prot_H-canaliculatus_F_contig1197.1723.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1197.1723.1
Unique Nameprot_H-canaliculatus_F_contig1197.1723.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length48
Homology
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A6H5KBX5_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBX5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.220e-17
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTLSP 45
            MRIDYFL+S  LAPRIKEVKVFG GADR+GFLGSDH PLMLTL P
Sbjct:  348 MRIDYFLLSTVLAPRIKEVKVFGSGADRDGFLGSDHCPLMLTLLP 392          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A516AG33_LINPO (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG33_LINPO)

HSP 1 Score: 63.5 bits (153), Expect = 1.560e-10
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    2 RIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTL 43
            R+DYFL+S++LAPR+   ++ GRGA REGFLGSDH P++L L
Sbjct:  322 RLDYFLLSEALAPRLARCEILGRGAGREGFLGSDHCPVLLEL 363          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: D8TDW8_SELML (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TDW8_SELML)

HSP 1 Score: 63.2 bits (152), Expect = 2.060e-10
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTL 43
            MRIDYFL+SK+L PR+   K+ GRG + EGFLGSDH PL + L
Sbjct:  300 MRIDYFLISKALLPRLASSKIHGRGIELEGFLGSDHCPLTMEL 342          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A812QKL5_SYMPI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QKL5_SYMPI)

HSP 1 Score: 59.3 bits (142), Expect = 4.650e-9
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTLSPSP 47
            MRIDY LV++ +  R++   + G+GADR GFLGSDH PL LTL   P
Sbjct:  253 MRIDYALVAEEILSRLEACDILGQGADRNGFLGSDHCPLRLTLLGGP 299          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: UPI0010A2EE4F (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2EE4F)

HSP 1 Score: 59.3 bits (142), Expect = 4.930e-9
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTLSPSP 47
            MRIDYF+VS+ L  RI   ++ G+G + +GF+GSDH P+ L LSPSP
Sbjct:  305 MRIDYFIVSEKLKDRIVACEMRGQGIELDGFVGSDHCPVTLELSPSP 351          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A7S1K4S8_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K4S8_9ALVE)

HSP 1 Score: 54.7 bits (130), Expect = 2.110e-8
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADR---EGFLGSDHSPLMLTLSPS 46
            MRID+ LVS+SL  R++ V++ G+G  R   EGF+GSDH PL++ L P+
Sbjct:   17 MRIDHILVSESLMGRVESVRITGKGTARGGMEGFMGSDHCPLVVQLRPT 65          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A0D6R9B5_ARACU (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R9B5_ARACU)

HSP 1 Score: 57.4 bits (137), Expect = 2.370e-8
Identity = 26/45 (57.78%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTLSP 45
            MRIDYFLVS     R     + GRG + EGFLGSDH P+ L LSP
Sbjct:  305 MRIDYFLVSNEFKDRTVASNIHGRGIEMEGFLGSDHCPISLELSP 349          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A2V3IW92_9FLOR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW92_9FLOR)

HSP 1 Score: 56.6 bits (135), Expect = 4.510e-8
Identity = 23/43 (53.49%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTL 43
            MRID+ +VS++L P+I+ V + G G +R GF+GSDHSPL+++L
Sbjct:  324 MRIDHCIVSRNLLPKIESVNITGYGVERCGFMGSDHSPLVISL 366          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A812IK21_9DINO (APE1L protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IK21_9DINO)

HSP 1 Score: 56.2 bits (134), Expect = 6.200e-8
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTL 43
            MRIDY LV++ +  R++   + G+GADR GFLGSDH PL  TL
Sbjct:  331 MRIDYALVAEEMLTRLEACDILGQGADRNGFLGSDHCPLRCTL 373          
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Match: A0A812K9S6_9DINO (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812K9S6_9DINO)

HSP 1 Score: 56.2 bits (134), Expect = 6.200e-8
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTL 43
            MRIDY LV++ +  R++   + G+GADR GFLGSDH PL  TL
Sbjct:  333 MRIDYALVAEEMLTRLEACDILGQGADRNGFLGSDHCPLRCTL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1197.1723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KBX5_9PHAE7.220e-1784.44DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A516AG33_LINPO1.560e-1061.90DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
D8TDW8_SELML2.060e-1062.79DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A812QKL5_SYMPI4.650e-955.32DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
UPI0010A2EE4F4.930e-955.32DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S1K4S8_9ALVE2.110e-851.02Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0D6R9B5_ARACU2.370e-857.78DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A2V3IW92_9FLOR4.510e-853.49DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A812IK21_9DINO6.200e-855.81APE1L protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A812K9S6_9DINO6.200e-855.81DNA-(apurinic or apyrimidinic site) endonuclease n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..45
e-value: 6.1E-10
score: 40.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1197contigH-canaliculatus_F_contig1197:28938..29081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1197.1723.1mRNA_H-canaliculatus_F_contig1197.1723.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1197 28938..29090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1197.1723.1 ID=prot_H-canaliculatus_F_contig1197.1723.1|Name=mRNA_H-canaliculatus_F_contig1197.1723.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=48bp
MRIDYFLVSKSLAPRIKEVKVFGRGADREGFLGSDHSPLMLTLSPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf