prot_H-canaliculatus_F_contig11992.1740.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig11992.1740.1
Unique Nameprot_H-canaliculatus_F_contig11992.1740.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length272
Homology
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BLAST of mRNA_H-canaliculatus_F_contig11992.1740.1 vs. uniprot
Match: D7G8X5_ECTSI (Similar to Fe65 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X5_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 7.120e-83
Identity = 229/279 (82.08%), Postives = 239/279 (85.66%), Query Frame = 0 
Query:    2 ATAAATAADVVDLRPSTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLELGPEWATAAVASLGQGAIDPVAAARVDWVSCTASAPGYGLFLRFSGEDDELKLFDVPDEFFDDPPXXXXXXXXXXXXXXXAENAEMEXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GKGSGGKSGGVGSIGKKRKGAADLLAKWRAVASTAGEEAEKEAEKQAKMERWKAQAAAQDPNNSNFTPIGKKRR 271
            A A A    VVDLRP TLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLE GPEWATAAVA+LGQG  DPVAAAR+DWVSCTASAPGYGLFLRFSGEDDE KLFDVPDE+FD   XXXXXXXXXXXXXXX       XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         G  + GKSGG  SIGKKRKGAA+L+ KW+AVASTAGEEAEKEAEKQ KMERWKA+AAA DP+N NFTPIGK+RR
Sbjct:  961 AAAEAPTTSVVDLRPCTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLGGGYYMTTLERGPEWATAAVAALGQGVADPVAAARMDWVSCTASAPGYGLFLRFSGEDDEQKLFDVPDEYFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGSSATGKSGG--SIGKKRKGAANLIDKWKAVASTAGEEAEKEAEKQEKMERWKARAAAMDPDNPNFTPIGKRRR 1237
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11992.1740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8X5_ECTSI7.120e-8382.08Similar to Fe65 n=1 Tax=Ectocarpus siliculosus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11992contigH-canaliculatus_F_contig11992:1266..2081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11992.1740.1mRNA_H-canaliculatus_F_contig11992.1740.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig11992 73..2963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig11992.1740.1 ID=prot_H-canaliculatus_F_contig11992.1740.1|Name=mRNA_H-canaliculatus_F_contig11992.1740.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=272bp
MATAAATAADVVDLRPSTLVWWSDAGDVWNGVSLSGLLGGYGPRRYRNLG
GGYYMTTLELGPEWATAAVASLGQGAIDPVAAARVDWVSCTASAPGYGLF
LRFSGEDDELKLFDVPDEFFDDPPPDPAAAAALAEAEAAAENAEMEAAAA
AAVAATEEAEAAGSEAAATLVTAETGAAPAAEKAKAATTTAATKKRKGKG
SGGKSGGVGSIGKKRKGAADLLAKWRAVASTAGEEAEKEAEKQAKMERWK
AQAAAQDPNNSNFTPIGKKRR*
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