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Homology
BLAST of mRNA_H-canaliculatus_F_contig11970.1724.1 vs. uniprot
Match: D7FZT6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT6_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.180e-47 Identity = 359/536 (66.98%), Postives = 369/536 (68.84%), Query Frame = 1
Query: 4 DQGEWNTATKKXXXXXXXXXXXXXXXX---YANGRGMDDRRGGRGGMADKMRG----GERGSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAANASAEASGGWGAQATKPPLAGGAWTGDGPSVA--AXXXXXAETPDPTSSTPATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGWSGAPGAXXXXXXXSSQAPMAHNGWSSSAEDPVAPASVGXXXXXXXXXXXXXXXXXXXXX---------AAAWAQSNLPATSAWSRGAATIINPKXXXXXXXXXXXXXXXXXXTSSPIQAAPXXXXXXXXXXDPADPAGAESPGLEAVAATPPQTPRLQGSLPSVAEVAAAG--SPAVSSPAVAVSSPSPVARPSXXXXXXXXXXXXXXXXDTSVPAVAXXXXXXXXXXXXXXXXXXXX-GSQLHLQKAQQQDATVASKSTAAPGASASGEGLKMGKWGLSDTIANEESFLSFGQLSFGVPDVGGTDSQTQ 1548
DQGEW TAT XXXXXXXXXXXXXXXX YANGRGMDDRRGGRGGMADKMRG G+RG Y XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS K P AG AWTGDGP+ AXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX QAPMAHNGWSSSA+DPVAP VG XXXXXXXXXXXXX AAAWAQSNLPATSAWSRGAATIINPK XXX XXXXXXX XXXXXXXX P P A SPG EAVAATPPQTPR QGS+PSVAE AAA SPA+ S V XXXXXXXXXXXXXXXX XX GSQLHLQKAQ Q+A+ SK TAA GASA GEGLKMGKWGLSDTIAN+ESFLSFGQLSFGVPDVGG +SQ+Q
Sbjct: 59 DQGEWATATXXXXXXXXXXXXXXXXXXXXXYANGRGMDDRRGGRGGMADKMRGLRLDGDRGGYRGGXXXXXXXXXXSAPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAS-------AKAPAAGSAWTGDGPAAVSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPMAHNGWSSSAQDPVAPGPVGSGSGSLGGXXXXXXXXXXXXXXXXXXXXXXAAAWAQSNLPATSAWSRGAATIINPKPKPVPVXXXVAXXXXXXXXXX------XXXXXXXXAAHPTLPVVA-SPGGEAVAATPPQTPRPQGSMPSVAETAAAAAASPAIGSXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAAPSPVTAAVVTPATAPGSQLHLQKAQAQEASAVSKPTAATGASAPGEGLKMGKWGLSDTIANDESFLSFGQLSFGVPDVGGPESQSQ 580
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 194.5 |
| Seed ortholog evalue | 1.2e-46 |
| Seed eggNOG ortholog | 2880.D7FZT6 |
| EggNOG OGs | 28M4J@1,2QTMG@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-21_002900.1 |
| Exons | 4 |
| Model size | 1548 |
| Cds size | 1548 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928900.9661672-CDS-H-canaliculatus_F_contig11970:793..940 | 1622928900.9661672-CDS-H-canaliculatus_F_contig11970:793..940 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 794..940 - |
| 1696845606.752054-CDS-H-canaliculatus_F_contig11970:793..940 | 1696845606.752054-CDS-H-canaliculatus_F_contig11970:793..940 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 794..940 - |
| 1622928900.9775264-CDS-H-canaliculatus_F_contig11970:1315..2332 | 1622928900.9775264-CDS-H-canaliculatus_F_contig11970:1315..2332 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 1316..2332 - |
| 1696845606.7627203-CDS-H-canaliculatus_F_contig11970:1315..2332 | 1696845606.7627203-CDS-H-canaliculatus_F_contig11970:1315..2332 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 1316..2332 - |
| 1622928900.990414-CDS-H-canaliculatus_F_contig11970:2766..2997 | 1622928900.990414-CDS-H-canaliculatus_F_contig11970:2766..2997 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 2767..2997 - |
| 1696845606.7718828-CDS-H-canaliculatus_F_contig11970:2766..2997 | 1696845606.7718828-CDS-H-canaliculatus_F_contig11970:2766..2997 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 2767..2997 - |
| 1622928901.0073297-CDS-H-canaliculatus_F_contig11970:3457..3610 | 1622928901.0073297-CDS-H-canaliculatus_F_contig11970:3457..3610 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 3458..3610 - |
| 1696845606.7820075-CDS-H-canaliculatus_F_contig11970:3457..3610 | 1696845606.7820075-CDS-H-canaliculatus_F_contig11970:3457..3610 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig11970 3458..3610 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11970.1724.1 >prot_H-canaliculatus_F_contig11970.1724.1 ID=prot_H-canaliculatus_F_contig11970.1724.1|Name=mRNA_H-canaliculatus_F_contig11970.1724.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=516bp
DDQGEWNTATKKKKAPASQQHSRGGGGGYANGRGMDDRRGGRGGMADKMR GGERGSYHNDGGGGGYRGGGGRGRGRSAPPAGGRGGGGGRGGGGSHHSGW GGAPAPGGGGGGGGGAWTGNRSSSIPPQAANASAEASGGWGAQATKPPLA GGAWTGDGPSVAAAASSGAETPDPTSSTPATVPAASGGGGWAAAVGGSAP TSSPGPAAAAAAPSTSGWSGAPGAGAGNGAASSQAPMAHNGWSSSAEDPV APASVGGGGSGSGALGGGAAAPPKEEDAAAWAQSNLPATSAWSRGAATII NPKPKPAPAPAAPPVPPPAPATSSPIQAAPAAAAAAAAAADPADPAGAES PGLEAVAATPPQTPRLQGSLPSVAEVAAAGSPAVSSPAVAVSSPSPVARP SPVAAAAAPPQPVQAPSDTSVPAVAVAVTAAAPSPVTAPAPAAAPGSQLH LQKAQQQDATVASKSTAAPGASASGEGLKMGKWGLSDTIANEESFLSFGQ LSFGVPDVGGTDSQTQ back to topmRNA from alignment at H-canaliculatus_F_contig11970:794..3610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig11970.1724.1 ID=mRNA_H-canaliculatus_F_contig11970.1724.1|Name=mRNA_H-canaliculatus_F_contig11970.1724.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2817bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11970:794..3610- (Hapterophycus canaliculatus Oshoro5f female) GACGACCAGGGCGAGTGGAACACCGCCACCAAGAAGAAGAAGGCCCCTGC
CTCTCAGCAGCACTCTCGCGGCGGCGGCGGCGGCTACGCGAACGGGAGGG
GCATGGACGATCGGAGGGGTGGGCGCGGAGGCATGGCGGACAAGATGCGG
GGGGTGAGAGGCCGTCCCGTTCGCGTCACCCCTGGTCCGCGTCGTGCGCT
GCTGCCGGGCCGTAGCCCGCTGTGGAGTTGCAGCCGACTTTCCGTTTTGA
CTGTTTTGTTGCTCCCGTCGCGGCGTCGGTCTGGAGTCGCAGCCGGGAAG
GATTCGGTTCCGCGACCTCCGCCAAGAGGTTGCTTGTGTGGGGCTCATTT
TGTGCCATTCCGACCGTCCCCACCCCCAGACCCCAGACCCCAGACCCCAC
CCTCGCTGAGACAAGTGTCCGCGTTTGCGTGTGGAGCGGCAGCCTGACGG
GTTGGTGCGTGAGGCAACCCAGGCATCGCCAGAGAAAAGAGCTGCTCGCG
CTGCTCGCCATCCATCGCTGCCTCGGCGCCCAGGGTTCTTGTGCGCTTGG
CCCGGCTGCCTACGATCTCGTAAACCCCTAGTGTCTCTCCCTCTGCATGC
CCCGCCGGCACAGGGTGAACGTGGCTCCTACCACAACGACGGCGGAGGAG
GCGGCTACCGCGGCGGAGGAGGTAGGGGCAGGGGCCGCAGCGCCCCCCCC
GCCGGCGGTCGCGGCGGCGGCGGTGGCCGTGGAGGCGGAGGATCCCACCA
CTCAGGTTGGGGTGGCGCCCCCGCCCCCGGCGGAGGCGGCGGCGGTGGCG
GCGGGGCGTGGACCGGAAACAGGTCGAGTTCAATCCCTCCCCAGGTGAGA
AGCGGGGTCCCGGAGGGAGGAGGGAGGGGGAGGGCGTTGTGTCGAGGTGT
TGGTCCGATCTCACTGTCCCCGCTGAATGGTGTTGTGGTGGGACCGGGTC
GGGGTGTTTGTGGGCGTCGGGCGGCGTGCTTGTCGTCGCGGCTGTCCGTT
TTTCGTCTCGCCAGGAAAACACCGTACACCGCGCCCGACTCGTTCCTCCG
AGAGAGATAGACAGAGAGAGAAAAGAGAGAGAACTGTGCGTCACTTGCCT
AAAGCGCGCGTCCTTTTTTGATGGATCGGACGACGCGGTGTTGCGATTAC
GTAAAGGCGCGCGTCGGTGTTGCGTTGCTGCTGCTGTTCCCGTAGCTAAA
AGGCTTGCCACTCTCGTTGCCGCCCTCGCTGCCGCCCTCGCTGCCTCCCT
GCCGGCGGTTTTTTCTTGCATCTCGCAGGCAGCCAACGCGTCCGCGGAAG
CAAGCGGTGGCTGGGGTGCGCAGGCGACTAAGCCGCCTCTCGCCGGCGGT
GCGTGGACCGGTGATGGGCCCAGCGTAGCCGCCGCCGCCTCTTCGGGGGC
AGAAACTCCCGATCCCACTAGCTCGACCCCCGCGACCGTGCCGGCCGCGT
CCGGCGGCGGCGGTTGGGCGGCGGCGGTGGGAGGCAGCGCGCCGACGTCG
TCGCCGGGACCGGCGGCGGCGGCGGCCGCACCGTCGACTTCAGGCTGGAG
CGGCGCTCCTGGAGCCGGCGCCGGGAACGGAGCCGCTTCGTCCCAGGCCC
CGATGGCGCACAACGGTTGGTCCAGCAGCGCGGAGGACCCCGTAGCCCCG
GCGTCAGTAGGCGGCGGCGGCAGTGGTAGCGGCGCTCTGGGAGGCGGAGC
GGCCGCACCGCCAAAGGAGGAGGACGCGGCCGCCTGGGCGCAGTCGAACC
TGCCAGCGACCTCGGCGTGGAGCCGCGGGGCGGCGACCATCATCAACCCT
AAGCCCAAGCCAGCGCCCGCGCCGGCGGCGCCGCCGGTGCCCCCCCCGGC
GCCGGCGACCTCCTCCCCGATCCAGGCCGCGCCCGCAGCTGCAGCTGCAG
CCGCAGCCGCCGCCGATCCCGCTGATCCCGCCGGCGCGGAGTCGCCCGGG
TTGGAGGCGGTGGCGGCGACGCCGCCGCAGACGCCTCGACTGCAGGGTTC
TCTGCCATCTGTGGCCGAGGTGGCGGCGGCGGGGTCGCCCGCCGTGAGCT
CGCCGGCGGTCGCGGTGAGCTCGCCGTCGCCCGTGGCCCGCCCGTCGCCT
GTGGCTGCCGCCGCCGCGCCACCGCAGCCGGTGCAGGCGCCGAGCGACAC
GTCCGTGCCCGCCGTGGCGGTGGCGGTGACGGCGGCGGCGCCCTCGCCGG
TGACGGCGCCGGCTCCGGCGGCGGCGCCTGGTTCTCAGCTCCACCTCCAG
AAGGCGCAGCAACAGGACGCCACGGTGGCCTCCAAGTCTACGGCGGTGAG
CTTGCCTGGGGGCGTGGGGCCGTCCTTGTGTCCCTGTGTGTCGACGCTCC
CCTCCTTGGTGTCTGTTCTCTTCGGCGGGATGATGCGGCGCGGGGGGGGC
GTCTGCTAGGACCGTCCTGATTTGCTGTGTTGGCTGCTGCCGCCCGGGCG
ATCCGAGCGGGGGCTGCGGGAGGACCCTCTGCAAGCGAGGGCTGGTAGTC
GTCGCCCTCGATTTTGTTGCCTGATGCGCTGCGCATCCGTCCGTCCGTGC
ATCCGCCCGCGAGTCCCACGTCTTTGCCGCCCTCGCTCTCGATCCGAGCT
CCCCCCCCGCTTCCCTCTCCCCGTGTTGGTCGTTTTTGATGTGCTGTGCT
GTGTGTCCTGTGCTGGTAAGGCGCCGGGCGCCTCGGCCTCCGGGGAGGGC
TTGAAGATGGGCAAGTGGGGCCTGAGCGACACGATCGCCAACGAGGAGTC
TTTCTTGAGCTTCGGCCAGCTCTCGTTCGGCGTGCCGGACGTCGGAGGGA
CGGACAGCCAGACTCAG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig11970:794..3610- >mRNA_H-canaliculatus_F_contig11970.1724.1 ID=mRNA_H-canaliculatus_F_contig11970.1724.1|Name=mRNA_H-canaliculatus_F_contig11970.1724.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3096bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11970:794..3610- (Hapterophycus canaliculatus Oshoro5f female) GACGACCAGGGCGAGTGGAACACCGCCACCAAGAAGAAGAAGGCCCCTGC CTCTCAGCAGCACTCTCGCGGCGGCGGCGGCGGCTACGCGAACGGGAGGG GCATGGACGATCGGAGGGGTGGGCGCGGAGGCATGGCGGACAAGATGCGG GGGGACGACCAGGGCGAGTGGAACACCGCCACCAAGAAGAAGAAGGCCCC TGCCTCTCAGCAGCACTCTCGCGGCGGCGGCGGCGGCTACGCGAACGGGA GGGGCATGGACGATCGGAGGGGTGGGCGCGGAGGCATGGCGGACAAGATG CGGGGGGGTGAACGTGGCTCCTACCACAACGACGGCGGAGGAGGCGGCTA CCGCGGCGGAGGAGGTAGGGGCAGGGGCCGCAGCGCCCCCCCCGCCGGCG GTCGCGGCGGCGGCGGTGGCCGTGGAGGCGGAGGATCCCACCACTCAGGT TGGGGTGGCGCCCCCGCCCCCGGCGGAGGCGGCGGCGGTGGCGGCGGGGC GTGGACCGGAAACAGGTCGAGTTCAATCCCTCCCCAGGGTGAACGTGGCT CCTACCACAACGACGGCGGAGGAGGCGGCTACCGCGGCGGAGGAGGTAGG GGCAGGGGCCGCAGCGCCCCCCCCGCCGGCGGTCGCGGCGGCGGCGGTGG CCGTGGAGGCGGAGGATCCCACCACTCAGGTTGGGGTGGCGCCCCCGCCC CCGGCGGAGGCGGCGGCGGTGGCGGCGGGGCGTGGACCGGAAACAGGTCG AGTTCAATCCCTCCCCAGGCAGCCAACGCGTCCGCGGAAGCAAGCGGTGG CTGGGGTGCGCAGGCGACTAAGCCGCCTCTCGCCGGCGGTGCGTGGACCG GTGATGGGCCCAGCGTAGCCGCCGCCGCCTCTTCGGGGGCAGAAACTCCC GATCCCACTAGCTCGACCCCCGCGACCGTGCCGGCCGCGTCCGGCGGCGG CGGTTGGGCGGCGGCGGTGGGAGGCAGCGCGCCGACGTCGTCGCCGGGAC CGGCGGCGGCGGCGGCCGCACCGTCGACTTCAGGCTGGAGCGGCGCTCCT GGAGCCGGCGCCGGGAACGGAGCCGCTTCGTCCCAGGCCCCGATGGCGCA CAACGGTTGGTCCAGCAGCGCGGAGGACCCCGTAGCCCCGGCGTCAGTAG GCGGCGGCGGCAGTGGTAGCGGCGCTCTGGGAGGCGGAGCGGCCGCACCG CCAAAGGAGGAGGACGCGGCCGCCTGGGCGCAGTCGAACCTGCCAGCGAC CTCGGCGTGGAGCCGCGGGGCGGCGACCATCATCAACCCTAAGCCCAAGC CAGCGCCCGCGCCGGCGGCGCCGCCGGTGCCCCCCCCGGCGCCGGCGACC TCCTCCCCGATCCAGGCCGCGCCCGCAGCTGCAGCTGCAGCCGCAGCCGC CGCCGATCCCGCTGATCCCGCCGGCGCGGAGTCGCCCGGGTTGGAGGCGG TGGCGGCGACGCCGCCGCAGACGCCTCGACTGCAGGGTTCTCTGCCATCT GTGGCCGAGGTGGCGGCGGCGGGGTCGCCCGCCGTGAGCTCGCCGGCGGT CGCGGTGAGCTCGCCGTCGCCCGTGGCCCGCCCGTCGCCTGTGGCTGCCG CCGCCGCGCCACCGCAGCCGGTGCAGGCGCCGAGCGACACGTCCGTGCCC GCCGTGGCGGTGGCGGTGACGGCGGCGGCGCCCTCGCCGGTGACGGCGCC GGCTCCGGCGGCGGCGCCTGGTTCTCAGCTCCACCTCCAGAAGGCGCAGC AACAGGACGCCACGGTGGCCTCCAAGTCTACGGCGGCAGCCAACGCGTCC GCGGAAGCAAGCGGTGGCTGGGGTGCGCAGGCGACTAAGCCGCCTCTCGC CGGCGGTGCGTGGACCGGTGATGGGCCCAGCGTAGCCGCCGCCGCCTCTT CGGGGGCAGAAACTCCCGATCCCACTAGCTCGACCCCCGCGACCGTGCCG GCCGCGTCCGGCGGCGGCGGTTGGGCGGCGGCGGTGGGAGGCAGCGCGCC GACGTCGTCGCCGGGACCGGCGGCGGCGGCGGCCGCACCGTCGACTTCAG GCTGGAGCGGCGCTCCTGGAGCCGGCGCCGGGAACGGAGCCGCTTCGTCC CAGGCCCCGATGGCGCACAACGGTTGGTCCAGCAGCGCGGAGGACCCCGT AGCCCCGGCGTCAGTAGGCGGCGGCGGCAGTGGTAGCGGCGCTCTGGGAG GCGGAGCGGCCGCACCGCCAAAGGAGGAGGACGCGGCCGCCTGGGCGCAG TCGAACCTGCCAGCGACCTCGGCGTGGAGCCGCGGGGCGGCGACCATCAT CAACCCTAAGCCCAAGCCAGCGCCCGCGCCGGCGGCGCCGCCGGTGCCCC CCCCGGCGCCGGCGACCTCCTCCCCGATCCAGGCCGCGCCCGCAGCTGCA GCTGCAGCCGCAGCCGCCGCCGATCCCGCTGATCCCGCCGGCGCGGAGTC GCCCGGGTTGGAGGCGGTGGCGGCGACGCCGCCGCAGACGCCTCGACTGC AGGGTTCTCTGCCATCTGTGGCCGAGGTGGCGGCGGCGGGGTCGCCCGCC GTGAGCTCGCCGGCGGTCGCGGTGAGCTCGCCGTCGCCCGTGGCCCGCCC GTCGCCTGTGGCTGCCGCCGCCGCGCCACCGCAGCCGGTGCAGGCGCCGA GCGACACGTCCGTGCCCGCCGTGGCGGTGGCGGTGACGGCGGCGGCGCCC TCGCCGGTGACGGCGCCGGCTCCGGCGGCGGCGCCTGGTTCTCAGCTCCA CCTCCAGAAGGCGCAGCAACAGGACGCCACGGTGGCCTCCAAGTCTACGG CGGCGCCGGGCGCCTCGGCCTCCGGGGAGGGCTTGAAGATGGGCAAGTGG GGCCTGAGCGACACGATCGCCAACGAGGAGTCTTTCTTGAGCTTCGGCCA GCTCTCGTTCGGCGTGCCGGACGTCGGAGGGACGGACAGCCAGACTCAGG CGCCGGGCGCCTCGGCCTCCGGGGAGGGCTTGAAGATGGGCAAGTGGGGC CTGAGCGACACGATCGCCAACGAGGAGTCTTTCTTGAGCTTCGGCCAGCT CTCGTTCGGCGTGCCGGACGTCGGAGGGACGGACAGCCAGACTCAG back to top
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