCTTGTGGGCGGCCTGGCGTCCAAGGGGGATGTCGCGGAAAAGCGGGTAG
CACGACGACCAGCGCCAGAAACGGCAGCTTTGGCGGGAGAGGTGGTGGTG
GCGGGCAGCTCAAAAGGCTCGAGGCCGAGGGCTACCCTTGCCACCTTTGG
CGCCGCACCCGTCGCCATCGCCGGCAACGCCAACCCGGGCAGCAGGAGCT
CCAACAGCAACAGCATCGGCAGCAGCAACAGCAACAGCAGCACCAGCAGG
AGCACGACTCCATCGCCCATAACTACCCAGCACCAGCAGCCGTCGAAGGG
GCGGGCTTCGCCATCCGCGAGCTCTTCCTCCTCTCTGTCGTCGACATCCT
CACCGAGATCGGCGTACGACGGCGAGGCAACCTCCGCATCAGCTCCCATG
GAAGAAGACAGCAACAACGAGAGCGGCGGCAAGGCAAAGCGACGGCGGCG
CTCGCGCGTCGCGACAACGCCCCTTGACCACAGCGACCGCACCCAACAGT
CTTCCGGGGAGGCGTTCTCAACCGATCCGGGCAGCGGGCGGCGCTCTCGC
CGCCGCACCGACAGCGGCAGCAACAGCGAGCAACCCTCGGCGGCGGCGGC
GGCGGCGGCGGCGACAGCGGCGGCGGGAATGGCGTCCTTGCAGAGATCAG
GGTCGCTCAACGGCCGGCCGCTGGTCATTCCAGCGATCGCAGGCGCAGCG
ACGACGATATCCGTTCTACCTTCTTCGTTCCTTCCACCCTCCTCCTCCTC
CTCCTCCTCCTCCCCTACTACGGCGTCCTCCTCCTCTGCATCCGGCGCCG
GCGGCGGCATGGGAGGAGTAGGGGCACAAAGAGTACCACCGGTGGTGTTG
AAAAAGCGAAGCCGGCCAGGCGCTAAGTACAGCAACGCGGGATCCACAGG
CCTGGGCGTCGGCGGTAGTAACAGCAGCGGTAACGGCAGTGGCTCGGGTA
GTTCGGTAGGAGGGGGAACGGCGGCGGCCGTCGGGGGACGCGGCGGCGGC
GGGCGAGGCGTTTCCGGGAGGGGGAGAGGGAGGGGGCGCGGAAGAGGCAG
AGGGCGGCGAAAGGGGGCCTCTTTGCTGGAAGCGTACGGCGCGTCCAAGG
GGGCGAGCACAAAGGCGAAGGAGACCATGCGGTGGCGCACTCACCGCATG
GTGGAAGACTACGTCAACACGTGCGGGGGCATCGTGTATCCGCAGGTGAA
GGTGGGGGCGTTCGGGTTCAAGCCGGAGGAGGGGCGGTTCCCCATGGAGC
GGCCCACCACGCTGGGAATACTCAAGACGCCGATGCGGCGGGCGACGGTG
ATCGAGAAGTGGAGCCCCTACCAGGTGGCGCTCTTTGAGGCGGCGATCAG
CATCCACGGCAAGGGTTTTTCTGGCTCTTCCAGCCTTGTGGGCGGCCTGG
CGTCCAAGGGGGATGTCGCGGAAAAGCGGGTAGCACGACGACCAGCGCCA
GAAACGGCAGCTTTGGCGGGAGAGGTGGTGGTGGCGGGCAGCTCAAAAGG
CTCGAGGCCGAGGGCTACCCTTGCCACCTTTGGCGCCGCACCCGTCGCCA
TCGCCGGCAACGCCAACCCGGGCAGCAGGAGCTCCAACAGCAACAGCATC
GGCAGCAGCAACAGCAACAGCAGCACCAGCAGGAGCACGACTCCATCGCC
CATAACTACCCAGCACCAGCAGCCGTCGAAGGGGCGGGCTTCGCCATCCG
CGAGCTCTTCCTCCTCTCTGTCGTCGACATCCTCACCGAGATCGGCGTAC
GACGGCGAGGCAACCTCCGCATCAGCTCCCATGGAAGAAGACAGCAACAA
CGAGAGCGGCGGCAAGGCAAAGCGACGGCGGCGCTCGCGCGTCGCGACAA
CGCCCCTTGACCACAGCGACCGCACCCAACAGTCTTCCGGGGAGGCGTTC
TCAACCGATCCGGGCAGCGGGCGGCGCTCTCGCCGCCGCACCGACAGCGG
CAGCAACAGCGAGCAACCCTCGGCGGCGGCGGCGGCGGCGGCGGCGACAG
CGGCGGCGGGAATGGCGTCCTTGCAGAGATCAGGGTCGCTCAACGGCCGG
CCGCTGGTCATTCCAGCGATCGCAGGCGCAGCGACGACGATATCCGTTCT
ACCTTCTTCGTTCCTTCCACCCTCCTCCTCCTCCTCCTCCTCCTCCCCTA
CTACGGCGTCCTCCTCCTCTGCATCCGGCGCCGGCGGCGGCATGGGAGGA
GTAGGGGCACAAAGAGTACCACCGGTGGTGTTGAAAAAGCGAAGCCGGCC
AGGCGCTAAGTACAGCAACGCGGGATCCACAGGCCTGGGCGTCGGCGGTA
GTAACAGCAGCGGTAACGGCAGTGGCTCGGGTAGTTCGGTAGGAGGGGGA
ACGGCGGCGGCCGTCGGGGGACGCGGCGGCGGCGGGCGAGGCGTTTCCGG
GAGGGGGAGAGGGAGGGGGCGCGGAAGAGGCAGAGGGCGGCGAAAGGGGG
CCTCTTTGCTGGAAGCGTACGGCGCGTCCAAGGGGGCGAGCACAAAGGCG
AAGGAGACCATGCGGTGGCGCACTCACCGCATGGTGGAAGACTACGTCAA
CACGTGCGGGGGCATCGTGTATCCGCAGGTGAAGGTGGGGGCGTTCGGGT
TCAAGCCGGAGGAGGGGCGGTTCCCCATGGAGCGGCCCACCACGCTGGGA
ATACTCAAGACGCCGATGCGGCGGGCGACGGTGATCGAGAAGTGGAGCCC
CTACCAGGTGGCGCTCTTTGAGGCGGCGATCAGCATCCACGGCAAGGTGT
TCCACAAGGTGGCGGAGGAGGTGGACGGCAAGAGCGTGCCCGAGGTCGTT
GAGTTCTATTACATGTGGAAAAAGACGAACCACTACAAGCAGTGGAAATC
CATGTTCCGAGCCGAGCAGTCCATACTGCAGGCTCAGGAAGAGGACAGCG
AGGAGGAGGAGGAGGATGGGGCGGGGGGGGGACGAAGGAAAGAAGAAAAG
GAGCAAGAAAAGCGGAAGACTGTGGCGGGGAGGGGGGGCGGCGGGCAACC
CGGGAAACAGGTTGAAATAGGCCGCCGATCCTCTTCGGGGAACCCTGCTT
CCTCAAGCGGGGGGGGCGCCGCCGGGGGCAAGGCAGGGGGCAGTCAGCCG
CAAGGTCGTGGAAGCGCGGGGGGTCAGCCAAACCATCGAGGGGGTAGTGG
CAGTCAGCCGAACCCCCGTGGGGGAGGGGGGGGGGGGCAGCCGAACCCAC
GCGCGGGGGGGGGCAGTCAGCCAAACCCACGTGGCGGGGGGGGGGGTCCG
GTGTTCCACAAGGTGGCGGAGGAGGTGGACGGCAAGAGCGTGCCCGAGGT
CGTTGAGTTCTATTACATGTGGAAAAAGACGAACCACTACAAGCAGTGGA
AATCCATGTTCCGAGCCGAGCAGTCCATACTGCAGGCTCAGGAAGAGGAC
AGCGAGGAGGAGGAGGAGGATGGGGCGGGGGGGGGACGAAGGAAAGAAGA
AAAGGAGCAAGAAAAGCGGAAGACTGTGGCGGGGAGGGGGGGCGGCGGGC
AACCCGGGAAACAGGTTGAAATAGGCCGCCGATCCTCTTCGGGGAACCCT
GCTTCCTCAAGCGGGGGGGGCGCCGCCGGGGGCAAGGCAGGGGGCAGTCA
GCCGCAAGGTCGTGGAAGCGCGGGGGGTCAGCCAAACCATCGAGGGGGTA
GTGGCAGTCAGCCGAACCCCCGTGGGGGAGGGGGGGGGGGGCAGCCGAAC
CCACGCGCGGGGGGGGGCAGTCAGCCAAACCCACGTGGCGGGGGGGGGGG
TCCG back to top
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