prot_H-canaliculatus_F_contig11963.1717.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig11963.1717.1
Unique Name	prot_H-canaliculatus_F_contig11963.1717.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	180

Homology

[Close]

BLAST of mRNA_H-canaliculatus_F_contig11963.1717.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 4.460e-16
Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 0

Query:    7 TMLERVEPILSGLETFFAENPNFEALYRSPEGSYIKGPAEIITKALVEGLSPEKFKQDVLLKLRHKGGWKNDPDLVMDTIVDAAKEWRKVEAMQRPP-----AASKDAPRQQGAKSSKQSS--IVCHGCGQKGHYLSQC 138
            T ++R++ +   L  +F ENP  +AL+    G++  GPA++ITK LV GL+P +F++ V   L  +G WK DP+LV D I +AA +WR VE  +R       AA K AP     +  K +   + C  CG+ GH    C
Sbjct:  133 TAVDRIDAVYDKLSVYF-ENPRSKALFCEVNGAFKPGPAQVITKHLVAGLTPPEFRKKVDGILAMRGRWKEDPELVFDLIREAATDWRTVEQFERDRGSQRGAAEKAAPSSAARRKQKSTPGPLTCWTCGEAGHRSGDC 270

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig11963.1717.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig11963.1717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L7F6_9PHAE	4.460e-16	37.41	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 125..138 score: 8.878
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 108..141

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig11963	contig	H-canaliculatus_F_contig11963:1366..1905 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig11963.1717.1	mRNA_H-canaliculatus_F_contig11963.1717.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig11963 1358..1905 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig11963.1717.1 ID=prot_H-canaliculatus_F_contig11963.1717.1|Name=mRNA_H-canaliculatus_F_contig11963.1717.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=180bp
MDRQGTTMLERVEPILSGLETFFAENPNFEALYRSPEGSYIKGPAEIITK
ALVEGLSPEKFKQDVLLKLRHKGGWKNDPDLVMDTIVDAAKEWRKVEAMQ
RPPAASKDAPRQQGAKSSKQSSIVCHGCGQKGHYLSQCSASSGVAQGQSG
GSTSPQQRTRGSRKGNGHNRGGGGSSGGGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036875	Znf_CCHC_sf
IPR001878	Znf_CCHC