mRNA_H-canaliculatus_F_contig1198.1729.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1198.1729.1
Unique NamemRNA_H-canaliculatus_F_contig1198.1729.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: D8LB66_ECTSI (Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 3.970e-155
Identity = 273/402 (67.91%), Postives = 291/402 (72.39%), Query Frame = 1
Query:  211 MEIDVGSLRCMAPSLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML-TRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIHGGERRLRWFSPPLQPTKKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPPYSLNAG---SGL---VNGQHYARVPGVSPLAPXXXXXXXXXXHLTHGGVTGQRA--ADAADEAVAGARSVSGGDGQAEEXXXXXXXXDRVGADETITMPWWGLFDARDEEVELVCSELLALYRRHGDG 1389
            MEIDVGSLRC+AP+LGIP +RHYDP+D EDAALRL+WAK+LFRAGYRLRFPQ TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHML +  Q+EPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRL RA TRTAWGLANDVLFCPRALSAPPPAVACA IRMAAR+HGG+RRLRW+SPP+Q   K +                              XXXXXXXXXXXXXXX              GL   VNGQH            XXXXXX    H   GG++G +   A  AD  V G +S  GG G  E+             DET T PWW LFDARDEEVELVCSELLALYR HGDG
Sbjct:    1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQGTTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGMGDRGRGGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGLXXXVNGQHVVTXXXXXXXXXXXXXXXTVGDH---GGISGNQGGFAGGADVLVVGVKSSDGGRGGDEDQ-----------GDETATKPWWRLFDARDEEVELVCSELLALYRAHGDG 388          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A835YQW0_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA)

HSP 1 Score: 204 bits (519), Expect = 9.050e-59
Identity = 111/217 (51.15%), Postives = 138/217 (63.59%), Query Frame = 1
Query:  220 DVGSLRCMAPSLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRD-VILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQE-----EPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIHGGERRLRWFS 852
            ++ +LR ++P+L   +      +  ED   R  W   +FRAG+RLR+PQETT TA++LFHRF   E     +R R  V+L TCLFLAGKV E PRRLRDVIN LH+ T A+      EPP LD+AYW MKE++VE EQ +LR I F +D   PYRLLLNYARSLRL R   + AWG  ND LF P AL   PP +ACA I +AAR+      L W +
Sbjct:    9 NLAALRHLSPALSSGATSRSGGSQ-EDLRRRRGWTAAMFRAGHRLRYPQETTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHV-TAAEPGGGAVEPPRLDQAYWDMKEQVVECEQAVLRIIGFDMDGEHPYRLLLNYARSLRLSRELVQLAWGFVNDFLFIPSALELSPPTLACAAISLAARLTDELNDLNWIT 223          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: W7TSF1_9STRA (Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.690e-29
Identity = 87/235 (37.02%), Postives = 116/235 (49.36%), Query Frame = 1
Query:  307 LRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSR--DVILTTCLFLAGKVTEAPRRLRDVINVLH-----MLTRAQ--------------EEPPL----------------------------------LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRA-LSAPPPAVACATIRMAARI---HGGER 834
            +R D  ++L  AG RLR PQET  TA L+FHRF     + ++ R+R  DV+LTTCLFLA KV E PRR+RD IN ++     +L +AQ              +   L                                  LD+ YW +KE +V+ EQ++LR + F ++    YRLLLNYARSLR        AW L ND LF P   L+ P  A A A + +A R+    GG+R
Sbjct:   34 IRQDSVRVLLDAGRRLRLPQETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGNILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQRLLTAAGGDR 268          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A1V9YAW3_9STRA (Cyclin-related protein FAM58A-like isoform 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.250e-24
Identity = 64/163 (39.26%), Postives = 91/163 (55.83%), Query Frame = 1
Query:  349 RLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARI---HGG 828
            RL      T TA+LL HRF  Q+           I  +C+FLA K+TE PR+LRD++NV + +      P  +   Y  MKER+++ EQ +LR + F++D   PY  LLNYA+ LR  RAT + A  L +D  + PR+LS   P +A A + +A  +   HGG
Sbjct:   22 RLHLGYIPTTTAMLLSHRFYAQK--SPQTFPFMDIGASCIFLATKLTEKPRKLRDIMNVAYSIAHKTNSPVPVGSVYTAMKERLLDAEQNILRVLRFELDMDLPYMYLLNYAKFLRCSRATVQVALTLTSDFFYAPRSLSYDAPIIAAACLYVALSLVGEHGG 182          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A7S1CMQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.770e-23
Identity = 67/166 (40.36%), Postives = 82/166 (49.40%), Query Frame = 1
Query:  250 SLGIPSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVL 747
            +L   + RH D    ED  LR          G  L  PQ T   AV   HRF I     KH     V+ T CLFLA KV E PRRLRDV+N    +  +   P  LDKAYW +KE +V  EQ++LR + F      P R +LN +R+L L     + A  LAND L
Sbjct:   24 ALAAAAARHADVTPEEDRTLRRACWAFACDVGLGLDVPQNTVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYSDAPPLALDKAYWHLKEVMVSTEQLVLRALAFATRVEAPSRWILNLSRALDLDNGVVQVALALANDAL 187          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A0G4IYJ5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS)

HSP 1 Score: 108 bits (270), Expect = 2.830e-23
Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = 1
Query:  283 PADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAAR---IHGGERRLRWF 849
            PAD E + +R     ++   G RL+ PQ T  TA  +FHRF  +E +  H      I  TCLF+AGK  E PRRLRDVIN ++   R  + PPL +   +W MKE ++E E+++LR I F VD   P+   +++ R LR           + ND    P  L   P  +AC  + +A     +  G+    WF
Sbjct:    3 PAD-EGSVIRFQATTLIQDVGIRLQVPQMTIATAQTIFHRFFAKEPLADHDPMD--IAQTCLFVAGKSQETPRRLRDVINTVYRY-RNPDLPPLEVADPFWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIPLCLHYEPHVIACGAMYLATELLSVRPGDGDDEWF 191          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A7S0I6B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6B2_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 1.410e-22
Identity = 65/184 (35.33%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  280 DPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPL----LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMAARI 819
            + A  ++A  R      L  AG +LR PQ +  TA++ +HRF  ++    + R R  I TTCLFLAGKV E P++++DV+   +   +AQ + P       K +W +KE I+  E++LL+T++F +     YR LL Y +S++  R   + AW   ND L    AL  PP  VA + + +A+R 
Sbjct:   72 EKAKEKEAQYRRLTVGFLQEAGQKLRLPQLSIATAIVFYHRFYSRKSYDSYDRFR--IATTCLFLAGKVEETPKKIKDVVIEAY---KAQHQKPTGPEPESKEFWALKEEILVCERILLQTLDFDLTVEHAYRPLLAYVKSIKGTRDLAQVAWNFINDSLRTTIALQYPPRCVAASAVHLASRF 250          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A2D4H7H0_MICLE (Uncharacterized protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A2D4H7H0_MICLE)

HSP 1 Score: 105 bits (261), Expect = 3.310e-22
Identity = 65/192 (33.85%), Postives = 103/192 (53.65%), Query Frame = 1
Query:  262 PSHRHYDPADVE-DAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQ----EEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATT--RTAWGLANDVLFCPRALSAPPPAVACATIRMAAR 816
            P+    D  D++ +  LR+   +++  AG  LR PQ    T  +LFHRF   +   KH  S +++   C+ LA K+ EAPRR+RDVINV H L + +      P +LD+ Y   K ++++ E+ +L+ + F V    P+++++ Y + L   R  T  +TAW   ND L     +   P  +ACA I +AAR
Sbjct:   36 PTPSMQDGLDLQSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRIKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDTLRTNVFVRFQPETIACACIYLAAR 225          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: W4GAN4_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAN4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.130e-21
Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  241 MAPSLGIPSHRHYD-PADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLFCPRALSAPPPAVACATIRMA 810
            MA  +  PS   Y  P+  + AA     +  +     RL      T TA++L HR+               I   C+FLA K+TE PR+LRDV+NV + +      P      Y   KER+++ EQ +LR I F +D P PY+ LLN A+ L++ R   + A  LA+D+ +  RAL  PP  +A ++I +A
Sbjct:    1 MAAPVPSPSQSSYTTPSPKKHAA-----SSFIADCSARLHLGHVPTSTAMVLAHRYFATHAAPHSFPQHVDIGAACIFLATKITEKPRKLRDVMNVAYCVAHNVNTPVSTGHEYSAFKERLLDAEQHVLRAIRFDMDVPLPYQHLLNLAKLLQVSRVVVQIALTLASDLFYSARALEYPPHVIAASSIYLA 186          
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Match: A0A0L0S947_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S947_ALLM3)

HSP 1 Score: 104 bits (260), Expect = 1.930e-21
Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  232 LRCMAPSLGI---PSHRHYDPADVEDAALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLH---MLTRAQEEPPLLD---KAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRAT-TRTAWGLANDVLFCPRALSAPPPAVACATIRMAARIH 822
            L  +AP   +   PS  H     +E   LR+    ++ RAG  L  PQ + GTA +L HRF     + K    RD++L   LFLA K+ E PRR+RD+INV+H   +L +   +PP+LD     Y  ++  ++  E  LL+ + F V    P+  L+NY +++RL R    +TAW   ND    P      P  VACA I++AA  H
Sbjct:    9 LNTVAPPAALDRTPSMDHEIDPQLE-LRLRILACDLIQRAGRALSIPQFSVGTAQVLLHRFYFAASLKKFG-VRDMVLGA-LFLATKLEETPRRMRDIINVVHHAVLLQQGHPDPPMLDVHGMEYADLERAMMRAEMYLLKYLAFHVHVAHPHMWLVNYLQAMRLARPPLAQTAWNYVNDSYRLPLLCMVQPHVVACAAIQLAADDH 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1198.1729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB66_ECTSI3.970e-15567.91Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_... [more]
A0A835YQW0_9STRA9.050e-5951.15Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
W7TSF1_9STRA4.690e-2937.02Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A1V9YAW3_9STRA4.250e-2439.26Cyclin-related protein FAM58A-like isoform 1 n=1 T... [more]
A0A7S1CMQ2_9STRA1.770e-2340.36Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0G4IYJ5_PLABS2.830e-2335.23Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S0I6B2_9EUKA1.410e-2235.33Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A2D4H7H0_MICLE3.310e-2233.85Uncharacterized protein (Fragment) n=3 Tax=Sauria ... [more]
W4GAN4_9STRA1.130e-2134.03Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A0L0S947_ALLM31.930e-2135.75Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1198contigH-canaliculatus_F_contig1198:5455..7804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.0
Seed ortholog evalue5.4e-126
Seed eggNOG ortholog2880.D8LB66
EggNOG free text desc.positive regulation of phosphorylation of RNA polymerase II C-terminal domain
EggNOG OGsCOG5333@1,KOG0835@2759
COG Functional cat.DKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclin-like
Ec32 orthologEc-27_005020.1
Exons4
Model size1410
Cds size1410
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1198.1729.1prot_H-canaliculatus_F_contig1198.1729.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1198 5455..7804 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928901.6086507-CDS-H-canaliculatus_F_contig1198:5454..58201622928901.6086507-CDS-H-canaliculatus_F_contig1198:5454..5820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 5455..5820 +
1696845607.0630867-CDS-H-canaliculatus_F_contig1198:5454..58201696845607.0630867-CDS-H-canaliculatus_F_contig1198:5454..5820Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 5455..5820 +
1622928901.6271875-CDS-H-canaliculatus_F_contig1198:6396..66031622928901.6271875-CDS-H-canaliculatus_F_contig1198:6396..6603Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 6397..6603 +
1696845607.0742247-CDS-H-canaliculatus_F_contig1198:6396..66031696845607.0742247-CDS-H-canaliculatus_F_contig1198:6396..6603Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 6397..6603 +
1622928901.6423855-CDS-H-canaliculatus_F_contig1198:6835..72171622928901.6423855-CDS-H-canaliculatus_F_contig1198:6835..7217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 6836..7217 +
1696845607.0891216-CDS-H-canaliculatus_F_contig1198:6835..72171696845607.0891216-CDS-H-canaliculatus_F_contig1198:6835..7217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 6836..7217 +
1622928901.655753-CDS-H-canaliculatus_F_contig1198:7349..78041622928901.655753-CDS-H-canaliculatus_F_contig1198:7349..7804Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 7350..7804 +
1696845607.1045601-CDS-H-canaliculatus_F_contig1198:7349..78041696845607.1045601-CDS-H-canaliculatus_F_contig1198:7349..7804Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1198 7350..7804 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1198.1729.1

>prot_H-canaliculatus_F_contig1198.1729.1 ID=prot_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=470bp
WSGRGQRKTVAKAPSFSAHPSLLFSSHELSISPTPRDVLNTKRLCDGRPL
APLGACLLVLLLHTTTLSWRMEIDVGSLRCMAPSLGIPSHRHYDPADVED
AALRLDWAKILFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDV
ILTTCLFLAGKVTEAPRRLRDVINVLHMLTRAQEEPPLLDKAYWTMKERI
VEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLGRATTRTAWGLANDVLF
CPRALSAPPPAVACATIRMAARIHGGERRLRWFSPPLQPTKKTKRRREGD
DGGGGGGGDGGGSGSNGGSVSSRPPPPPPPPPPPPPPPPRAPPYSLNAGS
GLVNGQHYARVPGVSPLAPPPPPPPPPPPHLTHGGVTGQRAADAADEAVA
GARSVSGGDGQAEEQGGEDDDDDRVGADETITMPWWGLFDARDEEVELVC
SELLALYRRHGDGTEGNTQ*
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mRNA from alignment at H-canaliculatus_F_contig1198:5455..7804+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1198.1729.1 ID=mRNA_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2350bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1198:5455..7804+ (Hapterophycus canaliculatus Oshoro5f female)
TGGTCGGGGAGAGGGCAGAGGAAGACCGTCGCTAAGGCTCCTTCGTTCTC TGCGCATCCATCTCTTCTTTTTTCCTCTCACGAGCTCAGCATTTCTCCCA CGCCGCGTGATGTTTTGAACACAAAACGTTTGTGTGACGGAAGACCCCTG GCTCCGTTGGGAGCTTGTCTGTTGGTCCTATTGCTACATACGACGACTCT TAGCTGGAGGATGGAGATTGATGTCGGGTCGCTGCGGTGCATGGCTCCGT CGCTTGGTATCCCTAGTCACAGACACTACGATCCGGCCGATGTCGAGGAT GCTGCCTTGAGGCTGGATTGGGCGAAAATACTTTTTCGAGCGGGCTATCG TCTTCGTTTCCCCCAGGTGAGAGGCAAGCATTGGGTCCTTGAAAGCCGCG CGAGAGTGCTACACAGCAGGAAGCCATGTCTGTCGGGAAGCAGAAACTGT CAATTCGGCAGGTACAGGTTGGAGGAGAACTATCCCAGACCAGCCGGCAA AGTTATGGACCAGTAGATGTATTTGCATGTTAGTAGGGCGCGGAGCACGT ATGGGAGGGGTGTCGGTATCGGCCTTGGCTCCAAAGCTCGCGCTCCTCTC CCACCGTGCCGTCTTTCAGACTTGGGCGCATTAAATCCACCGATGCTGCT CCAAGCAGACAAAAAAACATCGGCTTCGTCGAACATCGCCTTTGGTGACA GATATGACTCGACGTTCCACGCTTTCGTCGTTGACTTAGCCCATCCGCCC TTCTCAACTCCTCTCTTGTTCTCTCCCTCCTGCTCTCTCTCTCTCTCTCT CTCTCCCTCTCTCGTCCTCTCGTATCATCTGTCTTTGTCTCTGTCCTGGT CTCCGTCTCTGTGTCCATGTTTCTGTCCCTCTCTCTTGTCTCTTTTCGTT AATCTCGTGATGTTGGCATGCCAATCGTCGGGGCAAGCACAGGAGACTAC AGGCACAGCCGTGCTGCTGTTCCACCGGTTCCTCATTCAAGAACGCGTGG GCAAGCACCGCCGCAGCCGCGACGTCATCCTGACGACCTGCCTCTTCTTG GCGGGGAAGGTGACGGAGGCCCCCCGCCGCCTGCGCGACGTGATCAACGT CCTACACATGCTGACCCGTGCGCAGGAGGAGCCCCCGCTCCTCGACAAGG TTAGTTTCGCTTCTCACGGTCGCACGACTTTGGCAGACAGCGTATAGTGC TTGGCCCAGATGAAGATAGCATTGCCCAGGAACGAGAACAGTGCAAACCC TTGTGGGAGGCTTTGCGGAGTAGATGCCGCATATATCTCGCACCGCGTTT CCGCGCAGCCGCTAATGCTCCTGACTCCTTGACGCCTCGCTCTCTCCGGA CACGACCTGTCCCGCGTCCGGCGAACTCCAGGCCTACTGGACCATGAAGG AGCGGATCGTGGAGTTCGAGCAGGTCCTTCTGCGCACCATCAACTTCCAG GTGGATCCCCCTGACCCTTACCGCCTGCTGCTCAACTACGCGCGGTCCCT TCGGCTCGGCCGAGCCACGACCCGAACGGCATGGGGCCTGGCCAACGACG TCCTCTTCTGCCCCAGGGCGCTGTCCGCCCCGCCGCCGGCGGTGGCCTGC GCTACTATTCGGATGGCGGCGCGCATCCACGGCGGCGAGCGTCGGCTCCG GTGGTTTTCCCCGCCTCTGCAGCCCACGAAGAAAACAAAACGTCGGAGAG AGGGCGATGACGGCGGCGGCGGCGGCGGTGGTGACGGCGGCGGCAGCGGG AGCAACGGTGGCAGTCGGAAGCGCAAACTGGTGGGAGGGGAGGGGGGAGA AGGTGACCGGCCGATTGCACCGCCTCCACCTCCACCTCCTCCACCCAACG TTGGTTTTGGAGGGGAGTATGGGCAACAGGCTGCAAGGGGAGCAGGCGTC TCGTCGAGGCCACCACCACCACCACCGCCGCCGCCGCCACCTCCGCCGCC ACCACCACGCGCACCGCCTTATTCTCTTAACGCTGGGTCTGGCCTGGTGA ATGGGCAACACTACGCGAGAGTTCCTGGTGTATCGCCGTTGGCACCACCT CCCCCACCACCCCCACCACCTCCTCCCCATCTAACGCACGGAGGGGTGAC CGGGCAACGCGCTGCCGATGCCGCGGACGAAGCTGTTGCTGGCGCGCGTA GCGTCAGCGGTGGCGACGGACAGGCGGAGGAGCAGGGGGGGGAGGACGAC GACGACGACCGCGTCGGCGCCGACGAAACGATAACCATGCCATGGTGGGG GCTGTTCGACGCCCGGGACGAGGAAGTGGAGCTGGTGTGTTCCGAGCTGC TTGCGCTGTACCGACGGCACGGCGATGGTACGGAGGGGAACACACAATAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1198:5455..7804+

>mRNA_H-canaliculatus_F_contig1198.1729.1 ID=mRNA_H-canaliculatus_F_contig1198.1729.1|Name=mRNA_H-canaliculatus_F_contig1198.1729.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2820bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1198:5455..7804+ (Hapterophycus canaliculatus Oshoro5f female)
TGGTCGGGGAGAGGGCAGAGGAAGACCGTCGCTAAGGCTCCTTCGTTCTC
TGCGCATCCATCTCTTCTTTTTTCCTCTCACGAGCTCAGCATTTCTCCCA
CGCCGCGTGATGTTTTGAACACAAAACGTTTGTGTGACGGAAGACCCCTG
GCTCCGTTGGGAGCTTGTCTGTTGGTCCTATTGCTACATACGACGACTCT
TAGCTGGAGGATGGAGATTGATGTCGGGTCGCTGCGGTGCATGGCTCCGT
CGCTTGGTATCCCTAGTCACAGACACTACGATCCGGCCGATGTCGAGGAT
GCTGCCTTGAGGCTGGATTGGGCGAAAATACTTTTTCGAGCGGGCTATCG
TCTTCGTTTCCCCCAGTGGTCGGGGAGAGGGCAGAGGAAGACCGTCGCTA
AGGCTCCTTCGTTCTCTGCGCATCCATCTCTTCTTTTTTCCTCTCACGAG
CTCAGCATTTCTCCCACGCCGCGTGATGTTTTGAACACAAAACGTTTGTG
TGACGGAAGACCCCTGGCTCCGTTGGGAGCTTGTCTGTTGGTCCTATTGC
TACATACGACGACTCTTAGCTGGAGGATGGAGATTGATGTCGGGTCGCTG
CGGTGCATGGCTCCGTCGCTTGGTATCCCTAGTCACAGACACTACGATCC
GGCCGATGTCGAGGATGCTGCCTTGAGGCTGGATTGGGCGAAAATACTTT
TTCGAGCGGGCTATCGTCTTCGTTTCCCCCAGGAGACTACAGGCACAGCC
GTGCTGCTGTTCCACCGGTTCCTCATTCAAGAACGCGTGGGCAAGCACCG
CCGCAGCCGCGACGTCATCCTGACGACCTGCCTCTTCTTGGCGGGGAAGG
TGACGGAGGCCCCCCGCCGCCTGCGCGACGTGATCAACGTCCTACACATG
CTGACCCGTGCGCAGGAGGAGCCCCCGCTCCTCGACAAGGAGACTACAGG
CACAGCCGTGCTGCTGTTCCACCGGTTCCTCATTCAAGAACGCGTGGGCA
AGCACCGCCGCAGCCGCGACGTCATCCTGACGACCTGCCTCTTCTTGGCG
GGGAAGGTGACGGAGGCCCCCCGCCGCCTGCGCGACGTGATCAACGTCCT
ACACATGCTGACCCGTGCGCAGGAGGAGCCCCCGCTCCTCGACAAGGCCT
ACTGGACCATGAAGGAGCGGATCGTGGAGTTCGAGCAGGTCCTTCTGCGC
ACCATCAACTTCCAGGTGGATCCCCCTGACCCTTACCGCCTGCTGCTCAA
CTACGCGCGGTCCCTTCGGCTCGGCCGAGCCACGACCCGAACGGCATGGG
GCCTGGCCAACGACGTCCTCTTCTGCCCCAGGGCGCTGTCCGCCCCGCCG
CCGGCGGTGGCCTGCGCTACTATTCGGATGGCGGCGCGCATCCACGGCGG
CGAGCGTCGGCTCCGGTGGTTTTCCCCGCCTCTGCAGCCCACGAAGAAAA
CAAAACGTCGGAGAGAGGGCGATGACGGCGGCGGCGGCGGCGGTGGTGAC
GGCGGCGGCAGCGGGAGCAACGGTGGCAGCCTACTGGACCATGAAGGAGC
GGATCGTGGAGTTCGAGCAGGTCCTTCTGCGCACCATCAACTTCCAGGTG
GATCCCCCTGACCCTTACCGCCTGCTGCTCAACTACGCGCGGTCCCTTCG
GCTCGGCCGAGCCACGACCCGAACGGCATGGGGCCTGGCCAACGACGTCC
TCTTCTGCCCCAGGGCGCTGTCCGCCCCGCCGCCGGCGGTGGCCTGCGCT
ACTATTCGGATGGCGGCGCGCATCCACGGCGGCGAGCGTCGGCTCCGGTG
GTTTTCCCCGCCTCTGCAGCCCACGAAGAAAACAAAACGTCGGAGAGAGG
GCGATGACGGCGGCGGCGGCGGCGGTGGTGACGGCGGCGGCAGCGGGAGC
AACGGTGGCAGCGTCTCGTCGAGGCCACCACCACCACCACCGCCGCCGCC
GCCACCTCCGCCGCCACCACCACGCGCACCGCCTTATTCTCTTAACGCTG
GGTCTGGCCTGGTGAATGGGCAACACTACGCGAGAGTTCCTGGTGTATCG
CCGTTGGCACCACCTCCCCCACCACCCCCACCACCTCCTCCCCATCTAAC
GCACGGAGGGGTGACCGGGCAACGCGCTGCCGATGCCGCGGACGAAGCTG
TTGCTGGCGCGCGTAGCGTCAGCGGTGGCGACGGACAGGCGGAGGAGCAG
GGGGGGGAGGACGACGACGACGACCGCGTCGGCGCCGACGAAACGATAAC
CATGCCATGGTGGGGGCTGTTCGACGCCCGGGACGAGGAAGTGGAGCTGG
TGTGTTCCGAGCTGCTTGCGCTGTACCGACGGCACGGCGATGGTACGGAG
GGGAACACACAATAAGCGTCTCGTCGAGGCCACCACCACCACCACCGCCG
CCGCCGCCACCTCCGCCGCCACCACCACGCGCACCGCCTTATTCTCTTAA
CGCTGGGTCTGGCCTGGTGAATGGGCAACACTACGCGAGAGTTCCTGGTG
TATCGCCGTTGGCACCACCTCCCCCACCACCCCCACCACCTCCTCCCCAT
CTAACGCACGGAGGGGTGACCGGGCAACGCGCTGCCGATGCCGCGGACGA
AGCTGTTGCTGGCGCGCGTAGCGTCAGCGGTGGCGACGGACAGGCGGAGG
AGCAGGGGGGGGAGGACGACGACGACGACCGCGTCGGCGCCGACGAAACG
ATAACCATGCCATGGTGGGGGCTGTTCGACGCCCGGGACGAGGAAGTGGA
GCTGGTGTGTTCCGAGCTGCTTGCGCTGTACCGACGGCACGGCGATGGTA
CGGAGGGGAACACACAATAA
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