prot_H-canaliculatus_F_contig1196.1711.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1196.1711.1
Unique Nameprot_H-canaliculatus_F_contig1196.1711.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length641
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1196.1711.1 vs. uniprot
Match: A0A6H5KUY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.030e-45
Identity = 79/145 (54.48%), Postives = 108/145 (74.48%), Query Frame = 0 
Query:    4 SLLLKRNDAADWVLDRMKATKWKKAPNVGDAALFQFLPGYHACMTVRDSGVQYNEAGKHAAAVRNYRDFAAKAFLQWLDVECEFTSRQRPDWLTMDIMGRNAMGEKILANAKKAGTVGKFFQETEGSLWRSRFQEVAMTVRSDWN 148
            SL+L++N ++DWV++RMK T W   PNVG A+LFQFLPG++A M+V++SG  Y+E+ ++A AV+ Y+ FA  AFL+WL  + +FT+   P WLT DIMGRN+MG KIL  A   GT GK + ETE SLWR+RF +V + +RSDWN
Sbjct:    5 SLMLEKNASSDWVINRMKGTNWGDKPNVGHASLFQFLPGFYAGMSVKESGKCYSESDRNAEAVKVYKSFAVPAFLRWLVEKYDFTTT--PAWLTKDIMGRNSMGPKILLEAANKGTQGKLYDETEASLWRTRFGDVLLALRSDWN 147
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1196.1711.1 vs. uniprot
Match: A0A6H5KB89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB89_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 4.020e-32
Identity = 88/203 (43.35%), Postives = 120/203 (59.11%), Query Frame = 0 
Query:  231 MPVNWVHKHSLIFALLGRPAGVANEHHVLKVVMGSGPDLQGGQNGSGVSSAGALK-------SSAAIKQLKKVGETGAGIPRSRTEKRKESEDDKRQSKRERVQQETTASRDRIVELLENPAENEVDVAIIDYIGEMKEISRRDEERALKADITDRRAAEVQTLKDQTMLYKDMDDAAEVDACRQKLRDLYKTPLPEPEIPLT 426
            MP N+VHK+SLIFAL GRPAG  +E+H L +  GSGPD +                      S A+I+ LKK G TGAGIP SRTE++K+        KRE+  QET      ++ LL+NP E+E D  IID++ EMK+ +R+ + R  K  I + R  EV TL +Q  LYK+M +  +V   R+KL  LY TPLP+ ++P+T
Sbjct:    1 MPANYVHKYSLIFALPGRPAGKQHEYHCLSLESGSGPDGEXXXXXXXXXXXXXXXXXXXXXXSPASIRDLKKQGATGAGIPASRTERKKDXXXXXXXVKREKAAQETKEFNAELLGLLKNPVESEADRVIIDFVREMKKTNRKKDIRLAKKSIQEDRTLEVTTLHEQIALYKEMGNEGQVKETREKLLALYATPLPQLDMPIT 203
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1196.1711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUY0_9PHAE2.030e-4554.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB89_9PHAE4.020e-3243.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1196contigH-canaliculatus_F_contig1196:858..5887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1196.1711.1mRNA_H-canaliculatus_F_contig1196.1711.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1196 839..5887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1196.1711.1 ID=prot_H-canaliculatus_F_contig1196.1711.1|Name=mRNA_H-canaliculatus_F_contig1196.1711.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=641bp
MPESLLLKRNDAADWVLDRMKATKWKKAPNVGDAALFQFLPGYHACMTVR
DSGVQYNEAGKHAAAVRNYRDFAAKAFLQWLDVECEFTSRQRPDWLTMDI
MGRNAMGEKILANAKKAGTVGKFFQETEGSLWRSRFQEVAMTVRSDWNSN
YDRLTQEDGTLNSGEQVDDVMEILHEAMWKLEPKSKKTMKRKESTPVVPA
GEGAEGAAGPQAVAVTPAAEMGDTIEVNVDMPVNWVHKHSLIFALLGRPA
GVANEHHVLKVVMGSGPDLQGGQNGSGVSSAGALKSSAAIKQLKKVGETG
AGIPRSRTEKRKESEDDKRQSKRERVQQETTASRDRIVELLENPAENEVD
VAIIDYIGEMKEISRRDEERALKADITDRRAAEVQTLKDQTMLYKDMDDA
AEVDACRQKLRDLYKTPLPEPEIPLTTARTPRARRGAARSRDTVASVGSS
SKTTDIDLTTDGAAGKECSTLEGNVGGGAGPVDVVGEGHITREEDESDNN
GENPLFDGECFELGPNDLADGEECGDGFEMSPACVAPGAGTTGSNPAVAA
GGNLASACPGAEVVAGVPPGTSEGALATMAGGGADVQLESRLRQPPNDLV
VLSMPVSMQASQTAQSCGARRTSVSSVHQQSTSTAVADGAA
back to top